RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
VPS26B-207ENST00000532160 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
VPS26B-207ENST00000532160 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
VPS26B-207ENST00000532160 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
VPS26B-207ENST00000532160 DDX54Q8TDD1 881 aaKnown RBP13.03□□□□□ -0.32
VPS26B-207ENST00000532160 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
VPS26B-207ENST00000532160 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.32
VPS26B-207ENST00000532160 HOXC9P31274 260 aa13.02□□□□□ -0.33
VPS26B-207ENST00000532160 COG3Q96JB2 828 aa13.02□□□□□ -0.33
VPS26B-207ENST00000532160 GOLGB1Q14789 3259 aaKnown RBP13.02□□□□□ -0.33
VPS26B-207ENST00000532160 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
VPS26B-207ENST00000532160 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
VPS26B-207ENST00000532160 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
VPS26B-207ENST00000532160 MEGF6O75095 1541 aa13.01□□□□□ -0.33
VPS26B-207ENST00000532160 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
VPS26B-207ENST00000532160 AMPHP49418 695 aa13□□□□□ -0.33
VPS26B-207ENST00000532160 LY75O60449 1722 aa12.99□□□□□ -0.33
VPS26B-207ENST00000532160 NSD2O96028 1365 aa12.99□□□□□ -0.33
VPS26B-207ENST00000532160 KCNQ4P56696 695 aa12.99□□□□□ -0.33
VPS26B-207ENST00000532160 TMF1P82094 1093 aa12.99□□□□□ -0.33
VPS26B-207ENST00000532160 RRS1Q15050 365 aaKnown RBP12.99□□□□□ -0.33
VPS26B-207ENST00000532160 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
VPS26B-207ENST00000532160 CHD4Q14839 1912 aa12.98□□□□□ -0.33
VPS26B-207ENST00000532160 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
VPS26B-207ENST00000532160 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
VPS26B-207ENST00000532160 ARXQ96QS3 562 aa12.98□□□□□ -0.33
VPS26B-207ENST00000532160 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
VPS26B-207ENST00000532160 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
VPS26B-207ENST00000532160 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
VPS26B-207ENST00000532160 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
VPS26B-207ENST00000532160 FYB1O15117 783 aa12.97□□□□□ -0.33
VPS26B-207ENST00000532160 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
VPS26B-207ENST00000532160 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
VPS26B-207ENST00000532160 MAP3K5Q99683 1374 aa12.96□□□□□ -0.33
VPS26B-207ENST00000532160 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
VPS26B-207ENST00000532160 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
VPS26B-207ENST00000532160 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
VPS26B-207ENST00000532160 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
VPS26B-207ENST00000532160 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
VPS26B-207ENST00000532160 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
VPS26B-207ENST00000532160 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
VPS26B-207ENST00000532160 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
VPS26B-207ENST00000532160 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
VPS26B-207ENST00000532160 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
VPS26B-207ENST00000532160 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
VPS26B-207ENST00000532160 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
VPS26B-207ENST00000532160 CCNL1Q9UK58 526 aaPredicted RBP12.92□□□□□ -0.34
VPS26B-207ENST00000532160 INSRP06213 1382 aa12.92□□□□□ -0.34
VPS26B-207ENST00000532160 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
VPS26B-207ENST00000532160 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
VPS26B-207ENST00000532160 POLD1P28340 1107 aa12.91□□□□□ -0.34
VPS26B-207ENST00000532160 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
VPS26B-207ENST00000532160 FLT4P35916 1363 aa12.91□□□□□ -0.34
VPS26B-207ENST00000532160 CGNL1Q0VF96 1302 aa12.9□□□□□ -0.34
VPS26B-207ENST00000532160 C5P01031 1676 aa12.9□□□□□ -0.34
VPS26B-207ENST00000532160 NSD3Q9BZ95 1437 aa12.9□□□□□ -0.34
VPS26B-207ENST00000532160 TATP17735 454 aaPredicted RBP12.9□□□□□ -0.34
VPS26B-207ENST00000532160 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
VPS26B-207ENST00000532160 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
VPS26B-207ENST00000532160 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
VPS26B-207ENST00000532160 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
VPS26B-207ENST00000532160 GPR162Q16538 588 aa12.89□□□□□ -0.35
VPS26B-207ENST00000532160 NLGN2Q8NFZ4 835 aa12.89□□□□□ -0.35
VPS26B-207ENST00000532160 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
VPS26B-207ENST00000532160 ITGB4P16144 1822 aa12.89□□□□□ -0.35
VPS26B-207ENST00000532160 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
VPS26B-207ENST00000532160 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
VPS26B-207ENST00000532160 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
VPS26B-207ENST00000532160 CYP27B1O15528 508 aa12.88□□□□□ -0.35
VPS26B-207ENST00000532160 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
VPS26B-207ENST00000532160 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
VPS26B-207ENST00000532160 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
VPS26B-207ENST00000532160 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
VPS26B-207ENST00000532160 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
VPS26B-207ENST00000532160 NCAPD2Q15021 1401 aa12.87□□□□□ -0.35
VPS26B-207ENST00000532160 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
VPS26B-207ENST00000532160 MPRIPQ6WCQ1 1025 aa12.86□□□□□ -0.35
VPS26B-207ENST00000532160 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
VPS26B-207ENST00000532160 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
VPS26B-207ENST00000532160 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
VPS26B-207ENST00000532160 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
VPS26B-207ENST00000532160 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPS26B-207ENST00000532160 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
VPS26B-207ENST00000532160 PANK3Q9H999 370 aa12.84□□□□□ -0.35
VPS26B-207ENST00000532160 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
VPS26B-207ENST00000532160 SMIM5Q71RC9 77 aa12.83□□□□□ -0.36
VPS26B-207ENST00000532160 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
VPS26B-207ENST00000532160 PIGBQ92521 554 aa12.82□□□□□ -0.36
VPS26B-207ENST00000532160 C1QTNF8P60827 252 aa12.81□□□□□ -0.36
VPS26B-207ENST00000532160 CNGB1Q14028 1251 aaPredicted RBP12.81□□□□□ -0.36
VPS26B-207ENST00000532160 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
VPS26B-207ENST00000532160 EYA1Q99502 592 aa12.81□□□□□ -0.36
VPS26B-207ENST00000532160 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
VPS26B-207ENST00000532160 POLKQ9UBT6 870 aa12.8□□□□□ -0.36
VPS26B-207ENST00000532160 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
VPS26B-207ENST00000532160 PHF14O94880 888 aa12.79□□□□□ -0.36
VPS26B-207ENST00000532160 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
VPS26B-207ENST00000532160 FLAD1Q8NFF5 587 aa12.79□□□□□ -0.36
VPS26B-207ENST00000532160 AK7Q96M32 723 aa12.79□□□□□ -0.36
VPS26B-207ENST00000532160 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms