RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 RAPGEF4Q8WZA2 1011 aa30.59■■■□□ 2.49
BEST1-207ENST00000533521 KCNQ2O43526 872 aa30.57■■■□□ 2.48
BEST1-207ENST00000533521 KAT6BQ8WYB5 2073 aa30.56■■■□□ 2.48
BEST1-207ENST00000533521 PROM2Q8N271 834 aa30.56■■■□□ 2.48
BEST1-207ENST00000533521 DDX54Q8TDD1 881 aaKnown RBP30.56■■■□□ 2.48
BEST1-207ENST00000533521 BTAF1O14981 1849 aa30.55■■■□□ 2.48
BEST1-207ENST00000533521 TATP17735 454 aaPredicted RBP30.55■■■□□ 2.48
BEST1-207ENST00000533521 KNSTRNQ9Y448 316 aa30.55■■■□□ 2.48
BEST1-207ENST00000533521 PLEKHG2Q9H7P9 1386 aa30.53■■■□□ 2.48
BEST1-207ENST00000533521 PPM1GO15355 546 aaPredicted RBP30.52■■■□□ 2.48
BEST1-207ENST00000533521 TXNRD1Q16881 649 aa30.52■■■□□ 2.48
BEST1-207ENST00000533521 ACSBG1Q96GR2 724 aa30.52■■■□□ 2.48
BEST1-207ENST00000533521 USHBP1Q8N6Y0 703 aa30.51■■■□□ 2.47
BEST1-207ENST00000533521 PKD1L3Q7Z443 1732 aa30.48■■■□□ 2.47
BEST1-207ENST00000533521 AMER1Q5JTC6 1135 aaPredicted RBP30.48■■■□□ 2.47
BEST1-207ENST00000533521 MORC1Q86VD1 984 aa30.48■■■□□ 2.47
BEST1-207ENST00000533521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.48■■■□□ 2.47
BEST1-207ENST00000533521 PCDH11XQ9BZA7 1347 aa30.47■■■□□ 2.47
BEST1-207ENST00000533521 PCDH11YQ9BZA8 1340 aa30.47■■■□□ 2.47
BEST1-207ENST00000533521 EYA1Q99502 592 aa30.47■■■□□ 2.47
BEST1-207ENST00000533521 DOT1LQ8TEK3 1739 aa30.47■■■□□ 2.47
BEST1-207ENST00000533521 PER1O15534 1290 aaPredicted RBP30.45■■■□□ 2.47
BEST1-207ENST00000533521 TNNT2P45379 298 aaPredicted RBP30.45■■■□□ 2.47
BEST1-207ENST00000533521 PRIM1P49642 420 aaKnown RBP30.43■■■□□ 2.46
BEST1-207ENST00000533521 EIF4A2Q14240 407 aaKnown RBP30.43■■■□□ 2.46
BEST1-207ENST00000533521 ANO8Q9HCE9 1232 aaPredicted RBP30.43■■■□□ 2.46
BEST1-207ENST00000533521 SLC27A3Q5K4L6 730 aa30.42■■■□□ 2.46
BEST1-207ENST00000533521 SPG7Q9UQ90 795 aa30.41■■■□□ 2.46
BEST1-207ENST00000533521 NPC1L1Q9UHC9 1359 aa30.41■■■□□ 2.46
BEST1-207ENST00000533521 PAPPAQ13219 1627 aa30.4■■■□□ 2.46
BEST1-207ENST00000533521 STK32BQ9NY57 414 aa30.4■■■□□ 2.46
BEST1-207ENST00000533521 IGSF1Q8N6C5 1336 aa30.4■■■□□ 2.46
BEST1-207ENST00000533521 CASZ1Q86V15 1759 aa30.39■■■□□ 2.46
BEST1-207ENST00000533521 CYP27B1O15528 508 aa30.39■■■□□ 2.46
BEST1-207ENST00000533521 NKX1-1Q15270 411 aaPredicted RBP30.39■■■□□ 2.46
BEST1-207ENST00000533521 SLC15A2Q16348 729 aa30.39■■■□□ 2.46
BEST1-207ENST00000533521 LY75O60449 1722 aa30.39■■■□□ 2.45
BEST1-207ENST00000533521 SYTL4Q96C24 671 aaPredicted RBP30.36■■■□□ 2.45
BEST1-207ENST00000533521 HMGB2P26583 209 aaKnown RBP30.35■■■□□ 2.45
BEST1-207ENST00000533521 SPON1Q9HCB6 807 aa30.35■■■□□ 2.45
BEST1-207ENST00000533521 LRRC4BQ9NT99 713 aa30.33■■■□□ 2.45
BEST1-207ENST00000533521 ITGB4P16144 1822 aa30.31■■■□□ 2.44
BEST1-207ENST00000533521 QSER1Q2KHR3 1735 aa30.3■■■□□ 2.44
BEST1-207ENST00000533521 IFNL2Q8IZJ0 200 aa30.29■■■□□ 2.44
BEST1-207ENST00000533521 TOGARAM1Q9Y4F4 1720 aa30.28■■■□□ 2.44
BEST1-207ENST00000533521 AKT1S1Q96B36 256 aa30.27■■■□□ 2.44
BEST1-207ENST00000533521 KDRP35968 1356 aa30.27■■■□□ 2.44
BEST1-207ENST00000533521 PHKG2P15735 406 aa30.26■■■□□ 2.43
BEST1-207ENST00000533521 IL13P35225 146 aa30.26■■■□□ 2.43
BEST1-207ENST00000533521 AMOTQ4VCS5 1084 aa30.25■■■□□ 2.43
BEST1-207ENST00000533521 MTHFSP49914 203 aa30.24■■■□□ 2.43
BEST1-207ENST00000533521 SMARCC1Q92922 1105 aaPredicted RBP30.24■■■□□ 2.43
BEST1-207ENST00000533521 PLEKHO1Q53GL0 409 aaPredicted RBP30.23■■■□□ 2.43
BEST1-207ENST00000533521 HSP90AB1P08238 724 aaKnown RBP30.22■■■□□ 2.43
BEST1-207ENST00000533521 CCNL1Q9UK58 526 aaPredicted RBP30.22■■■□□ 2.43
BEST1-207ENST00000533521 ZNF827Q17R98 1081 aa30.21■■■□□ 2.43
BEST1-207ENST00000533521 CC2D1BQ5T0F9 858 aaKnown RBP30.21■■■□□ 2.43
BEST1-207ENST00000533521 MPRIPQ6WCQ1 1025 aa30.21■■■□□ 2.43
BEST1-207ENST00000533521 PDGFDQ9GZP0 370 aaPredicted RBP30.21■■■□□ 2.43
BEST1-207ENST00000533521 MTFR1LQ9H019 292 aa30.21■■■□□ 2.43
BEST1-207ENST00000533521 SLC16A10Q8TF71 515 aa30.2■■■□□ 2.43
BEST1-207ENST00000533521 PIGBQ92521 554 aa30.19■■■□□ 2.42
BEST1-207ENST00000533521 PALLDQ8WX93 1383 aa30.18■■■□□ 2.42
BEST1-207ENST00000533521 SULT6B1Q6IMI4 303 aa30.17■■■□□ 2.42
BEST1-207ENST00000533521 ERVV-2B6SEH9 535 aa30.16■■■□□ 2.42
BEST1-207ENST00000533521 PTGER2P43116 358 aa30.16■■■□□ 2.42
BEST1-207ENST00000533521 DCAF5Q96JK2 942 aa30.16■■■□□ 2.42
BEST1-207ENST00000533521 TMOD3Q9NYL9 352 aa30.16■■■□□ 2.42
BEST1-207ENST00000533521 TAF1LQ8IZX4 1826 aa30.16■■■□□ 2.42
BEST1-207ENST00000533521 ZBTB7AO95365 584 aa30.15■■■□□ 2.42
BEST1-207ENST00000533521 AEBP1Q8IUX7 1158 aa30.15■■■□□ 2.42
BEST1-207ENST00000533521 PPP1R1BQ9UD71 204 aaPredicted RBP30.15■■■□□ 2.42
BEST1-207ENST00000533521 C5P01031 1676 aa30.14■■■□□ 2.42
BEST1-207ENST00000533521 TUBGCP6Q96RT7 1819 aa30.14■■■□□ 2.42
BEST1-207ENST00000533521 COL24A1Q17RW2 1714 aa30.13■■■□□ 2.41
BEST1-207ENST00000533521 DIAPH1O60610 1272 aaKnown RBP30.13■■■□□ 2.41
BEST1-207ENST00000533521 SGIP1Q9BQI5 828 aa30.13■■■□□ 2.41
BEST1-207ENST00000533521 KCNQ4P56696 695 aa30.12■■■□□ 2.41
BEST1-207ENST00000533521 ZNF530Q6P9A1 599 aaPredicted RBP30.12■■■□□ 2.41
BEST1-207ENST00000533521 TFCP2L1Q9NZI6 479 aa30.12■■■□□ 2.41
BEST1-207ENST00000533521 PNPLA7Q6ZV29 1317 aa30.11■■■□□ 2.41
BEST1-207ENST00000533521 COL3A1P02461 1466 aaPredicted RBP30.09■■■□□ 2.41
BEST1-207ENST00000533521 ZNF831Q5JPB2 1677 aa30.09■■■□□ 2.41
BEST1-207ENST00000533521 C1orf141Q5JVX7 400 aa30.09■■■□□ 2.41
BEST1-207ENST00000533521 ATF5Q9Y2D1 282 aaPredicted RBP30.09■■■□□ 2.41
BEST1-207ENST00000533521 FLAD1Q8NFF5 587 aa30.07■■■□□ 2.4
BEST1-207ENST00000533521 KDM6AO15550 1401 aaPredicted RBP30.06■■■□□ 2.4
BEST1-207ENST00000533521 LOC102724428A0A0B4J2F2 783 aa30.06■■■□□ 2.4
BEST1-207ENST00000533521 SIK1P57059 783 aa30.06■■■□□ 2.4
BEST1-207ENST00000533521 C4BP0C0L5 1744 aa30.05■■■□□ 2.4
BEST1-207ENST00000533521 ATG3Q9NT62 314 aa30.05■■■□□ 2.4
BEST1-207ENST00000533521 ASAP1Q9ULH1 1129 aa30.05■■■□□ 2.4
BEST1-207ENST00000533521 SCN11AQ9UI33 1791 aa30.03■■■□□ 2.4
BEST1-207ENST00000533521 AKAP4Q5JQC9 854 aa30.03■■■□□ 2.4
BEST1-207ENST00000533521 MAP3K5Q99683 1374 aa30.02■■■□□ 2.4
BEST1-207ENST00000533521 CABP4P57796 275 aa30■■■□□ 2.39
BEST1-207ENST00000533521 CFAP53Q96M91 514 aa30■■■□□ 2.39
BEST1-207ENST00000533521 ARXQ96QS3 562 aa30■■■□□ 2.39
BEST1-207ENST00000533521 HMOX1P09601 288 aa29.99■■■□□ 2.39
BEST1-207ENST00000533521 COL23A1Q86Y22 540 aaPredicted RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms