RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 KCNQ4P56696 695 aa13.36□□□□□ -0.27
PACS1-213ENST00000533756 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
PACS1-213ENST00000533756 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
PACS1-213ENST00000533756 PRDM10Q9NQV6 1147 aa13.36□□□□□ -0.27
PACS1-213ENST00000533756 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
PACS1-213ENST00000533756 CPSF1Q10570 1443 aaKnown RBP13.35□□□□□ -0.27
PACS1-213ENST00000533756 C10orf71Q711Q0 1435 aa13.35□□□□□ -0.27
PACS1-213ENST00000533756 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
PACS1-213ENST00000533756 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
PACS1-213ENST00000533756 IL2RBP14784 551 aa13.33□□□□□ -0.28
PACS1-213ENST00000533756 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
PACS1-213ENST00000533756 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
PACS1-213ENST00000533756 KCNH5Q8NCM2 988 aa13.32□□□□□ -0.28
PACS1-213ENST00000533756 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
PACS1-213ENST00000533756 RGS19P49795 217 aa13.3□□□□□ -0.28
PACS1-213ENST00000533756 RRAGCQ9HB90 399 aa13.3□□□□□ -0.28
PACS1-213ENST00000533756 PIK3C2AO00443 1686 aa13.29□□□□□ -0.28
PACS1-213ENST00000533756 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
PACS1-213ENST00000533756 LY75O60449 1722 aa13.29□□□□□ -0.28
PACS1-213ENST00000533756 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
PACS1-213ENST00000533756 ABHD8Q96I13 439 aa13.28□□□□□ -0.28
PACS1-213ENST00000533756 FOXN1O15353 648 aa13.27□□□□□ -0.29
PACS1-213ENST00000533756 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
PACS1-213ENST00000533756 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
PACS1-213ENST00000533756 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
PACS1-213ENST00000533756 ANKRD36BQ8N2N9 1353 aa13.27□□□□□ -0.29
PACS1-213ENST00000533756 RGPD5Q99666 1765 aa13.27□□□□□ -0.29
PACS1-213ENST00000533756 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
PACS1-213ENST00000533756 TGFB2P61812 414 aa13.26□□□□□ -0.29
PACS1-213ENST00000533756 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
PACS1-213ENST00000533756 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
PACS1-213ENST00000533756 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
PACS1-213ENST00000533756 NLRP2Q9NX02 1062 aa13.26□□□□□ -0.29
PACS1-213ENST00000533756 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
PACS1-213ENST00000533756 DDX54Q8TDD1 881 aaKnown RBP13.25□□□□□ -0.29
PACS1-213ENST00000533756 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
PACS1-213ENST00000533756 NSD2O96028 1365 aa13.23□□□□□ -0.29
PACS1-213ENST00000533756 USP47Q96K76 1375 aa13.23□□□□□ -0.29
PACS1-213ENST00000533756 ERBB3P21860 1342 aa13.23□□□□□ -0.29
PACS1-213ENST00000533756 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
PACS1-213ENST00000533756 SOX12O15370 315 aa13.21□□□□□ -0.29
PACS1-213ENST00000533756 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
PACS1-213ENST00000533756 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
PACS1-213ENST00000533756 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
PACS1-213ENST00000533756 USP54Q70EL1 1684 aa13.21□□□□□ -0.3
PACS1-213ENST00000533756 FCHSD2O94868 740 aa13.2□□□□□ -0.3
PACS1-213ENST00000533756 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
PACS1-213ENST00000533756 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
PACS1-213ENST00000533756 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
PACS1-213ENST00000533756 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
PACS1-213ENST00000533756 NFAT5O94916 1531 aa13.18□□□□□ -0.3
PACS1-213ENST00000533756 AK7Q96M32 723 aa13.18□□□□□ -0.3
PACS1-213ENST00000533756 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
PACS1-213ENST00000533756 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
PACS1-213ENST00000533756 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
PACS1-213ENST00000533756 C5P01031 1676 aa13.18□□□□□ -0.3
PACS1-213ENST00000533756 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
PACS1-213ENST00000533756 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
PACS1-213ENST00000533756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
PACS1-213ENST00000533756 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
PACS1-213ENST00000533756 LBX1P52954 281 aa13.17□□□□□ -0.3
PACS1-213ENST00000533756 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
PACS1-213ENST00000533756 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
PACS1-213ENST00000533756 TTC21BQ7Z4L5 1316 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 QRICH2Q9H0J4 1663 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 SSFA2P28290 1259 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
PACS1-213ENST00000533756 TTC21AQ8NDW8 1320 aa13.15□□□□□ -0.3
PACS1-213ENST00000533756 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
PACS1-213ENST00000533756 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
PACS1-213ENST00000533756 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
PACS1-213ENST00000533756 PHF14O94880 888 aa13.14□□□□□ -0.31
PACS1-213ENST00000533756 MMP10P09238 476 aa13.14□□□□□ -0.31
PACS1-213ENST00000533756 DPEP1P16444 411 aa13.14□□□□□ -0.31
PACS1-213ENST00000533756 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
PACS1-213ENST00000533756 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
PACS1-213ENST00000533756 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
PACS1-213ENST00000533756 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
PACS1-213ENST00000533756 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
PACS1-213ENST00000533756 GLTPD2A6NH11 291 aa13.13□□□□□ -0.31
PACS1-213ENST00000533756 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
PACS1-213ENST00000533756 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
PACS1-213ENST00000533756 PIM2Q9P1W9 311 aa13.12□□□□□ -0.31
PACS1-213ENST00000533756 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
PACS1-213ENST00000533756 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
PACS1-213ENST00000533756 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
PACS1-213ENST00000533756 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
PACS1-213ENST00000533756 KCNA3P22001 575 aa13.11□□□□□ -0.31
PACS1-213ENST00000533756 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
PACS1-213ENST00000533756 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
PACS1-213ENST00000533756 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
PACS1-213ENST00000533756 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
PACS1-213ENST00000533756 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
PACS1-213ENST00000533756 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
PACS1-213ENST00000533756 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
PACS1-213ENST00000533756 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.32
PACS1-213ENST00000533756 VEGFBP49765 207 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms