RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 NBPF6Q5VWK0 638 aa23.56■■□□□ 1.36
CAPRIN1-216ENST00000534042 AKT1S1Q96B36 256 aa23.56■■□□□ 1.36
CAPRIN1-216ENST00000534042 NBPF4Q96M43 638 aa23.56■■□□□ 1.36
CAPRIN1-216ENST00000534042 ARXQ96QS3 562 aa23.56■■□□□ 1.36
CAPRIN1-216ENST00000534042 MEGF6O75095 1541 aa23.55■■□□□ 1.36
CAPRIN1-216ENST00000534042 DOT1LQ8TEK3 1739 aa23.54■■□□□ 1.36
CAPRIN1-216ENST00000534042 SMG6Q86US8 1419 aaKnown RBP23.54■■□□□ 1.36
CAPRIN1-216ENST00000534042 SHANK3Q9BYB0 1731 aa23.53■■□□□ 1.36
CAPRIN1-216ENST00000534042 SLC16A10Q8TF71 515 aa23.53■■□□□ 1.36
CAPRIN1-216ENST00000534042 RAPGEF4Q8WZA2 1011 aa23.53■■□□□ 1.36
CAPRIN1-216ENST00000534042 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
CAPRIN1-216ENST00000534042 KCNQ4P56696 695 aa23.52■■□□□ 1.36
CAPRIN1-216ENST00000534042 USHBP1Q8N6Y0 703 aa23.52■■□□□ 1.36
CAPRIN1-216ENST00000534042 QSER1Q2KHR3 1735 aa23.51■■□□□ 1.35
CAPRIN1-216ENST00000534042 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
CAPRIN1-216ENST00000534042 KIF20BQ96Q89 1820 aa23.51■■□□□ 1.35
CAPRIN1-216ENST00000534042 NSD2O96028 1365 aa23.51■■□□□ 1.35
CAPRIN1-216ENST00000534042 TATP17735 454 aaPredicted RBP23.5■■□□□ 1.35
CAPRIN1-216ENST00000534042 HSP90AB2PQ58FF8 381 aa23.5■■□□□ 1.35
CAPRIN1-216ENST00000534042 PNPLA7Q6ZV29 1317 aa23.5■■□□□ 1.35
CAPRIN1-216ENST00000534042 LY75O60449 1722 aa23.5■■□□□ 1.35
CAPRIN1-216ENST00000534042 INSRP06213 1382 aa23.49■■□□□ 1.35
CAPRIN1-216ENST00000534042 MAP3K5Q99683 1374 aa23.49■■□□□ 1.35
CAPRIN1-216ENST00000534042 POLD1P28340 1107 aa23.48■■□□□ 1.35
CAPRIN1-216ENST00000534042 CCNL1Q9UK58 526 aaPredicted RBP23.48■■□□□ 1.35
CAPRIN1-216ENST00000534042 FLT4P35916 1363 aa23.48■■□□□ 1.35
CAPRIN1-216ENST00000534042 CHD4Q14839 1912 aa23.47■■□□□ 1.35
CAPRIN1-216ENST00000534042 KIF24Q5T7B8 1368 aa23.47■■□□□ 1.35
CAPRIN1-216ENST00000534042 TUBGCP6Q96RT7 1819 aa23.46■■□□□ 1.35
CAPRIN1-216ENST00000534042 KLHL34Q8N239 644 aa23.45■■□□□ 1.34
CAPRIN1-216ENST00000534042 CARD14Q9BXL6 1004 aa23.45■■□□□ 1.34
CAPRIN1-216ENST00000534042 PCDH11XQ9BZA7 1347 aa23.44■■□□□ 1.34
CAPRIN1-216ENST00000534042 PCDH11YQ9BZA8 1340 aa23.44■■□□□ 1.34
CAPRIN1-216ENST00000534042 TIMELESSQ9UNS1 1208 aa23.43■■□□□ 1.34
CAPRIN1-216ENST00000534042 NSD3Q9BZ95 1437 aa23.42■■□□□ 1.34
CAPRIN1-216ENST00000534042 EMILIN1Q9Y6C2 1016 aa23.42■■□□□ 1.34
CAPRIN1-216ENST00000534042 COL24A1Q17RW2 1714 aa23.42■■□□□ 1.34
CAPRIN1-216ENST00000534042 GPR162Q16538 588 aa23.41■■□□□ 1.34
CAPRIN1-216ENST00000534042 ZNF784Q8NCA9 323 aaPredicted RBP23.41■■□□□ 1.34
CAPRIN1-216ENST00000534042 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
CAPRIN1-216ENST00000534042 MSH5O43196 834 aa23.4■■□□□ 1.34
CAPRIN1-216ENST00000534042 HMGB2P26583 209 aaKnown RBP23.39■■□□□ 1.33
CAPRIN1-216ENST00000534042 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
CAPRIN1-216ENST00000534042 COL23A1Q86Y22 540 aaPredicted RBP23.38■■□□□ 1.33
CAPRIN1-216ENST00000534042 CYP27B1O15528 508 aa23.37■■□□□ 1.33
CAPRIN1-216ENST00000534042 MAP2P11137 1827 aaKnown RBP23.36■■□□□ 1.33
CAPRIN1-216ENST00000534042 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
CAPRIN1-216ENST00000534042 PALLDQ8WX93 1383 aa23.35■■□□□ 1.33
CAPRIN1-216ENST00000534042 ITGB4P16144 1822 aa23.34■■□□□ 1.33
CAPRIN1-216ENST00000534042 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
CAPRIN1-216ENST00000534042 C5P01031 1676 aa23.34■■□□□ 1.33
CAPRIN1-216ENST00000534042 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
CAPRIN1-216ENST00000534042 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.33
CAPRIN1-216ENST00000534042 POLR3GLQ9BT43 218 aa23.33■■□□□ 1.33
CAPRIN1-216ENST00000534042 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
CAPRIN1-216ENST00000534042 SPG7Q9UQ90 795 aa23.33■■□□□ 1.33
CAPRIN1-216ENST00000534042 TAF1LQ8IZX4 1826 aa23.33■■□□□ 1.32
CAPRIN1-216ENST00000534042 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
CAPRIN1-216ENST00000534042 FLAD1Q8NFF5 587 aa23.32■■□□□ 1.32
CAPRIN1-216ENST00000534042 NLGN2Q8NFZ4 835 aa23.32■■□□□ 1.32
CAPRIN1-216ENST00000534042 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
CAPRIN1-216ENST00000534042 ANKRD26Q9UPS8 1709 aa23.31■■□□□ 1.32
CAPRIN1-216ENST00000534042 MSL1Q68DK7 614 aa23.31■■□□□ 1.32
CAPRIN1-216ENST00000534042 EYA1Q99502 592 aa23.31■■□□□ 1.32
CAPRIN1-216ENST00000534042 TOGARAM1Q9Y4F4 1720 aa23.3■■□□□ 1.32
CAPRIN1-216ENST00000534042 NKX1-1Q15270 411 aaPredicted RBP23.3■■□□□ 1.32
CAPRIN1-216ENST00000534042 PIGBQ92521 554 aa23.29■■□□□ 1.32
CAPRIN1-216ENST00000534042 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
CAPRIN1-216ENST00000534042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.28■■□□□ 1.326e-8■■□□□ 14.3
CAPRIN1-216ENST00000534042 AK7Q96M32 723 aa23.27■■□□□ 1.32
CAPRIN1-216ENST00000534042 UTRNP46939 3433 aa23.26■■□□□ 1.31
CAPRIN1-216ENST00000534042 C4BP0C0L5 1744 aa23.25■■□□□ 1.31
CAPRIN1-216ENST00000534042 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
CAPRIN1-216ENST00000534042 GRIN3BO60391 1043 aa23.24■■□□□ 1.31
CAPRIN1-216ENST00000534042 IFNL2Q8IZJ0 200 aa23.24■■□□□ 1.31
CAPRIN1-216ENST00000534042 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
CAPRIN1-216ENST00000534042 LOC102724428A0A0B4J2F2 783 aa23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 PHKG2P15735 406 aa23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 YBX3P16989 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 SIK1P57059 783 aa23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 EIF4G2P78344 907 aaKnown RBP eCLIP23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 EIF4A2Q14240 407 aaKnown RBP23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 CD2APQ9Y5K6 639 aa23.22■■□□□ 1.31
CAPRIN1-216ENST00000534042 PHF14O94880 888 aa23.21■■□□□ 1.31
CAPRIN1-216ENST00000534042 UBR3Q6ZT12 1888 aa23.21■■□□□ 1.31
CAPRIN1-216ENST00000534042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.2■■□□□ 1.3
CAPRIN1-216ENST00000534042 AMIGO3Q86WK7 504 aa23.2■■□□□ 1.3
CAPRIN1-216ENST00000534042 ASAP1Q9ULH1 1129 aa23.2■■□□□ 1.3
CAPRIN1-216ENST00000534042 HSPA5P11021 654 aaKnown RBP23.19■■□□□ 1.3
CAPRIN1-216ENST00000534042 LINC00116Q8NCU8 138 aa23.19■■□□□ 1.3
CAPRIN1-216ENST00000534042 PANK3Q9H999 370 aa23.19■■□□□ 1.3
CAPRIN1-216ENST00000534042 SSFA2P28290 1259 aa23.18■■□□□ 1.3
CAPRIN1-216ENST00000534042 C1QTNF8P60827 252 aa23.18■■□□□ 1.3
CAPRIN1-216ENST00000534042 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
CAPRIN1-216ENST00000534042 ATP6V1AP38606 617 aa23.17■■□□□ 1.3
CAPRIN1-216ENST00000534042 PLEKHG2Q9H7P9 1386 aa23.16■■□□□ 1.3
CAPRIN1-216ENST00000534042 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
CAPRIN1-216ENST00000534042 ITPK1Q13572 414 aa23.15■■□□□ 1.3
CAPRIN1-216ENST00000534042 ATG3Q9NT62 314 aa23.15■■□□□ 1.3
CAPRIN1-216ENST00000534042 GNPATO15228 680 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms