RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CDCA7Q9BWT1 371 aaPredicted RBP18.98■□□□□ 0.63
VPS11-205ENST00000534551 BTAF1O14981 1849 aa18.95■□□□□ 0.62
VPS11-205ENST00000534551 RAPGEF4Q8WZA2 1011 aa18.95■□□□□ 0.62
VPS11-205ENST00000534551 EXOC5O00471 708 aa18.94■□□□□ 0.62
VPS11-205ENST00000534551 ITGB4P16144 1822 aa18.93■□□□□ 0.62
VPS11-205ENST00000534551 PTF1AQ7RTS3 328 aa18.93■□□□□ 0.62
VPS11-205ENST00000534551 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
VPS11-205ENST00000534551 TRIM37O94972 964 aa18.92■□□□□ 0.62
VPS11-205ENST00000534551 HMOX1P09601 288 aa18.92■□□□□ 0.62
VPS11-205ENST00000534551 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
VPS11-205ENST00000534551 DDX54Q8TDD1 881 aaKnown RBP18.92■□□□□ 0.62
VPS11-205ENST00000534551 KDRP35968 1356 aa18.92■□□□□ 0.62
VPS11-205ENST00000534551 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
VPS11-205ENST00000534551 RREB1Q92766 1687 aa18.9■□□□□ 0.62
VPS11-205ENST00000534551 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
VPS11-205ENST00000534551 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
VPS11-205ENST00000534551 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
VPS11-205ENST00000534551 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.61
VPS11-205ENST00000534551 ACSBG1Q96GR2 724 aa18.89■□□□□ 0.61
VPS11-205ENST00000534551 BCL9O00512 1426 aa18.89■□□□□ 0.61
VPS11-205ENST00000534551 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
VPS11-205ENST00000534551 RALBP1Q15311 655 aa18.88■□□□□ 0.61
VPS11-205ENST00000534551 RGPD3A6NKT7 1758 aaPredicted RBP18.88■□□□□ 0.61
VPS11-205ENST00000534551 RGPD4Q7Z3J3 1758 aa18.88■□□□□ 0.61
VPS11-205ENST00000534551 CYP27B1O15528 508 aa18.87■□□□□ 0.61
VPS11-205ENST00000534551 CFAP53Q96M91 514 aa18.87■□□□□ 0.61
VPS11-205ENST00000534551 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
VPS11-205ENST00000534551 PCDH11XQ9BZA7 1347 aa18.87■□□□□ 0.61
VPS11-205ENST00000534551 PCDH11YQ9BZA8 1340 aa18.87■□□□□ 0.61
VPS11-205ENST00000534551 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
VPS11-205ENST00000534551 SCN11AQ9UI33 1791 aa18.86■□□□□ 0.61
VPS11-205ENST00000534551 KCNQ2O43526 872 aa18.86■□□□□ 0.61
VPS11-205ENST00000534551 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
VPS11-205ENST00000534551 KDM6AO15550 1401 aaPredicted RBP18.83■□□□□ 0.6
VPS11-205ENST00000534551 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
VPS11-205ENST00000534551 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
VPS11-205ENST00000534551 LY75O60449 1722 aa18.82■□□□□ 0.6
VPS11-205ENST00000534551 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
VPS11-205ENST00000534551 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
VPS11-205ENST00000534551 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
VPS11-205ENST00000534551 ADAMTS7Q9UKP4 1686 aa18.8■□□□□ 0.6
VPS11-205ENST00000534551 APBA3O96018 575 aa18.8■□□□□ 0.6
VPS11-205ENST00000534551 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
VPS11-205ENST00000534551 PHKG2P15735 406 aa18.8■□□□□ 0.6
VPS11-205ENST00000534551 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
VPS11-205ENST00000534551 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
VPS11-205ENST00000534551 CCDC125Q86Z20 511 aa18.79■□□□□ 0.6
VPS11-205ENST00000534551 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
VPS11-205ENST00000534551 PRKAR2BP31323 418 aa18.78■□□□□ 0.6
VPS11-205ENST00000534551 BAG6P46379 1132 aa18.78■□□□□ 0.6
VPS11-205ENST00000534551 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
VPS11-205ENST00000534551 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
VPS11-205ENST00000534551 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
VPS11-205ENST00000534551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.6
VPS11-205ENST00000534551 PRIM1P49642 420 aaKnown RBP18.77■□□□□ 0.6
VPS11-205ENST00000534551 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.6
VPS11-205ENST00000534551 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
VPS11-205ENST00000534551 SIPA1L3O60292 1781 aaPredicted RBP18.77■□□□□ 0.6
VPS11-205ENST00000534551 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
VPS11-205ENST00000534551 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
VPS11-205ENST00000534551 PAPPAQ13219 1627 aa18.75■□□□□ 0.59
VPS11-205ENST00000534551 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
VPS11-205ENST00000534551 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
VPS11-205ENST00000534551 NKX1-1Q15270 411 aaPredicted RBP18.74■□□□□ 0.59
VPS11-205ENST00000534551 AMOTQ4VCS5 1084 aa18.74■□□□□ 0.59
VPS11-205ENST00000534551 CAMKK2Q96RR4 588 aa18.74■□□□□ 0.59
VPS11-205ENST00000534551 TAF1LQ8IZX4 1826 aa18.74■□□□□ 0.59
VPS11-205ENST00000534551 MRC1P22897 1456 aa18.73■□□□□ 0.59
VPS11-205ENST00000534551 ANP32CO43423 234 aa18.73■□□□□ 0.59
VPS11-205ENST00000534551 MPRIPQ6WCQ1 1025 aa18.73■□□□□ 0.59
VPS11-205ENST00000534551 C1orf141Q5JVX7 400 aa18.72■□□□□ 0.59
VPS11-205ENST00000534551 C5P01031 1676 aa18.72■□□□□ 0.59
VPS11-205ENST00000534551 MAP3K5Q99683 1374 aa18.7■□□□□ 0.58
VPS11-205ENST00000534551 KCNQ4P56696 695 aa18.69■□□□□ 0.58
VPS11-205ENST00000534551 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
VPS11-205ENST00000534551 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
VPS11-205ENST00000534551 PROM2Q8N271 834 aa18.69■□□□□ 0.58
VPS11-205ENST00000534551 FCHSD2O94868 740 aa18.68■□□□□ 0.58
VPS11-205ENST00000534551 PIGBQ92521 554 aa18.68■□□□□ 0.58
VPS11-205ENST00000534551 DCAF5Q96JK2 942 aa18.68■□□□□ 0.58
VPS11-205ENST00000534551 PLEKHF1Q96S99 279 aa18.68■□□□□ 0.58
VPS11-205ENST00000534551 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
VPS11-205ENST00000534551 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
VPS11-205ENST00000534551 PLSCR1O15162 318 aa18.67■□□□□ 0.58
VPS11-205ENST00000534551 TXNRD1Q16881 649 aa18.67■□□□□ 0.58
VPS11-205ENST00000534551 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
VPS11-205ENST00000534551 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
VPS11-205ENST00000534551 PALLDQ8WX93 1383 aa18.67■□□□□ 0.58
VPS11-205ENST00000534551 TJP1Q07157 1748 aa18.66■□□□□ 0.58
VPS11-205ENST00000534551 HSP90AB1P08238 724 aaKnown RBP18.66■□□□□ 0.58
VPS11-205ENST00000534551 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
VPS11-205ENST00000534551 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
VPS11-205ENST00000534551 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
VPS11-205ENST00000534551 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
VPS11-205ENST00000534551 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
VPS11-205ENST00000534551 MRS2Q9HD23 443 aa18.64■□□□□ 0.57
VPS11-205ENST00000534551 LRRC4BQ9NT99 713 aa18.64■□□□□ 0.57
VPS11-205ENST00000534551 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
VPS11-205ENST00000534551 C4BP0C0L5 1744 aa18.63■□□□□ 0.57
VPS11-205ENST00000534551 CASZ1Q86V15 1759 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 303 ms