RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 SHANK3Q9BYB0 1731 aa16.29■□□□□ 0.2
NUCB2-216ENST00000533738 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
NUCB2-216ENST00000533738 KCNQ2O43526 872 aa16.29■□□□□ 0.2
NUCB2-216ENST00000533738 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
NUCB2-216ENST00000533738 ACSBG1Q96GR2 724 aa16.29■□□□□ 0.2
NUCB2-216ENST00000533738 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
NUCB2-216ENST00000533738 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
NUCB2-216ENST00000533738 ZCRB1Q8TBF4 217 aaKnown RBP16.28■□□□□ 0.2
NUCB2-216ENST00000533738 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
NUCB2-216ENST00000533738 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
NUCB2-216ENST00000533738 PLSCR1O15162 318 aa16.27■□□□□ 0.2
NUCB2-216ENST00000533738 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
NUCB2-216ENST00000533738 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
NUCB2-216ENST00000533738 EYA1Q99502 592 aa16.26■□□□□ 0.19
NUCB2-216ENST00000533738 R3HDM1Q15032 1099 aaKnown RBP16.24■□□□□ 0.19
NUCB2-216ENST00000533738 CC2D1BQ5T0F9 858 aaKnown RBP16.23■□□□□ 0.19
NUCB2-216ENST00000533738 PROM2Q8N271 834 aa16.23■□□□□ 0.19
NUCB2-216ENST00000533738 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
NUCB2-216ENST00000533738 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
NUCB2-216ENST00000533738 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
NUCB2-216ENST00000533738 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
NUCB2-216ENST00000533738 BTAF1O14981 1849 aa16.22■□□□□ 0.19
NUCB2-216ENST00000533738 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
NUCB2-216ENST00000533738 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
NUCB2-216ENST00000533738 CYP27B1O15528 508 aa16.2■□□□□ 0.18
NUCB2-216ENST00000533738 TXNRD1Q16881 649 aa16.2■□□□□ 0.18
NUCB2-216ENST00000533738 PRIM1P49642 420 aaKnown RBP16.19■□□□□ 0.18
NUCB2-216ENST00000533738 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
NUCB2-216ENST00000533738 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
NUCB2-216ENST00000533738 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
NUCB2-216ENST00000533738 CNGB1Q14028 1251 aaPredicted RBP16.18■□□□□ 0.18
NUCB2-216ENST00000533738 IL13P35225 146 aa16.17■□□□□ 0.18
NUCB2-216ENST00000533738 MTHFSP49914 203 aa16.17■□□□□ 0.18
NUCB2-216ENST00000533738 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
NUCB2-216ENST00000533738 LRP5O75197 1615 aa16.16■□□□□ 0.18
NUCB2-216ENST00000533738 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
NUCB2-216ENST00000533738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.184e-6■■■□□ 17.4
NUCB2-216ENST00000533738 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
NUCB2-216ENST00000533738 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
NUCB2-216ENST00000533738 AEBP1Q8IUX7 1158 aa16.15■□□□□ 0.18
NUCB2-216ENST00000533738 LRRC4BQ9NT99 713 aa16.14■□□□□ 0.17
NUCB2-216ENST00000533738 PHKG2P15735 406 aa16.13■□□□□ 0.17
NUCB2-216ENST00000533738 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
NUCB2-216ENST00000533738 COL3A1P02461 1466 aaPredicted RBP16.13■□□□□ 0.17
NUCB2-216ENST00000533738 KDRP35968 1356 aa16.13■□□□□ 0.17
NUCB2-216ENST00000533738 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
NUCB2-216ENST00000533738 STK32BQ9NY57 414 aa16.12■□□□□ 0.17
NUCB2-216ENST00000533738 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
NUCB2-216ENST00000533738 IFNL2Q8IZJ0 200 aa16.11■□□□□ 0.17
NUCB2-216ENST00000533738 KCNQ4P56696 695 aa16.1■□□□□ 0.17
NUCB2-216ENST00000533738 SLC27A3Q5K4L6 730 aa16.1■□□□□ 0.17
NUCB2-216ENST00000533738 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
NUCB2-216ENST00000533738 KAT6BQ8WYB5 2073 aa16.1■□□□□ 0.17
NUCB2-216ENST00000533738 LY75O60449 1722 aa16.1■□□□□ 0.17
NUCB2-216ENST00000533738 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
NUCB2-216ENST00000533738 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
NUCB2-216ENST00000533738 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
NUCB2-216ENST00000533738 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
NUCB2-216ENST00000533738 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
NUCB2-216ENST00000533738 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
NUCB2-216ENST00000533738 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
NUCB2-216ENST00000533738 PIGBQ92521 554 aa16.08■□□□□ 0.16
NUCB2-216ENST00000533738 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
NUCB2-216ENST00000533738 ITGB4P16144 1822 aa16.08■□□□□ 0.16
NUCB2-216ENST00000533738 HMOX1P09601 288 aa16.07■□□□□ 0.16
NUCB2-216ENST00000533738 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
NUCB2-216ENST00000533738 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
NUCB2-216ENST00000533738 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
NUCB2-216ENST00000533738 PPP2R1AP30153 589 aa16.06■□□□□ 0.16
NUCB2-216ENST00000533738 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
NUCB2-216ENST00000533738 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
NUCB2-216ENST00000533738 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
NUCB2-216ENST00000533738 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
NUCB2-216ENST00000533738 ZBTB7AO95365 584 aa16.03■□□□□ 0.16
NUCB2-216ENST00000533738 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
NUCB2-216ENST00000533738 SMARCC1Q92922 1105 aaPredicted RBP16.03■□□□□ 0.16
NUCB2-216ENST00000533738 SPON1Q9HCB6 807 aa16.03■□□□□ 0.16
NUCB2-216ENST00000533738 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
NUCB2-216ENST00000533738 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
NUCB2-216ENST00000533738 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.16
NUCB2-216ENST00000533738 C5P01031 1676 aa16.02■□□□□ 0.15
NUCB2-216ENST00000533738 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
NUCB2-216ENST00000533738 TUBGCP6Q96RT7 1819 aa16.01■□□□□ 0.15
NUCB2-216ENST00000533738 QSER1Q2KHR3 1735 aa16■□□□□ 0.15
NUCB2-216ENST00000533738 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
NUCB2-216ENST00000533738 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
NUCB2-216ENST00000533738 ATG3Q9NT62 314 aa16■□□□□ 0.15
NUCB2-216ENST00000533738 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
NUCB2-216ENST00000533738 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
NUCB2-216ENST00000533738 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
NUCB2-216ENST00000533738 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
NUCB2-216ENST00000533738 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
NUCB2-216ENST00000533738 PTGER2P43116 358 aa15.98■□□□□ 0.15
NUCB2-216ENST00000533738 SIK1P57059 783 aa15.98■□□□□ 0.15
NUCB2-216ENST00000533738 CABP4P57796 275 aa15.98■□□□□ 0.15
NUCB2-216ENST00000533738 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
NUCB2-216ENST00000533738 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
NUCB2-216ENST00000533738 C4BP0C0L5 1744 aa15.97■□□□□ 0.15
NUCB2-216ENST00000533738 MRC1P22897 1456 aa15.97■□□□□ 0.15
NUCB2-216ENST00000533738 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms