RNA–Protein interactions for RNA: ENST00000531461.5

ACER3-211, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-211ENST00000531461 QSER1Q2KHR3 1735 aa33.5■■■□□ 2.95
ACER3-211ENST00000531461 DOT1LQ8TEK3 1739 aa33.5■■■□□ 2.95
ACER3-211ENST00000531461 SGIP1Q9BQI5 828 aa33.5■■■□□ 2.95
ACER3-211ENST00000531461 NBPF6Q5VWK0 638 aa33.49■■■□□ 2.95
ACER3-211ENST00000531461 SMG6Q86US8 1419 aaKnown RBP33.49■■■□□ 2.95
ACER3-211ENST00000531461 NBPF4Q96M43 638 aa33.49■■■□□ 2.95
ACER3-211ENST00000531461 LY75O60449 1722 aa33.48■■■□□ 2.95
ACER3-211ENST00000531461 INSRP06213 1382 aa33.47■■■□□ 2.95
ACER3-211ENST00000531461 ZNF827Q17R98 1081 aa33.46■■■□□ 2.95
ACER3-211ENST00000531461 FLT4P35916 1363 aa33.46■■■□□ 2.95
ACER3-211ENST00000531461 NSD2O96028 1365 aa33.45■■■□□ 2.94
ACER3-211ENST00000531461 YY1P25490 414 aa33.44■■■□□ 2.94
ACER3-211ENST00000531461 PRIM1P49642 420 aaKnown RBP33.44■■■□□ 2.94
ACER3-211ENST00000531461 AKT1S1Q96B36 256 aa33.44■■■□□ 2.94
ACER3-211ENST00000531461 CARD14Q9BXL6 1004 aa33.43■■■□□ 2.94
ACER3-211ENST00000531461 HSP90AB2PQ58FF8 381 aa33.41■■■□□ 2.94
ACER3-211ENST00000531461 RAPGEF4Q8WZA2 1011 aa33.41■■■□□ 2.94
ACER3-211ENST00000531461 SYTL4Q96C24 671 aaPredicted RBP33.41■■■□□ 2.94
ACER3-211ENST00000531461 SYT17Q9BSW7 474 aa33.4■■■□□ 2.94
ACER3-211ENST00000531461 NSD3Q9BZ95 1437 aa33.39■■■□□ 2.94
ACER3-211ENST00000531461 SLC16A10Q8TF71 515 aa33.39■■■□□ 2.94
ACER3-211ENST00000531461 FHDC1Q9C0D6 1143 aaPredicted RBP33.39■■■□□ 2.94
ACER3-211ENST00000531461 COL24A1Q17RW2 1714 aa33.39■■■□□ 2.94
ACER3-211ENST00000531461 MAP3K5Q99683 1374 aa33.37■■■□□ 2.93
ACER3-211ENST00000531461 ANKRD26Q9UPS8 1709 aa33.37■■■□□ 2.93
ACER3-211ENST00000531461 USHBP1Q8N6Y0 703 aa33.37■■■□□ 2.93
ACER3-211ENST00000531461 TATP17735 454 aaPredicted RBP33.36■■■□□ 2.93
ACER3-211ENST00000531461 TUBGCP6Q96RT7 1819 aa33.36■■■□□ 2.93
ACER3-211ENST00000531461 ARXQ96QS3 562 aa33.35■■■□□ 2.93
ACER3-211ENST00000531461 UTRNP46939 3433 aa33.34■■■□□ 2.93
ACER3-211ENST00000531461 PCDH11XQ9BZA7 1347 aa33.33■■■□□ 2.93
ACER3-211ENST00000531461 PCDH11YQ9BZA8 1340 aa33.33■■■□□ 2.93
ACER3-211ENST00000531461 NCAPD2Q15021 1401 aa33.33■■■□□ 2.93
ACER3-211ENST00000531461 PNPLA7Q6ZV29 1317 aa33.32■■■□□ 2.93
ACER3-211ENST00000531461 EMILIN1Q9Y6C2 1016 aa33.31■■■□□ 2.92
ACER3-211ENST00000531461 MAP2P11137 1827 aaKnown RBP33.3■■■□□ 2.92
ACER3-211ENST00000531461 PKD1L3Q7Z443 1732 aa33.3■■■□□ 2.92
ACER3-211ENST00000531461 TFCP2L1Q9NZI6 479 aa33.29■■■□□ 2.92
ACER3-211ENST00000531461 KCNQ4P56696 695 aa33.28■■■□□ 2.92
ACER3-211ENST00000531461 CCNL1Q9UK58 526 aaPredicted RBP33.28■■■□□ 2.92
ACER3-211ENST00000531461 WASHC2AQ641Q2 1341 aa33.27■■■□□ 2.92
ACER3-211ENST00000531461 HMGB2P26583 209 aaKnown RBP33.26■■■□□ 2.91
ACER3-211ENST00000531461 CHD4Q14839 1912 aa33.24■■■□□ 2.91
ACER3-211ENST00000531461 CYP27B1O15528 508 aa33.24■■■□□ 2.91
ACER3-211ENST00000531461 PCGF6Q9BYE7 350 aa33.24■■■□□ 2.91
ACER3-211ENST00000531461 ITGB4P16144 1822 aa33.23■■■□□ 2.91
ACER3-211ENST00000531461 POLD1P28340 1107 aa33.23■■■□□ 2.91
ACER3-211ENST00000531461 C5P01031 1676 aa33.22■■■□□ 2.91
ACER3-211ENST00000531461 TOGARAM1Q9Y4F4 1720 aa33.22■■■□□ 2.91
ACER3-211ENST00000531461 TAF1LQ8IZX4 1826 aa33.21■■■□□ 2.91
ACER3-211ENST00000531461 NKX1-1Q15270 411 aaPredicted RBP33.19■■■□□ 2.9
ACER3-211ENST00000531461 PPM1GO15355 546 aaPredicted RBP33.18■■■□□ 2.9
ACER3-211ENST00000531461 POLKQ9UBT6 870 aa33.18■■■□□ 2.9
ACER3-211ENST00000531461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.17■■■□□ 2.9
ACER3-211ENST00000531461 PALLDQ8WX93 1383 aa33.17■■■□□ 2.9
ACER3-211ENST00000531461 EIF4G2P78344 907 aaKnown RBP eCLIP33.15■■■□□ 2.9
ACER3-211ENST00000531461 MPRIPQ6WCQ1 1025 aa33.15■■■□□ 2.9
ACER3-211ENST00000531461 EYA1Q99502 592 aa33.15■■■□□ 2.9
ACER3-211ENST00000531461 PLEKHG2Q9H7P9 1386 aa33.15■■■□□ 2.9
ACER3-211ENST00000531461 SPG7Q9UQ90 795 aa33.15■■■□□ 2.9
ACER3-211ENST00000531461 SMARCC1Q92922 1105 aaPredicted RBP33.14■■■□□ 2.9
ACER3-211ENST00000531461 COL23A1Q86Y22 540 aaPredicted RBP33.13■■■□□ 2.89
ACER3-211ENST00000531461 FLAD1Q8NFF5 587 aa33.1■■■□□ 2.89
ACER3-211ENST00000531461 GOLGB1Q14789 3259 aaKnown RBP33.08■■■□□ 2.89
ACER3-211ENST00000531461 C4BP0C0L5 1744 aa33.08■■■□□ 2.89
ACER3-211ENST00000531461 HSPA5P11021 654 aaKnown RBP33.08■■■□□ 2.89
ACER3-211ENST00000531461 PIGBQ92521 554 aa33.08■■■□□ 2.89
ACER3-211ENST00000531461 POLR3GLQ9BT43 218 aa33.08■■■□□ 2.89
ACER3-211ENST00000531461 EIF4A2Q14240 407 aaKnown RBP33.06■■■□□ 2.88
ACER3-211ENST00000531461 ZNF784Q8NCA9 323 aaPredicted RBP33.06■■■□□ 2.88
ACER3-211ENST00000531461 MSH5O43196 834 aa33.05■■■□□ 2.88
ACER3-211ENST00000531461 UBR3Q6ZT12 1888 aa33.04■■■□□ 2.88
ACER3-211ENST00000531461 GPR162Q16538 588 aa33.04■■■□□ 2.88
ACER3-211ENST00000531461 IFNL2Q8IZJ0 200 aa33.04■■■□□ 2.88
ACER3-211ENST00000531461 PANK3Q9H999 370 aa33.04■■■□□ 2.88
ACER3-211ENST00000531461 KLHL34Q8N239 644 aa33.03■■■□□ 2.88
ACER3-211ENST00000531461 PHKG2P15735 406 aa33.02■■■□□ 2.88
ACER3-211ENST00000531461 IGSF1Q8N6C5 1336 aa33.01■■■□□ 2.87
ACER3-211ENST00000531461 TNNT2P45379 298 aaPredicted RBP33■■■□□ 2.87
ACER3-211ENST00000531461 NLGN2Q8NFZ4 835 aa33■■■□□ 2.87
ACER3-211ENST00000531461 TMOD3Q9NYL9 352 aa32.99■■■□□ 2.87
ACER3-211ENST00000531461 LOC102724428A0A0B4J2F2 783 aa32.98■■■□□ 2.87
ACER3-211ENST00000531461 SIK1P57059 783 aa32.98■■■□□ 2.87
ACER3-211ENST00000531461 AK7Q96M32 723 aa32.98■■■□□ 2.87
ACER3-211ENST00000531461 CCER1Q8TC90 406 aaPredicted RBP32.96■■■□□ 2.87
ACER3-211ENST00000531461 MSL1Q68DK7 614 aa32.95■■■□□ 2.87
ACER3-211ENST00000531461 CD2APQ9Y5K6 639 aa32.94■■■□□ 2.86
ACER3-211ENST00000531461 SSFA2P28290 1259 aa32.93■■■□□ 2.86
ACER3-211ENST00000531461 AMIGO3Q86WK7 504 aa32.93■■■□□ 2.86
ACER3-211ENST00000531461 ASAP1Q9ULH1 1129 aa32.93■■■□□ 2.86
ACER3-211ENST00000531461 ZNF831Q5JPB2 1677 aa32.92■■■□□ 2.86
ACER3-211ENST00000531461 LINC00116Q8NCU8 138 aa32.91■■■□□ 2.86
ACER3-211ENST00000531461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.9■■■□□ 2.86
ACER3-211ENST00000531461 ERVV-2B6SEH9 535 aa32.9■■■□□ 2.86
ACER3-211ENST00000531461 HSP90AB1P08238 724 aaKnown RBP32.9■■■□□ 2.86
ACER3-211ENST00000531461 ATG3Q9NT62 314 aa32.9■■■□□ 2.86
ACER3-211ENST00000531461 GRIN3BO60391 1043 aa32.89■■■□□ 2.86
ACER3-211ENST00000531461 MORC1Q86VD1 984 aa32.88■■■□□ 2.85
ACER3-211ENST00000531461 PELP1Q8IZL8 1130 aaKnown RBP32.88■■■□□ 2.85
ACER3-211ENST00000531461 DCAF5Q96JK2 942 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms