RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 KCNQ4P56696 695 aa28.2■■■□□ 2.1
HIPK3-205ENST00000531504 IP6K1Q92551 441 aa28.2■■■□□ 2.1
HIPK3-205ENST00000531504 MSH5O43196 834 aa28.19■■■□□ 2.1
HIPK3-205ENST00000531504 CCNL1Q9UK58 526 aaPredicted RBP28.19■■■□□ 2.1
HIPK3-205ENST00000531504 LTV1Q96GA3 475 aaPredicted RBP28.18■■■□□ 2.1
HIPK3-205ENST00000531504 TERF2IPQ9NYB0 399 aa28.18■■■□□ 2.1
HIPK3-205ENST00000531504 ATP10DQ9P241 1426 aa28.18■■■□□ 2.1
HIPK3-205ENST00000531504 NSD2O96028 1365 aa28.17■■■□□ 2.1
HIPK3-205ENST00000531504 USP47Q96K76 1375 aa28.14■■■□□ 2.1
HIPK3-205ENST00000531504 HMGB2P26583 209 aaKnown RBP28.14■■■□□ 2.1
HIPK3-205ENST00000531504 A0A1W2PP64 1363 aa28.13■■■□□ 2.09
HIPK3-205ENST00000531504 COL23A1Q86Y22 540 aaPredicted RBP28.13■■■□□ 2.09
HIPK3-205ENST00000531504 ZCRB1Q8TBF4 217 aaKnown RBP28.13■■■□□ 2.09
HIPK3-205ENST00000531504 SLC12A5Q9H2X9 1139 aa28.13■■■□□ 2.09
HIPK3-205ENST00000531504 GPBP1L1Q9HC44 474 aaPredicted RBP28.13■■■□□ 2.09
HIPK3-205ENST00000531504 C5P01031 1676 aa28.12■■■□□ 2.09
HIPK3-205ENST00000531504 CD2APQ9Y5K6 639 aa28.11■■■□□ 2.09
HIPK3-205ENST00000531504 RGPD2P0DJD1 1756 aa28.1■■■□□ 2.09
HIPK3-205ENST00000531504 MSL1Q68DK7 614 aa28.09■■■□□ 2.09
HIPK3-205ENST00000531504 SIN3AQ96ST3 1273 aa28.09■■■□□ 2.09
HIPK3-205ENST00000531504 MEGF6O75095 1541 aa28.08■■■□□ 2.09
HIPK3-205ENST00000531504 HOXC9P31274 260 aa28.07■■■□□ 2.08
HIPK3-205ENST00000531504 AMPHP49418 695 aa28.07■■■□□ 2.08
HIPK3-205ENST00000531504 NEUROD1Q13562 356 aa28.07■■■□□ 2.08
HIPK3-205ENST00000531504 FLAD1Q8NFF5 587 aa28.07■■■□□ 2.08
HIPK3-205ENST00000531504 CARD11Q9BXL7 1154 aa28.07■■■□□ 2.08
HIPK3-205ENST00000531504 COG3Q96JB2 828 aa28.06■■■□□ 2.08
HIPK3-205ENST00000531504 MAP3K19Q56UN5 1328 aa28.06■■■□□ 2.08
HIPK3-205ENST00000531504 ADCY9O60503 1353 aa28.05■■■□□ 2.08
HIPK3-205ENST00000531504 HSPA6P17066 643 aa28.05■■■□□ 2.08
HIPK3-205ENST00000531504 CGNL1Q0VF96 1302 aa28.05■■■□□ 2.08
HIPK3-205ENST00000531504 PUS7Q96PZ0 661 aaKnown RBP28.05■■■□□ 2.08
HIPK3-205ENST00000531504 TAF1LQ8IZX4 1826 aa28.04■■■□□ 2.08
HIPK3-205ENST00000531504 RTL1A6NKG5 1358 aa28.02■■■□□ 2.08
HIPK3-205ENST00000531504 ZNF526Q8TF50 670 aaPredicted RBP28■■■□□ 2.07
HIPK3-205ENST00000531504 RAPGEF4Q8WZA2 1011 aa28■■■□□ 2.07
HIPK3-205ENST00000531504 SMG6Q86US8 1419 aaKnown RBP28■■■□□ 2.07
HIPK3-205ENST00000531504 PALLDQ8WX93 1383 aa27.98■■■□□ 2.07
HIPK3-205ENST00000531504 C4BP0C0L5 1744 aa27.96■■■□□ 2.07
HIPK3-205ENST00000531504 PCDH11XQ9BZA7 1347 aa27.95■■■□□ 2.07
HIPK3-205ENST00000531504 PCDH11YQ9BZA8 1340 aa27.95■■■□□ 2.07
HIPK3-205ENST00000531504 NSD3Q9BZ95 1437 aa27.95■■■□□ 2.07
HIPK3-205ENST00000531504 TATP17735 454 aaPredicted RBP27.94■■■□□ 2.06
HIPK3-205ENST00000531504 NBPF6Q5VWK0 638 aa27.94■■■□□ 2.06
HIPK3-205ENST00000531504 AK7Q96M32 723 aa27.94■■■□□ 2.06
HIPK3-205ENST00000531504 NBPF4Q96M43 638 aa27.94■■■□□ 2.06
HIPK3-205ENST00000531504 IGSF1Q8N6C5 1336 aa27.93■■■□□ 2.06
HIPK3-205ENST00000531504 UBR3Q6ZT12 1888 aa27.91■■■□□ 2.06
HIPK3-205ENST00000531504 FBLN1P23142 703 aa27.91■■■□□ 2.06
HIPK3-205ENST00000531504 USHBP1Q8N6Y0 703 aa27.91■■■□□ 2.06
HIPK3-205ENST00000531504 SMARCC1Q92922 1105 aaPredicted RBP27.91■■■□□ 2.06
HIPK3-205ENST00000531504 TOGARAM1Q9Y4F4 1720 aa27.91■■■□□ 2.06
HIPK3-205ENST00000531504 MPRIPQ6WCQ1 1025 aa27.9■■■□□ 2.06
HIPK3-205ENST00000531504 ITGB4P16144 1822 aa27.9■■■□□ 2.06
HIPK3-205ENST00000531504 RRS1Q15050 365 aaKnown RBP27.88■■■□□ 2.05
HIPK3-205ENST00000531504 SLC24A1O60721 1099 aa27.87■■■□□ 2.05
HIPK3-205ENST00000531504 PHF14O94880 888 aa27.86■■■□□ 2.05
HIPK3-205ENST00000531504 CICQ96RK0 1608 aaPredicted RBP27.85■■■□□ 2.05
HIPK3-205ENST00000531504 WWC3Q9ULE0 1092 aa27.85■■■□□ 2.05
HIPK3-205ENST00000531504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.84■■■□□ 2.05
HIPK3-205ENST00000531504 KIF3CO14782 793 aa27.84■■■□□ 2.05
HIPK3-205ENST00000531504 SSFA2P28290 1259 aa27.84■■■□□ 2.05
HIPK3-205ENST00000531504 INSRP06213 1382 aa27.84■■■□□ 2.05
HIPK3-205ENST00000531504 PKD1L3Q7Z443 1732 aa27.83■■■□□ 2.05
HIPK3-205ENST00000531504 APLP1P51693 650 aa27.82■■■□□ 2.04
HIPK3-205ENST00000531504 KIF24Q5T7B8 1368 aa27.82■■■□□ 2.04
HIPK3-205ENST00000531504 FLT4P35916 1363 aa27.81■■■□□ 2.04
HIPK3-205ENST00000531504 CYP27B1O15528 508 aa27.8■■■□□ 2.04
HIPK3-205ENST00000531504 AMIGO3Q86WK7 504 aa27.8■■■□□ 2.04
HIPK3-205ENST00000531504 TESK2Q96S53 571 aa27.8■■■□□ 2.04
HIPK3-205ENST00000531504 KIF20BQ96Q89 1820 aa27.79■■■□□ 2.04
HIPK3-205ENST00000531504 GGNBP2Q9H3C7 697 aa27.79■■■□□ 2.04
HIPK3-205ENST00000531504 MAP2P11137 1827 aaKnown RBP27.78■■■□□ 2.04
HIPK3-205ENST00000531504 TONSLQ96HA7 1378 aa27.78■■■□□ 2.04
HIPK3-205ENST00000531504 FYB1O15117 783 aa27.78■■■□□ 2.04
HIPK3-205ENST00000531504 HSP90AB2PQ58FF8 381 aa27.78■■■□□ 2.04
HIPK3-205ENST00000531504 ST20-MTHFSA0A0A6YYL1 179 aa27.76■■■□□ 2.03
HIPK3-205ENST00000531504 PIGBQ92521 554 aa27.76■■■□□ 2.03
HIPK3-205ENST00000531504 KIF13BQ9NQT8 1826 aa27.76■■■□□ 2.03
HIPK3-205ENST00000531504 LOC102724428A0A0B4J2F2 783 aa27.75■■■□□ 2.03
HIPK3-205ENST00000531504 TOMM70O94826 608 aa27.75■■■□□ 2.03
HIPK3-205ENST00000531504 SIK1P57059 783 aa27.75■■■□□ 2.03
HIPK3-205ENST00000531504 GNPATO15228 680 aa27.73■■■□□ 2.03
HIPK3-205ENST00000531504 SMIM5Q71RC9 77 aa27.73■■■□□ 2.03
HIPK3-205ENST00000531504 LINC00116Q8NCU8 138 aa27.73■■■□□ 2.03
HIPK3-205ENST00000531504 PXDNLA1KZ92 1463 aa27.72■■■□□ 2.03
HIPK3-205ENST00000531504 NKX1-1Q15270 411 aaPredicted RBP27.72■■■□□ 2.03
HIPK3-205ENST00000531504 SPG7Q9UQ90 795 aa27.72■■■□□ 2.03
HIPK3-205ENST00000531504 TMOD3Q9NYL9 352 aa27.71■■■□□ 2.03
HIPK3-205ENST00000531504 KIAA1551Q9HCM1 1747 aa27.7■■■□□ 2.03
HIPK3-205ENST00000531504 MMP10P09238 476 aa27.7■■■□□ 2.02
HIPK3-205ENST00000531504 N4BP2Q86UW6 1770 aaPredicted RBP27.7■■■□□ 2.02
HIPK3-205ENST00000531504 TGFB2P61812 414 aa27.69■■■□□ 2.02
HIPK3-205ENST00000531504 NCAPD2Q15021 1401 aa27.68■■■□□ 2.02
HIPK3-205ENST00000531504 ATP6V1AP38606 617 aa27.67■■■□□ 2.02
HIPK3-205ENST00000531504 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
HIPK3-205ENST00000531504 DNAJC5GQ8N7S2 189 aa27.67■■■□□ 2.02
HIPK3-205ENST00000531504 BCS1LQ9Y276 419 aa27.67■■■□□ 2.02
HIPK3-205ENST00000531504 WDR90Q96KV7 1748 aa27.67■■■□□ 2.02
HIPK3-205ENST00000531504 TMF1P82094 1093 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms