RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
SOX6-216ENST00000533658 HOXA2O43364 376 aa9.71□□□□□ -0.86
SOX6-216ENST00000533658 FMN1Q68DA7 1419 aa9.71□□□□□ -0.86
SOX6-216ENST00000533658 LRRIQ1Q96JM4 1722 aa9.7□□□□□ -0.86
SOX6-216ENST00000533658 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
SOX6-216ENST00000533658 AFAP1Q8N556 730 aa9.7□□□□□ -0.86
SOX6-216ENST00000533658 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
SOX6-216ENST00000533658 MPNDQ8N594 471 aa9.69□□□□□ -0.86
SOX6-216ENST00000533658 CNTNAP3BQ96NU0 1288 aa9.69□□□□□ -0.86
SOX6-216ENST00000533658 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
SOX6-216ENST00000533658 CNTNAP3Q9BZ76 1288 aa9.69□□□□□ -0.86
SOX6-216ENST00000533658 DIP2CQ9Y2E4 1556 aa9.69□□□□□ -0.86
SOX6-216ENST00000533658 MYO5CQ9NQX4 1742 aa9.68□□□□□ -0.86
SOX6-216ENST00000533658 PTPRTO14522 1441 aa9.68□□□□□ -0.86
SOX6-216ENST00000533658 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
SOX6-216ENST00000533658 EFCAB2Q5VUJ9 269 aa9.68□□□□□ -0.86
SOX6-216ENST00000533658 SYMPKQ92797 1274 aaKnown RBP9.68□□□□□ -0.86
SOX6-216ENST00000533658 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
SOX6-216ENST00000533658 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
SOX6-216ENST00000533658 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
SOX6-216ENST00000533658 ARHGAP5Q13017 1502 aa9.67□□□□□ -0.86
SOX6-216ENST00000533658 TROQ12816 1431 aaPredicted RBP9.67□□□□□ -0.86
SOX6-216ENST00000533658 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
SOX6-216ENST00000533658 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
SOX6-216ENST00000533658 RETREG3Q86VR2 466 aa9.67□□□□□ -0.86
SOX6-216ENST00000533658 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
SOX6-216ENST00000533658 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
SOX6-216ENST00000533658 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
SOX6-216ENST00000533658 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
SOX6-216ENST00000533658 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
SOX6-216ENST00000533658 NCOA1Q15788 1441 aa9.65□□□□□ -0.86
SOX6-216ENST00000533658 SVOPQ8N4V2 548 aa9.65□□□□□ -0.86
SOX6-216ENST00000533658 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.86
SOX6-216ENST00000533658 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
SOX6-216ENST00000533658 MLH3Q9UHC1 1453 aa9.65□□□□□ -0.87
SOX6-216ENST00000533658 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.87
SOX6-216ENST00000533658 C3P01024 1663 aa9.64□□□□□ -0.87
SOX6-216ENST00000533658 BAP1Q92560 729 aa9.64□□□□□ -0.87
SOX6-216ENST00000533658 AGLP35573 1532 aa9.64□□□□□ -0.87
SOX6-216ENST00000533658 IQSEC2Q5JU85 1478 aa9.64□□□□□ -0.87
SOX6-216ENST00000533658 CASKIN1Q8WXD9 1431 aa9.64□□□□□ -0.87
SOX6-216ENST00000533658 ABCC1P33527 1531 aa9.63□□□□□ -0.87
SOX6-216ENST00000533658 MS4A1P11836 297 aa9.63□□□□□ -0.87
SOX6-216ENST00000533658 LCE3BQ5TA77 95 aa9.63□□□□□ -0.87
SOX6-216ENST00000533658 ZNF511Q8NB15 262 aa9.63□□□□□ -0.87
SOX6-216ENST00000533658 CLIP1P30622 1438 aa9.63□□□□□ -0.87
SOX6-216ENST00000533658 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
SOX6-216ENST00000533658 HNRNPMP52272 730 aaKnown RBP eCLIP9.61□□□□□ -0.87
SOX6-216ENST00000533658 Q8N3U1 123 aa9.61□□□□□ -0.87
SOX6-216ENST00000533658 COL25A1Q9BXS0 654 aaPredicted RBP9.61□□□□□ -0.87
SOX6-216ENST00000533658 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
SOX6-216ENST00000533658 CNTLNQ9NXG0 1405 aa9.61□□□□□ -0.87
SOX6-216ENST00000533658 CDC42BPBQ9Y5S2 1711 aa9.61□□□□□ -0.87
SOX6-216ENST00000533658 SETD1BQ9UPS6 1966 aaKnown RBP9.61□□□□□ -0.87
SOX6-216ENST00000533658 PREX2Q70Z35 1606 aa9.6□□□□□ -0.87
SOX6-216ENST00000533658 NPATQ14207 1427 aa9.6□□□□□ -0.87
SOX6-216ENST00000533658 PTPRNQ16849 979 aa9.6□□□□□ -0.87
SOX6-216ENST00000533658 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
SOX6-216ENST00000533658 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
SOX6-216ENST00000533658 CAMSAP1Q5T5Y3 1602 aa9.6□□□□□ -0.87
SOX6-216ENST00000533658 MSTNO14793 375 aa9.59□□□□□ -0.87
SOX6-216ENST00000533658 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
SOX6-216ENST00000533658 BMP2P12643 396 aa9.59□□□□□ -0.87
SOX6-216ENST00000533658 EVA1BQ9NVM1 165 aa9.59□□□□□ -0.87
SOX6-216ENST00000533658 SOS2Q07890 1332 aaPredicted RBP9.58□□□□□ -0.88
SOX6-216ENST00000533658 ZNF335Q9H4Z2 1342 aaPredicted RBP9.58□□□□□ -0.88
SOX6-216ENST00000533658 ZNF644Q9H582 1327 aaPredicted RBP9.58□□□□□ -0.88
SOX6-216ENST00000533658 ITSN2Q9NZM3 1697 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 MARSP56192 900 aaKnown RBP9.58□□□□□ -0.88
SOX6-216ENST00000533658 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 WHAMMQ8TF30 809 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
SOX6-216ENST00000533658 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
SOX6-216ENST00000533658 UPP2O95045 317 aa9.57□□□□□ -0.88
SOX6-216ENST00000533658 FAM174AQ8TBP5 190 aa9.57□□□□□ -0.88
SOX6-216ENST00000533658 SAMD9LQ8IVG5 1584 aa9.57□□□□□ -0.88
SOX6-216ENST00000533658 SYCP2Q9BX26 1530 aa9.56□□□□□ -0.88
SOX6-216ENST00000533658 GPATCH8Q9UKJ3 1502 aaKnown RBP9.56□□□□□ -0.88
SOX6-216ENST00000533658 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
SOX6-216ENST00000533658 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
SOX6-216ENST00000533658 RNFT1Q5M7Z0 435 aa9.56□□□□□ -0.88
SOX6-216ENST00000533658 MEIOBQ8N635 442 aa9.56□□□□□ -0.88
SOX6-216ENST00000533658 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
SOX6-216ENST00000533658 PLA2R1Q13018 1463 aa9.55□□□□□ -0.88
SOX6-216ENST00000533658 TCOF1Q13428 1488 aaKnown RBP9.55□□□□□ -0.88
SOX6-216ENST00000533658 SLURP2P0DP57 97 aa9.55□□□□□ -0.88
SOX6-216ENST00000533658 SCARF2Q96GP6 870 aaPredicted RBP9.55□□□□□ -0.88
SOX6-216ENST00000533658 CDK15Q96Q40 435 aa9.55□□□□□ -0.88
SOX6-216ENST00000533658 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
SOX6-216ENST00000533658 ZNF142P52746 1687 aaPredicted RBP9.55□□□□□ -0.88
SOX6-216ENST00000533658 PLXNC1O60486 1568 aa9.54□□□□□ -0.88
SOX6-216ENST00000533658 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
SOX6-216ENST00000533658 MTUS2Q5JR59 1369 aa9.54□□□□□ -0.88
SOX6-216ENST00000533658 UBAP1LF5GYI3 381 aa9.54□□□□□ -0.88
SOX6-216ENST00000533658 NR3C2P08235 984 aa9.54□□□□□ -0.88
SOX6-216ENST00000533658 NANOS1Q8WY41 292 aaKnown RBP9.54□□□□□ -0.88
SOX6-216ENST00000533658 SPOCK3Q9BQ16 436 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms