RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
PTP4A2-213ENST00000532001 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
PTP4A2-213ENST00000532001 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
PTP4A2-213ENST00000532001 SPATA31A1Q5TZJ5 1347 aa12.36□□□□□ -0.43
PTP4A2-213ENST00000532001 ROCK2O75116 1388 aaKnown RBP12.35□□□□□ -0.43
PTP4A2-213ENST00000532001 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
PTP4A2-213ENST00000532001 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
PTP4A2-213ENST00000532001 EVC2Q86UK5 1308 aa12.35□□□□□ -0.43
PTP4A2-213ENST00000532001 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
PTP4A2-213ENST00000532001 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
PTP4A2-213ENST00000532001 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
PTP4A2-213ENST00000532001 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
PTP4A2-213ENST00000532001 COL18A1P39060 1754 aa12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 CHRNA2Q15822 529 aa12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 COL5A2P05997 1499 aaPredicted RBP12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 LRP5O75197 1615 aa12.33□□□□□ -0.44
PTP4A2-213ENST00000532001 A0A0G2JS52 829 aa12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 PPP1R37O75864 691 aa12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 ZC3H6P61129 1189 aaKnown RBP12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 MYT1Q01538 1121 aa12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 DEFB132Q7Z7B7 95 aa12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
PTP4A2-213ENST00000532001 GCP02774 474 aa12.31□□□□□ -0.44
PTP4A2-213ENST00000532001 CABP1Q9NZU7 370 aa12.31□□□□□ -0.44
PTP4A2-213ENST00000532001 ABCC6O95255 1503 aa12.31□□□□□ -0.44
PTP4A2-213ENST00000532001 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
PTP4A2-213ENST00000532001 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
PTP4A2-213ENST00000532001 BAG6P46379 1132 aa12.3□□□□□ -0.44
PTP4A2-213ENST00000532001 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
PTP4A2-213ENST00000532001 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
PTP4A2-213ENST00000532001 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
PTP4A2-213ENST00000532001 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
PTP4A2-213ENST00000532001 RREB1Q92766 1687 aa12.29□□□□□ -0.44
PTP4A2-213ENST00000532001 CRB1P82279 1406 aa12.28□□□□□ -0.44
PTP4A2-213ENST00000532001 NFAT5O94916 1531 aa12.28□□□□□ -0.44
PTP4A2-213ENST00000532001 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
PTP4A2-213ENST00000532001 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
PTP4A2-213ENST00000532001 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
PTP4A2-213ENST00000532001 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
PTP4A2-213ENST00000532001 LRRC37A3O60309 1634 aa12.27□□□□□ -0.44
PTP4A2-213ENST00000532001 EVA1CP58658 441 aa12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 TCP11L2Q8N4U5 519 aa12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
PTP4A2-213ENST00000532001 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
PTP4A2-213ENST00000532001 KIF3CO14782 793 aa12.26□□□□□ -0.45
PTP4A2-213ENST00000532001 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
PTP4A2-213ENST00000532001 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
PTP4A2-213ENST00000532001 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
PTP4A2-213ENST00000532001 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
PTP4A2-213ENST00000532001 SBF2Q86WG5 1849 aa12.25□□□□□ -0.45
PTP4A2-213ENST00000532001 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 USP31Q70CQ4 1352 aa12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
PTP4A2-213ENST00000532001 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
PTP4A2-213ENST00000532001 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
PTP4A2-213ENST00000532001 ARHGEF25Q86VW2 580 aa12.23□□□□□ -0.45
PTP4A2-213ENST00000532001 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
PTP4A2-213ENST00000532001 LTN1O94822 1766 aa12.23□□□□□ -0.45
PTP4A2-213ENST00000532001 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 CAMKK2Q96RR4 588 aa12.22□□□□□ -0.45
PTP4A2-213ENST00000532001 BCL9O00512 1426 aa12.21□□□□□ -0.45
PTP4A2-213ENST00000532001 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.45
PTP4A2-213ENST00000532001 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
PTP4A2-213ENST00000532001 RIMBP2O15034 1052 aa12.21□□□□□ -0.45
PTP4A2-213ENST00000532001 TRIM37O94972 964 aa12.21□□□□□ -0.45
PTP4A2-213ENST00000532001 EMP3P54852 163 aa12.21□□□□□ -0.45
PTP4A2-213ENST00000532001 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-213ENST00000532001 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-213ENST00000532001 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
PTP4A2-213ENST00000532001 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-213ENST00000532001 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
PTP4A2-213ENST00000532001 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
PTP4A2-213ENST00000532001 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
PTP4A2-213ENST00000532001 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
PTP4A2-213ENST00000532001 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
PTP4A2-213ENST00000532001 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms