RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CENPBP07199 599 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-218ENST00000533761 GGNBP2Q9H3C7 697 aa14.68□□□□□ -0.06
CCDC90B-218ENST00000533761 PIK3C2AO00443 1686 aa14.68□□□□□ -0.06
CCDC90B-218ENST00000533761 SPATA31A6Q5VVP1 1343 aa14.68□□□□□ -0.06
CCDC90B-218ENST00000533761 MORC1Q86VD1 984 aa14.68□□□□□ -0.06
CCDC90B-218ENST00000533761 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
CCDC90B-218ENST00000533761 SHPRHQ149N8 1683 aa14.67□□□□□ -0.06
CCDC90B-218ENST00000533761 CABLES1Q8TDN4 633 aa14.67□□□□□ -0.06
CCDC90B-218ENST00000533761 GCP02774 474 aa14.66□□□□□ -0.06
CCDC90B-218ENST00000533761 USP19O94966 1318 aa14.66□□□□□ -0.06
CCDC90B-218ENST00000533761 COL22A1Q8NFW1 1626 aaPredicted RBP14.66□□□□□ -0.06
CCDC90B-218ENST00000533761 KIF20BQ96Q89 1820 aa14.66□□□□□ -0.06
CCDC90B-218ENST00000533761 OVOS2A0A0J9YW53 1432 aa14.65□□□□□ -0.06
CCDC90B-218ENST00000533761 OVOS2Q6IE36 1432 aa14.65□□□□□ -0.06
CCDC90B-218ENST00000533761 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
CCDC90B-218ENST00000533761 MED1Q15648 1581 aaPredicted RBP14.65□□□□□ -0.06
CCDC90B-218ENST00000533761 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-218ENST00000533761 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-218ENST00000533761 PDAP1Q13442 181 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-218ENST00000533761 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-218ENST00000533761 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-218ENST00000533761 USP54Q70EL1 1684 aa14.63□□□□□ -0.07
CCDC90B-218ENST00000533761 SOX12O15370 315 aa14.63□□□□□ -0.07
CCDC90B-218ENST00000533761 PPP2R1AP30153 589 aa14.63□□□□□ -0.07
CCDC90B-218ENST00000533761 ANKRD26Q9UPS8 1709 aa14.62□□□□□ -0.07
CCDC90B-218ENST00000533761 MYT1Q01538 1121 aa14.62□□□□□ -0.07
CCDC90B-218ENST00000533761 SLIT3O75094 1523 aa14.61□□□□□ -0.07
CCDC90B-218ENST00000533761 CFAP53Q96M91 514 aa14.61□□□□□ -0.07
CCDC90B-218ENST00000533761 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-218ENST00000533761 ADAMTS2O95450 1211 aa14.6□□□□□ -0.07
CCDC90B-218ENST00000533761 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-218ENST00000533761 PHRF1Q9P1Y6 1649 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-218ENST00000533761 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
CCDC90B-218ENST00000533761 FAM9BQ8IZU0 186 aa14.6□□□□□ -0.07
CCDC90B-218ENST00000533761 PRDM11Q9NQV5 511 aa14.6□□□□□ -0.07
CCDC90B-218ENST00000533761 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
CCDC90B-218ENST00000533761 CPDO75976 1380 aa14.59□□□□□ -0.07
CCDC90B-218ENST00000533761 WDR43Q15061 677 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC90B-218ENST00000533761 MEX3CQ5U5Q3 659 aaKnown RBP14.59□□□□□ -0.07
CCDC90B-218ENST00000533761 INSRP06213 1382 aa14.59□□□□□ -0.07
CCDC90B-218ENST00000533761 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
CCDC90B-218ENST00000533761 ABCA3Q99758 1704 aa14.58□□□□□ -0.08
CCDC90B-218ENST00000533761 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
CCDC90B-218ENST00000533761 KIAA0232Q92628 1395 aa14.58□□□□□ -0.08
CCDC90B-218ENST00000533761 NFAT5O94916 1531 aa14.57□□□□□ -0.08
CCDC90B-218ENST00000533761 ANKRD13DQ6ZTN6 518 aa14.57□□□□□ -0.08
CCDC90B-218ENST00000533761 PNISRQ8TF01 805 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-218ENST00000533761 ZBTB7CA1YPR0 619 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 FBLN1P23142 703 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 AMPHP49418 695 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 NGLY1Q96IV0 654 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 C8orf37Q96NL8 207 aa14.56□□□□□ -0.08
CCDC90B-218ENST00000533761 LRP6O75581 1613 aa14.55□□□□□ -0.08
CCDC90B-218ENST00000533761 KIF24Q5T7B8 1368 aa14.55□□□□□ -0.08
CCDC90B-218ENST00000533761 PPM1GO15355 546 aaPredicted RBP14.55□□□□□ -0.08
CCDC90B-218ENST00000533761 CHRNA2Q15822 529 aa14.55□□□□□ -0.08
CCDC90B-218ENST00000533761 GPR153Q6NV75 609 aa14.55□□□□□ -0.08
CCDC90B-218ENST00000533761 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
CCDC90B-218ENST00000533761 MAP2P11137 1827 aaKnown RBP14.53□□□□□ -0.08
CCDC90B-218ENST00000533761 HNRNPUQ00839 825 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC90B-218ENST00000533761 IP6K1Q92551 441 aa14.53□□□□□ -0.08
CCDC90B-218ENST00000533761 LTN1O94822 1766 aa14.53□□□□□ -0.08
CCDC90B-218ENST00000533761 MTHFSP49914 203 aa14.52□□□□□ -0.08
CCDC90B-218ENST00000533761 FNBP4Q8N3X1 1017 aaPredicted RBP14.52□□□□□ -0.08
CCDC90B-218ENST00000533761 PLA2G2EQ9NZK7 142 aa14.52□□□□□ -0.08
CCDC90B-218ENST00000533761 NUDCQ9Y266 331 aa14.52□□□□□ -0.08
CCDC90B-218ENST00000533761 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.08
CCDC90B-218ENST00000533761 COL14A1Q05707 1796 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-218ENST00000533761 RTL1A6NKG5 1358 aa14.52□□□□□ -0.09
CCDC90B-218ENST00000533761 FLT4P35916 1363 aa14.52□□□□□ -0.09
CCDC90B-218ENST00000533761 HOXC9P31274 260 aa14.51□□□□□ -0.09
CCDC90B-218ENST00000533761 BTG4Q9NY30 223 aa14.51□□□□□ -0.09
CCDC90B-218ENST00000533761 EVA1CP58658 441 aa14.51□□□□□ -0.09
CCDC90B-218ENST00000533761 ABCC6O95255 1503 aa14.5□□□□□ -0.09
CCDC90B-218ENST00000533761 BLMP54132 1417 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-218ENST00000533761 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
CCDC90B-218ENST00000533761 HSP90AB2PQ58FF8 381 aa14.49□□□□□ -0.09
CCDC90B-218ENST00000533761 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
CCDC90B-218ENST00000533761 USP21Q9UK80 565 aa14.49□□□□□ -0.09
CCDC90B-218ENST00000533761 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-218ENST00000533761 SLIT2O94813 1529 aa14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 UNC5CLQ8IV45 518 aa14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 PNNQ9H307 717 aaKnown RBP14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 AFF2P51816 1311 aa14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 CAMTA1Q9Y6Y1 1673 aa14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 COL18A1P39060 1754 aa14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 CDK12Q9NYV4 1490 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-218ENST00000533761 LMO7Q8WWI1 1683 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 STRN4Q9NRL3 753 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 NWD2Q9ULI1 1742 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 ZBED9Q6R2W3 1325 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 PLCH1Q4KWH8 1693 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 ZNF772Q68DY9 489 aaPredicted RBP14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 NGEFQ8N5V2 710 aa14.47□□□□□ -0.09
CCDC90B-218ENST00000533761 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms