RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 TATP17735 454 aaPredicted RBP22.05■■□□□ 1.12
MRPL49-208ENST00000533943 NBPF14Q5TI25 921 aa22.05■■□□□ 1.12
MRPL49-208ENST00000533943 PER1O15534 1290 aaPredicted RBP22.04■■□□□ 1.12
MRPL49-208ENST00000533943 NCAPD2Q15021 1401 aa22.04■■□□□ 1.12
MRPL49-208ENST00000533943 RREB1Q92766 1687 aa22.04■■□□□ 1.12
MRPL49-208ENST00000533943 PROM2Q8N271 834 aa22.03■■□□□ 1.12
MRPL49-208ENST00000533943 EYA1Q99502 592 aa22.03■■□□□ 1.12
MRPL49-208ENST00000533943 RGPD3A6NKT7 1758 aaPredicted RBP22.02■■□□□ 1.12
MRPL49-208ENST00000533943 RGPD4Q7Z3J3 1758 aa22.02■■□□□ 1.12
MRPL49-208ENST00000533943 MAP2P11137 1827 aaKnown RBP22.01■■□□□ 1.11
MRPL49-208ENST00000533943 NHSQ6T4R5 1651 aa22.01■■□□□ 1.11
MRPL49-208ENST00000533943 EIF4A2Q14240 407 aaKnown RBP22.01■■□□□ 1.11
MRPL49-208ENST00000533943 TXNRD1Q16881 649 aa22■■□□□ 1.11
MRPL49-208ENST00000533943 NUP188Q5SRE5 1749 aa21.99■■□□□ 1.11
MRPL49-208ENST00000533943 PCDH11XQ9BZA7 1347 aa21.98■■□□□ 1.11
MRPL49-208ENST00000533943 PCDH11YQ9BZA8 1340 aa21.98■■□□□ 1.11
MRPL49-208ENST00000533943 PRIM1P49642 420 aaKnown RBP21.97■■□□□ 1.11
MRPL49-208ENST00000533943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
MRPL49-208ENST00000533943 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
MRPL49-208ENST00000533943 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.1
MRPL49-208ENST00000533943 CYP27B1O15528 508 aa21.94■■□□□ 1.1
MRPL49-208ENST00000533943 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
MRPL49-208ENST00000533943 ANO8Q9HCE9 1232 aaPredicted RBP21.94■■□□□ 1.1
MRPL49-208ENST00000533943 SPG7Q9UQ90 795 aa21.94■■□□□ 1.1
MRPL49-208ENST00000533943 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
MRPL49-208ENST00000533943 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
MRPL49-208ENST00000533943 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
MRPL49-208ENST00000533943 BTAF1O14981 1849 aa21.9■■□□□ 1.1
MRPL49-208ENST00000533943 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
MRPL49-208ENST00000533943 LRP5O75197 1615 aa21.89■■□□□ 1.09
MRPL49-208ENST00000533943 MTHFSP49914 203 aa21.89■■□□□ 1.09
MRPL49-208ENST00000533943 SLC27A3Q5K4L6 730 aa21.89■■□□□ 1.09
MRPL49-208ENST00000533943 STK32BQ9NY57 414 aa21.89■■□□□ 1.09
MRPL49-208ENST00000533943 PKD1L3Q7Z443 1732 aa21.89■■□□□ 1.09
MRPL49-208ENST00000533943 IL13P35225 146 aa21.88■■□□□ 1.09
MRPL49-208ENST00000533943 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
MRPL49-208ENST00000533943 LRRC4BQ9NT99 713 aa21.87■■□□□ 1.09
MRPL49-208ENST00000533943 KAT6BQ8WYB5 2073 aa21.87■■□□□ 1.09
MRPL49-208ENST00000533943 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
MRPL49-208ENST00000533943 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
MRPL49-208ENST00000533943 PHKG2P15735 406 aa21.85■■□□□ 1.09
MRPL49-208ENST00000533943 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
MRPL49-208ENST00000533943 AMOTQ4VCS5 1084 aa21.83■■□□□ 1.09
MRPL49-208ENST00000533943 PLEKHO1Q53GL0 409 aaPredicted RBP21.83■■□□□ 1.09
MRPL49-208ENST00000533943 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
MRPL49-208ENST00000533943 MPRIPQ6WCQ1 1025 aa21.83■■□□□ 1.09
MRPL49-208ENST00000533943 KDRP35968 1356 aa21.83■■□□□ 1.08
MRPL49-208ENST00000533943 SPON1Q9HCB6 807 aa21.82■■□□□ 1.08
MRPL49-208ENST00000533943 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
MRPL49-208ENST00000533943 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
MRPL49-208ENST00000533943 DIAPH1O60610 1272 aaKnown RBP21.8■■□□□ 1.08
MRPL49-208ENST00000533943 ZNF827Q17R98 1081 aa21.8■■□□□ 1.08
MRPL49-208ENST00000533943 PIGBQ92521 554 aa21.8■■□□□ 1.08
MRPL49-208ENST00000533943 AKT1S1Q96B36 256 aa21.8■■□□□ 1.08
MRPL49-208ENST00000533943 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
MRPL49-208ENST00000533943 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
MRPL49-208ENST00000533943 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
MRPL49-208ENST00000533943 SMARCC1Q92922 1105 aaPredicted RBP21.79■■□□□ 1.08
MRPL49-208ENST00000533943 KCNQ4P56696 695 aa21.78■■□□□ 1.08
MRPL49-208ENST00000533943 ZNF530Q6P9A1 599 aaPredicted RBP21.78■■□□□ 1.08
MRPL49-208ENST00000533943 PALLDQ8WX93 1383 aa21.77■■□□□ 1.08
MRPL49-208ENST00000533943 HMGB2P26583 209 aaKnown RBP21.77■■□□□ 1.08
MRPL49-208ENST00000533943 DCAF5Q96JK2 942 aa21.77■■□□□ 1.08
MRPL49-208ENST00000533943 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
MRPL49-208ENST00000533943 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
MRPL49-208ENST00000533943 LY75O60449 1722 aa21.76■■□□□ 1.07
MRPL49-208ENST00000533943 CASZ1Q86V15 1759 aa21.76■■□□□ 1.07
MRPL49-208ENST00000533943 ERVV-2B6SEH9 535 aa21.75■■□□□ 1.07
MRPL49-208ENST00000533943 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
MRPL49-208ENST00000533943 COL3A1P02461 1466 aaPredicted RBP21.73■■□□□ 1.07
MRPL49-208ENST00000533943 HMOX1P09601 288 aa21.73■■□□□ 1.07
MRPL49-208ENST00000533943 C1orf141Q5JVX7 400 aa21.73■■□□□ 1.07
MRPL49-208ENST00000533943 MTFR1LQ9H019 292 aa21.73■■□□□ 1.07
MRPL49-208ENST00000533943 TFCP2L1Q9NZI6 479 aa21.73■■□□□ 1.07
MRPL49-208ENST00000533943 CFAP53Q96M91 514 aa21.71■■□□□ 1.07
MRPL49-208ENST00000533943 PPP1R1BQ9UD71 204 aaPredicted RBP21.71■■□□□ 1.07
MRPL49-208ENST00000533943 ASAP1Q9ULH1 1129 aa21.71■■□□□ 1.07
MRPL49-208ENST00000533943 ATF5Q9Y2D1 282 aaPredicted RBP21.71■■□□□ 1.07
MRPL49-208ENST00000533943 ITGB4P16144 1822 aa21.71■■□□□ 1.07
MRPL49-208ENST00000533943 KDM6AO15550 1401 aaPredicted RBP21.71■■□□□ 1.07
MRPL49-208ENST00000533943 PPP2R1AP30153 589 aa21.7■■□□□ 1.06
MRPL49-208ENST00000533943 PTGER2P43116 358 aa21.7■■□□□ 1.06
MRPL49-208ENST00000533943 LOC102724428A0A0B4J2F2 783 aa21.69■■□□□ 1.06
MRPL49-208ENST00000533943 SIK1P57059 783 aa21.69■■□□□ 1.06
MRPL49-208ENST00000533943 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
MRPL49-208ENST00000533943 SLC16A10Q8TF71 515 aa21.69■■□□□ 1.06
MRPL49-208ENST00000533943 ATG3Q9NT62 314 aa21.69■■□□□ 1.06
MRPL49-208ENST00000533943 PNPLA7Q6ZV29 1317 aa21.69■■□□□ 1.06
MRPL49-208ENST00000533943 U2SURPO15042 1029 aaKnown RBP21.68■■□□□ 1.06
MRPL49-208ENST00000533943 CABP4P57796 275 aa21.68■■□□□ 1.06
MRPL49-208ENST00000533943 SGIP1Q9BQI5 828 aa21.67■■□□□ 1.06
MRPL49-208ENST00000533943 MTHFSDQ2M296 383 aaKnown RBP21.65■■□□□ 1.06
MRPL49-208ENST00000533943 NUDCQ9Y266 331 aa21.65■■□□□ 1.06
MRPL49-208ENST00000533943 QSER1Q2KHR3 1735 aa21.63■■□□□ 1.05
MRPL49-208ENST00000533943 COL23A1Q86Y22 540 aaPredicted RBP21.63■■□□□ 1.05
MRPL49-208ENST00000533943 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
MRPL49-208ENST00000533943 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
MRPL49-208ENST00000533943 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
MRPL49-208ENST00000533943 ITPK1Q13572 414 aa21.62■■□□□ 1.05
MRPL49-208ENST00000533943 LINC00116Q8NCU8 138 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms