RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 EHMT2Q96KQ7 1210 aa2.93□□□□□ -1.94
KNL1-211ENST00000533001 SYT17Q9BSW7 474 aa2.93□□□□□ -1.94
KNL1-211ENST00000533001 JMYQ8N9B5 988 aa2.93□□□□□ -1.94
KNL1-211ENST00000533001 R3HDM1Q15032 1099 aaKnown RBP2.93□□□□□ -1.94
KNL1-211ENST00000533001 TAF1P21675 1872 aa2.93□□□□□ -1.94
KNL1-211ENST00000533001 CRB1P82279 1406 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 EID1Q9Y6B2 187 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 C10orf71Q711Q0 1435 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 PNPLA7Q6ZV29 1317 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 KRT27Q7Z3Y8 459 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 NLGN2Q8NFZ4 835 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 SCN9AQ15858 1988 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 BCORQ6W2J9 1755 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 OVOS2A0A0G2JMS6 1433 aa2.92□□□□□ -1.94
KNL1-211ENST00000533001 MRC1P22897 1456 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 POLR2AP24928 1970 aaKnown RBP2.91□□□□□ -1.94
KNL1-211ENST00000533001 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.91□□□□□ -1.94
KNL1-211ENST00000533001 SLX4Q8IY92 1834 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 ARHGEF10O15013 1369 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 ANKRD11Q6UB99 2663 aaPredicted RBP2.91□□□□□ -1.94
KNL1-211ENST00000533001 MUC6Q6W4X9 2439 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 NBPF8Q3BBV2 869 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 BRWD1Q9NSI6 2320 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 PHF8Q9UPP1 1060 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 CSMD1Q96PZ7 3565 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 KCPQ6ZWJ8 1503 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 C1QTNF8P60827 252 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 ZRANB1Q9UGI0 708 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 RBBP6Q7Z6E9 1792 aaKnown RBP2.91□□□□□ -1.94
KNL1-211ENST00000533001 SMG6Q86US8 1419 aaKnown RBP2.91□□□□□ -1.94
KNL1-211ENST00000533001 FAM98CQ17RN3 349 aaKnown RBP2.91□□□□□ -1.94
KNL1-211ENST00000533001 RGL3Q3MIN7 710 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 BTG4Q9NY30 223 aa2.91□□□□□ -1.94
KNL1-211ENST00000533001 TIAM2Q8IVF5 1701 aa2.9□□□□□ -1.94
KNL1-211ENST00000533001 KRT28Q7Z3Y7 464 aa2.9□□□□□ -1.94
KNL1-211ENST00000533001 TNRC6CQ9HCJ0 1690 aaKnown RBP2.9□□□□□ -1.94
KNL1-211ENST00000533001 SSC5DA1L4H1 1573 aa2.9□□□□□ -1.94
KNL1-211ENST00000533001 WASLO00401 505 aaPredicted RBP2.9□□□□□ -1.95
KNL1-211ENST00000533001 NGLY1Q96IV0 654 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 CSMD2Q7Z408 3487 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 CHD8Q9HCK8 2581 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 DUOX1Q9NRD9 1551 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 RNF216Q9NWF9 866 aaPredicted RBP2.9□□□□□ -1.95
KNL1-211ENST00000533001 PSME4Q14997 1843 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 SLC34A2O95436 690 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 SLC51AQ86UW1 340 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.9□□□□□ -1.95
KNL1-211ENST00000533001 SCN7AQ01118 1682 aa2.9□□□□□ -1.95
KNL1-211ENST00000533001 WDR17Q8IZU2 1322 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 NUTM2BA6NNL0 878 aaPredicted RBP2.89□□□□□ -1.95
KNL1-211ENST00000533001 NUTM2EB1AL46 878 aaPredicted RBP2.89□□□□□ -1.95
KNL1-211ENST00000533001 NUTM2AQ8IVF1 878 aaPredicted RBP2.89□□□□□ -1.95
KNL1-211ENST00000533001 PRAM1Q96QH2 718 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 ZFYVE26Q68DK2 2539 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 GCP02774 474 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 MPHOSPH9Q99550 1183 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 LAMB2P55268 1798 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 RAB3GAP2Q9H2M9 1393 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 AKAP13Q12802 2813 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 LRRC37AA6NMS7 1700 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 NCBP3Q53F19 620 aaKnown RBP2.89□□□□□ -1.95
KNL1-211ENST00000533001 ACEP12821 1306 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 CACNA1HO95180 2353 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 TRIM37O94972 964 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 CHRNA2Q15822 529 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 KANK1Q14678 1352 aa2.89□□□□□ -1.95
KNL1-211ENST00000533001 PPIP5K1Q6PFW1 1433 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 SMIM5Q71RC9 77 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 FHDC1Q9C0D6 1143 aaPredicted RBP2.88□□□□□ -1.95
KNL1-211ENST00000533001 ASH1LQ9NR48 2969 aaKnown RBP2.88□□□□□ -1.95
KNL1-211ENST00000533001 A0A1B0GUL6 1792 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 TENM4Q6N022 2769 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 ALPK3Q96L96 1907 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 KIF20BQ96Q89 1820 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 CEP295Q9C0D2 2601 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 TONSLQ96HA7 1378 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 BSNQ9UPA5 3926 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 ATF3P18847 181 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 MAST4O15021 2626 aa2.88□□□□□ -1.95
KNL1-211ENST00000533001 VGFO15240 615 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 FBLN1P23142 703 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 COL13A1Q5TAT6 717 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 CNKSR2Q8WXI2 1034 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 ATP1B4Q9UN42 357 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 CASP8AP2Q9UKL3 1982 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 USP24Q9UPU5 2620 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 ESF1Q9H501 851 aaKnown RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 DLG5Q8TDM6 1919 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 CARD14Q9BXL6 1004 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 UNC79Q9P2D8 2635 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 PPP1R15AO75807 674 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 CACNB1Q02641 598 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 NKX1-1Q15270 411 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 SLC15A2Q16348 729 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 TXNRD1Q16881 649 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 PMFBP1Q8TBY8 1022 aa2.87□□□□□ -1.95
KNL1-211ENST00000533001 BRD4O60885 1362 aaPredicted RBP2.87□□□□□ -1.95
KNL1-211ENST00000533001 CRYBG3Q68DQ2 2970 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 CYP27B1O15528 508 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 KCNQ4P56696 695 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms