RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.11
PACSIN3-210ENST00000533686 DIEXFQ68CQ4 756 aaKnown RBP22■■□□□ 1.11
PACSIN3-210ENST00000533686 LRRC37A3O60309 1634 aa21.99■■□□□ 1.11
PACSIN3-210ENST00000533686 HMOX1P09601 288 aa21.99■■□□□ 1.11
PACSIN3-210ENST00000533686 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
PACSIN3-210ENST00000533686 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
PACSIN3-210ENST00000533686 BRWD3Q6RI45 1802 aa21.97■■□□□ 1.11
PACSIN3-210ENST00000533686 FCHSD2O94868 740 aa21.97■■□□□ 1.11
PACSIN3-210ENST00000533686 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
PACSIN3-210ENST00000533686 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
PACSIN3-210ENST00000533686 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
PACSIN3-210ENST00000533686 PLEKHO1Q53GL0 409 aaPredicted RBP21.96■■□□□ 1.11
PACSIN3-210ENST00000533686 FAM196AQ6ZSG2 479 aa21.95■■□□□ 1.1
PACSIN3-210ENST00000533686 RSPH6AQ9H0K4 717 aa21.95■■□□□ 1.1
PACSIN3-210ENST00000533686 DDX54Q8TDD1 881 aaKnown RBP21.94■■□□□ 1.1
PACSIN3-210ENST00000533686 PCDH11XQ9BZA7 1347 aa21.94■■□□□ 1.1
PACSIN3-210ENST00000533686 PCDH11YQ9BZA8 1340 aa21.94■■□□□ 1.1
PACSIN3-210ENST00000533686 BCL9O00512 1426 aa21.94■■□□□ 1.1
PACSIN3-210ENST00000533686 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
PACSIN3-210ENST00000533686 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
PACSIN3-210ENST00000533686 CYP27B1O15528 508 aa21.91■■□□□ 1.1
PACSIN3-210ENST00000533686 PRKAR2BP31323 418 aa21.91■■□□□ 1.1
PACSIN3-210ENST00000533686 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
PACSIN3-210ENST00000533686 FAM182BQ5T319 152 aa21.91■■□□□ 1.1
PACSIN3-210ENST00000533686 PNNQ9H307 717 aaKnown RBP21.91■■□□□ 1.1
PACSIN3-210ENST00000533686 IFNL2Q8IZJ0 200 aa21.9■■□□□ 1.1
PACSIN3-210ENST00000533686 MRS2Q9HD23 443 aa21.9■■□□□ 1.1
PACSIN3-210ENST00000533686 PHKG2P15735 406 aa21.88■■□□□ 1.09
PACSIN3-210ENST00000533686 NKX1-1Q15270 411 aaPredicted RBP21.88■■□□□ 1.09
PACSIN3-210ENST00000533686 SHANK3Q9BYB0 1731 aa21.87■■□□□ 1.09
PACSIN3-210ENST00000533686 ZNF530Q6P9A1 599 aaPredicted RBP21.87■■□□□ 1.09
PACSIN3-210ENST00000533686 PLEKHF1Q96S99 279 aa21.87■■□□□ 1.09
PACSIN3-210ENST00000533686 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
PACSIN3-210ENST00000533686 CCER2I3L3R5 266 aa21.86■■□□□ 1.09
PACSIN3-210ENST00000533686 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
PACSIN3-210ENST00000533686 GAS2L2Q8NHY3 880 aa21.86■■□□□ 1.09
PACSIN3-210ENST00000533686 PNISRQ8TF01 805 aaKnown RBP21.86■■□□□ 1.09
PACSIN3-210ENST00000533686 PHACTR3Q96KR7 559 aa21.86■■□□□ 1.09
PACSIN3-210ENST00000533686 NEFMP07197 916 aa21.85■■□□□ 1.09
PACSIN3-210ENST00000533686 HSP90AB1P08238 724 aaKnown RBP21.85■■□□□ 1.09
PACSIN3-210ENST00000533686 C1orf141Q5JVX7 400 aa21.85■■□□□ 1.09
PACSIN3-210ENST00000533686 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
PACSIN3-210ENST00000533686 CCDC125Q86Z20 511 aa21.84■■□□□ 1.09
PACSIN3-210ENST00000533686 UPF1Q92900 1129 aaKnown RBP eCLIP21.83■■□□□ 1.093e-66■■■■■ 117.9
PACSIN3-210ENST00000533686 RUNDC1Q96C34 613 aa21.81■■□□□ 1.08
PACSIN3-210ENST00000533686 DCAF5Q96JK2 942 aa21.81■■□□□ 1.08
PACSIN3-210ENST00000533686 BCL11BQ9C0K0 894 aaPredicted RBP21.81■■□□□ 1.08
PACSIN3-210ENST00000533686 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
PACSIN3-210ENST00000533686 SOCS7O14512 581 aa21.8■■□□□ 1.08
PACSIN3-210ENST00000533686 TRIM37O94972 964 aa21.8■■□□□ 1.08
PACSIN3-210ENST00000533686 MIER1Q8N108 512 aa21.8■■□□□ 1.08
PACSIN3-210ENST00000533686 ACSBG1Q96GR2 724 aa21.79■■□□□ 1.08
PACSIN3-210ENST00000533686 EP400Q96L91 3159 aa21.79■■□□□ 1.08
PACSIN3-210ENST00000533686 GNAT3A8MTJ3 354 aa21.78■■□□□ 1.08
PACSIN3-210ENST00000533686 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
PACSIN3-210ENST00000533686 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
PACSIN3-210ENST00000533686 KCNQ2O43526 872 aa21.77■■□□□ 1.08
PACSIN3-210ENST00000533686 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.08
PACSIN3-210ENST00000533686 NFE2L2Q16236 605 aa21.77■■□□□ 1.08
PACSIN3-210ENST00000533686 KDM6AO15550 1401 aaPredicted RBP21.76■■□□□ 1.07
PACSIN3-210ENST00000533686 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
PACSIN3-210ENST00000533686 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
PACSIN3-210ENST00000533686 MPRIPQ6WCQ1 1025 aa21.76■■□□□ 1.07
PACSIN3-210ENST00000533686 RNMTO43148 476 aaKnown RBP21.75■■□□□ 1.07
PACSIN3-210ENST00000533686 CCDC146Q8IYE0 955 aa21.75■■□□□ 1.07
PACSIN3-210ENST00000533686 SBF2Q86WG5 1849 aa21.75■■□□□ 1.07
PACSIN3-210ENST00000533686 PTF1AQ7RTS3 328 aa21.74■■□□□ 1.07
PACSIN3-210ENST00000533686 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
PACSIN3-210ENST00000533686 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
PACSIN3-210ENST00000533686 TMPOP42166 694 aaKnown RBP21.73■■□□□ 1.07
PACSIN3-210ENST00000533686 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
PACSIN3-210ENST00000533686 APBA3O96018 575 aa21.72■■□□□ 1.07
PACSIN3-210ENST00000533686 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
PACSIN3-210ENST00000533686 RTF1Q92541 710 aaKnown RBP21.72■■□□□ 1.07
PACSIN3-210ENST00000533686 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
PACSIN3-210ENST00000533686 BAG6P46379 1132 aa21.71■■□□□ 1.07
PACSIN3-210ENST00000533686 FAM9BQ8IZU0 186 aa21.71■■□□□ 1.07
PACSIN3-210ENST00000533686 TMOD3Q9NYL9 352 aa21.71■■□□□ 1.07
PACSIN3-210ENST00000533686 ADAMTS7Q9UKP4 1686 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 PLSCR1O15162 318 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 RIPK4P57078 832 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 CABP4P57796 275 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 PIGBQ92521 554 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
PACSIN3-210ENST00000533686 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
PACSIN3-210ENST00000533686 TNS1Q9HBL0 1735 aaKnown RBP21.69■■□□□ 1.06
PACSIN3-210ENST00000533686 APAF1O14727 1248 aa21.68■■□□□ 1.06
PACSIN3-210ENST00000533686 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
PACSIN3-210ENST00000533686 KAT6BQ8WYB5 2073 aa21.67■■□□□ 1.06
PACSIN3-210ENST00000533686 MRC1P22897 1456 aa21.67■■□□□ 1.06
PACSIN3-210ENST00000533686 NFATC2IPQ8NCF5 419 aa21.67■■□□□ 1.06
PACSIN3-210ENST00000533686 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 TEFQ10587 303 aa21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 MCM10Q7L590 875 aa21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 DEFB132Q7Z7B7 95 aa21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 CAMKK2Q96RR4 588 aa21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
PACSIN3-210ENST00000533686 SMARCC1Q92922 1105 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms