RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ELOAQ14241 798 aaKnown RBP5.27□□□□□ -1.57
CD44-234ENST00000531873 XP32Q5T750 250 aa5.27□□□□□ -1.57
CD44-234ENST00000531873 TMCO4Q5TGY1 634 aa5.27□□□□□ -1.57
CD44-234ENST00000531873 TMEM164Q5U3C3 297 aa5.27□□□□□ -1.57
CD44-234ENST00000531873 GPKOWQ92917 476 aaPredicted RBP eCLIP5.27□□□□□ -1.57
CD44-234ENST00000531873 GPSM3Q9Y4H4 160 aa5.27□□□□□ -1.57
CD44-234ENST00000531873 ADH1CP00326 375 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 SKIP12755 728 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 MFAP1P55081 439 aaKnown RBP5.26□□□□□ -1.57
CD44-234ENST00000531873 FOXK2Q01167 660 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 KRT76Q01546 638 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 PDXDC2PQ6P474 469 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 DEPDC4Q8N2C3 294 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 PHTF2Q8N3S3 785 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 VRTNQ9H8Y1 702 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 CHIC2Q9UKJ5 165 aa5.26□□□□□ -1.57
CD44-234ENST00000531873 PATL2C9JE40 543 aaKnown RBP5.25□□□□□ -1.57
CD44-234ENST00000531873 VARSP26640 1264 aaKnown RBP5.25□□□□□ -1.57
CD44-234ENST00000531873 RANGAP1P46060 587 aaPredicted RBP5.25□□□□□ -1.57
CD44-234ENST00000531873 PTK2Q05397 1052 aa5.25□□□□□ -1.57
CD44-234ENST00000531873 CRTC2Q53ET0 693 aaPredicted RBP5.25□□□□□ -1.57
CD44-234ENST00000531873 NBPF14Q5TI25 921 aa5.25□□□□□ -1.57
CD44-234ENST00000531873 SH3BP5LQ7L8J4 393 aa5.25□□□□□ -1.57
CD44-234ENST00000531873 UNC93B1Q9H1C4 597 aa5.25□□□□□ -1.57
CD44-234ENST00000531873 CEP126Q9P2H0 1117 aa5.25□□□□□ -1.57
CD44-234ENST00000531873 IVNS1ABPQ9Y6Y0 642 aa5.25□□□□□ -1.57
CD44-234ENST00000531873 FAM196BA6NMK8 535 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L15C9J2P7 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L10C9JJH3 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L13C9JLJ4 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L12C9JPN9 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L11C9JVI0 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L21D6R901 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L18D6R9N7 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L22D6RA61 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L17D6RBQ6 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L19D6RCP7 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L20D6RJB6 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 MAN1A2O60476 641 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 WDR4P57081 412 aaKnown RBP5.24□□□□□ -1.57
CD44-234ENST00000531873 USP17L24Q0WX57 530 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 NCOA4Q13772 614 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 GPAT2Q6NUI2 795 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 SH3RF1Q7Z6J0 888 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 ARMC2Q8NEN0 867 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 ADAM32Q8TC27 787 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 SLAIN2Q9P270 581 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 NOVA2Q9UNW9 492 aaKnown RBP5.24□□□□□ -1.57
CD44-234ENST00000531873 MTMR7Q9Y216 660 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 TLL2Q9Y6L7 1015 aa5.24□□□□□ -1.57
CD44-234ENST00000531873 PTK7Q13308 1070 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 PHLDB3Q6NSJ2 640 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 KANK3Q6NY19 840 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 RNF135Q8IUD6 432 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 GPR161Q8N6U8 529 aaKnown RBP5.23□□□□□ -1.57
CD44-234ENST00000531873 PLPP7Q8NBV4 271 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 MKRN1Q9UHC7 482 aaKnown RBP5.23□□□□□ -1.57
CD44-234ENST00000531873 PCDHB9Q9Y5E1 797 aa5.23□□□□□ -1.57
CD44-234ENST00000531873 FAM69CQ0P6D2 419 aa5.22□□□□□ -1.57
CD44-234ENST00000531873 SLFNL1Q499Z3 407 aa5.22□□□□□ -1.57
CD44-234ENST00000531873 ZNF385CQ66K41 422 aaPredicted RBP5.22□□□□□ -1.57
CD44-234ENST00000531873 ARHGAP9Q9BRR9 750 aa5.22□□□□□ -1.57
CD44-234ENST00000531873 GNEQ9Y223 722 aaKnown RBP5.22□□□□□ -1.57
CD44-234ENST00000531873 ARHGEF15O94989 841 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 MCCD1P59942 119 aaPredicted RBP5.21□□□□□ -1.58
CD44-234ENST00000531873 CLDN10P78369 228 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 TSGA10IPQ3SY00 556 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 C4orf48Q5BLP8 95 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 SND1Q7KZF4 910 aaKnown RBP eCLIP5.21□□□□□ -1.58
CD44-234ENST00000531873 ZNF511Q8NB15 262 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 NANOS1Q8WY41 292 aaKnown RBP5.21□□□□□ -1.58
CD44-234ENST00000531873 BAP1Q92560 729 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 ZNF592Q92610 1267 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 CNTNAP3BQ96NU0 1288 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 CCDC85AQ96PX6 553 aaPredicted RBP5.21□□□□□ -1.58
CD44-234ENST00000531873 CDK15Q96Q40 435 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 CNTNAP3Q9BZ76 1288 aa5.21□□□□□ -1.58
CD44-234ENST00000531873 ATP5J2-PTCD1G3V325 749 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 DKK1O94907 266 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 SLURP2P0DP57 97 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 RASA1P20936 1047 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 IRS1P35568 1242 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 FOXD4L5Q5VV16 416 aaPredicted RBP5.2□□□□□ -1.58
CD44-234ENST00000531873 TXNDC2Q86VQ3 553 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 FOXD4L4Q8WXT5 416 aaPredicted RBP5.2□□□□□ -1.58
CD44-234ENST00000531873 CARD14Q9BXL6 1004 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 KIAA1024Q9UPX6 916 aa5.2□□□□□ -1.58
CD44-234ENST00000531873 SOS2Q07890 1332 aaPredicted RBP5.2□□□□□ -1.58
CD44-234ENST00000531873 MAGEB6P1A0A0J9YX57 407 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 LZTS3O60299 673 aaPredicted RBP5.19□□□□□ -1.58
CD44-234ENST00000531873 ADAM23O75077 832 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 ZIC2O95409 532 aaPredicted RBP5.19□□□□□ -1.58
CD44-234ENST00000531873 SSFA2P28290 1259 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 EML3Q32P44 896 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 MAP7D1Q3KQU3 841 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 LINC01559Q495D7 138 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 ERFEQ4G0M1 354 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 ZBTB33Q86T24 672 aa5.19□□□□□ -1.58
CD44-234ENST00000531873 OGFOD1Q8N543 542 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms