RNA–Protein interactions for RNA: ENST00000534590.5

PSMD13-214, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-214ENST00000534590 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
PSMD13-214ENST00000534590 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
PSMD13-214ENST00000534590 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
PSMD13-214ENST00000534590 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
PSMD13-214ENST00000534590 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
PSMD13-214ENST00000534590 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
PSMD13-214ENST00000534590 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
PSMD13-214ENST00000534590 SLC16A10Q8TF71 515 aa13.76□□□□□ -0.21
PSMD13-214ENST00000534590 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
PSMD13-214ENST00000534590 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
PSMD13-214ENST00000534590 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
PSMD13-214ENST00000534590 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
PSMD13-214ENST00000534590 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
PSMD13-214ENST00000534590 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
PSMD13-214ENST00000534590 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
PSMD13-214ENST00000534590 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
PSMD13-214ENST00000534590 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
PSMD13-214ENST00000534590 GGNBP2Q9H3C7 697 aa13.73□□□□□ -0.21
PSMD13-214ENST00000534590 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
PSMD13-214ENST00000534590 TESK2Q96S53 571 aa13.72□□□□□ -0.21
PSMD13-214ENST00000534590 NSD2O96028 1365 aa13.71□□□□□ -0.21
PSMD13-214ENST00000534590 MEGF6O75095 1541 aa13.71□□□□□ -0.21
PSMD13-214ENST00000534590 DOT1LQ8TEK3 1739 aa13.71□□□□□ -0.21
PSMD13-214ENST00000534590 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
PSMD13-214ENST00000534590 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
PSMD13-214ENST00000534590 USP47Q96K76 1375 aa13.71□□□□□ -0.22
PSMD13-214ENST00000534590 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
PSMD13-214ENST00000534590 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
PSMD13-214ENST00000534590 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
PSMD13-214ENST00000534590 FYB1O15117 783 aa13.69□□□□□ -0.22
PSMD13-214ENST00000534590 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
PSMD13-214ENST00000534590 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
PSMD13-214ENST00000534590 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
PSMD13-214ENST00000534590 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
PSMD13-214ENST00000534590 SMIM5Q71RC9 77 aa13.68□□□□□ -0.22
PSMD13-214ENST00000534590 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
PSMD13-214ENST00000534590 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
PSMD13-214ENST00000534590 GRIN3BO60391 1043 aa13.66□□□□□ -0.22
PSMD13-214ENST00000534590 LY75O60449 1722 aa13.66□□□□□ -0.22
PSMD13-214ENST00000534590 QSER1Q2KHR3 1735 aa13.66□□□□□ -0.22
PSMD13-214ENST00000534590 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
PSMD13-214ENST00000534590 CLSPNQ9HAW4 1339 aa13.65□□□□□ -0.22
PSMD13-214ENST00000534590 PHF14O94880 888 aa13.65□□□□□ -0.22
PSMD13-214ENST00000534590 TMF1P82094 1093 aa13.65□□□□□ -0.22
PSMD13-214ENST00000534590 ZNF526Q8TF50 670 aaPredicted RBP13.65□□□□□ -0.22
PSMD13-214ENST00000534590 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
PSMD13-214ENST00000534590 GOLGB1Q14789 3259 aaKnown RBP13.64□□□□□ -0.23
PSMD13-214ENST00000534590 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 PALLDQ8WX93 1383 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 CYP27B1O15528 508 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 AK7Q96M32 723 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 PCDH11XQ9BZA7 1347 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 PCDH11YQ9BZA8 1340 aa13.63□□□□□ -0.23
PSMD13-214ENST00000534590 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
PSMD13-214ENST00000534590 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
PSMD13-214ENST00000534590 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
PSMD13-214ENST00000534590 INSRP06213 1382 aa13.6□□□□□ -0.23
PSMD13-214ENST00000534590 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
PSMD13-214ENST00000534590 PIGBQ92521 554 aa13.6□□□□□ -0.23
PSMD13-214ENST00000534590 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
PSMD13-214ENST00000534590 ATP10DQ9P241 1426 aa13.6□□□□□ -0.23
PSMD13-214ENST00000534590 CD2APQ9Y5K6 639 aa13.6□□□□□ -0.23
PSMD13-214ENST00000534590 C5P01031 1676 aa13.59□□□□□ -0.23
PSMD13-214ENST00000534590 FLT4P35916 1363 aa13.59□□□□□ -0.23
PSMD13-214ENST00000534590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
PSMD13-214ENST00000534590 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
PSMD13-214ENST00000534590 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
PSMD13-214ENST00000534590 GPBP1L1Q9HC44 474 aaPredicted RBP13.59□□□□□ -0.23
PSMD13-214ENST00000534590 LINC00116Q8NCU8 138 aa13.57□□□□□ -0.24
PSMD13-214ENST00000534590 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
PSMD13-214ENST00000534590 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
PSMD13-214ENST00000534590 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 GNPATO15228 680 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
PSMD13-214ENST00000534590 SIK1P57059 783 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
PSMD13-214ENST00000534590 ITGB4P16144 1822 aa13.55□□□□□ -0.24
PSMD13-214ENST00000534590 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
PSMD13-214ENST00000534590 ITPK1Q13572 414 aa13.55□□□□□ -0.24
PSMD13-214ENST00000534590 EYA1Q99502 592 aa13.55□□□□□ -0.24
PSMD13-214ENST00000534590 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
PSMD13-214ENST00000534590 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
PSMD13-214ENST00000534590 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
PSMD13-214ENST00000534590 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
PSMD13-214ENST00000534590 MMP10P09238 476 aa13.52□□□□□ -0.25
PSMD13-214ENST00000534590 SSFA2P28290 1259 aa13.52□□□□□ -0.25
PSMD13-214ENST00000534590 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
PSMD13-214ENST00000534590 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.25
PSMD13-214ENST00000534590 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
PSMD13-214ENST00000534590 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.25
PSMD13-214ENST00000534590 UBR3Q6ZT12 1888 aa13.51□□□□□ -0.25
PSMD13-214ENST00000534590 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
PSMD13-214ENST00000534590 PHKG2P15735 406 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms