RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 TNNT1P13805 278 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
LRRK1-207ENST00000531270 BLOC1S2Q6QNY1 142 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
LRRK1-207ENST00000531270 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 CFAP45Q9UL16 551 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 CAMK4Q16566 473 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 ARHGAP29Q52LW3 1261 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 PPP4R3AQ6IN85 833 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 GCC1Q96CN9 775 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 CETN2P41208 172 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 TNIP1Q15025 636 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 TRMT1LQ7Z2T5 733 aaKnown RBP17.16■□□□□ 0.34
LRRK1-207ENST00000531270 CRACR2BQ8N4Y2 399 aaPredicted RBP17.16■□□□□ 0.34
LRRK1-207ENST00000531270 ZNF397Q8NF99 534 aaPredicted RBP17.16■□□□□ 0.34
LRRK1-207ENST00000531270 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
LRRK1-207ENST00000531270 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 UQCRHLA0A096LP55 91 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 UQCRHP07919 91 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
LRRK1-207ENST00000531270 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 IGHMBP2P38935 993 aaKnown RBP17.15■□□□□ 0.34
LRRK1-207ENST00000531270 AIDAQ96BJ3 306 aa17.15■□□□□ 0.34
LRRK1-207ENST00000531270 POLR3DP05423 398 aaPredicted RBP17.14■□□□□ 0.33
LRRK1-207ENST00000531270 CEP63Q96MT8 703 aa17.14■□□□□ 0.33
LRRK1-207ENST00000531270 STAMBPO95630 424 aa17.14■□□□□ 0.33
LRRK1-207ENST00000531270 SEC63Q9UGP8 760 aaKnown RBP17.14■□□□□ 0.33
LRRK1-207ENST00000531270 NUP62CLQ9H1M0 184 aa17.14■□□□□ 0.33
LRRK1-207ENST00000531270 AAMPQ13685 434 aa17.14■□□□□ 0.33
LRRK1-207ENST00000531270 KLHL10Q6JEL2 608 aa17.14■□□□□ 0.33
LRRK1-207ENST00000531270 PUS7Q96PZ0 661 aaKnown RBP17.14■□□□□ 0.33
LRRK1-207ENST00000531270 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
LRRK1-207ENST00000531270 BCCIPQ9P287 314 aaKnown RBP eCLIP17.14■□□□□ 0.33
LRRK1-207ENST00000531270 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
LRRK1-207ENST00000531270 CEP126Q9P2H0 1117 aa17.13■□□□□ 0.33
LRRK1-207ENST00000531270 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
LRRK1-207ENST00000531270 SRGAP3O43295 1099 aa17.13■□□□□ 0.33
LRRK1-207ENST00000531270 XPCQ01831 940 aaPredicted RBP17.13■□□□□ 0.33
LRRK1-207ENST00000531270 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
LRRK1-207ENST00000531270 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
LRRK1-207ENST00000531270 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
LRRK1-207ENST00000531270 GIMAP7Q8NHV1 300 aa17.13■□□□□ 0.33
LRRK1-207ENST00000531270 DNAI2Q9GZS0 605 aa17.12■□□□□ 0.33
LRRK1-207ENST00000531270 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-207ENST00000531270 SPA17Q15506 151 aa17.12■□□□□ 0.33
LRRK1-207ENST00000531270 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
LRRK1-207ENST00000531270 CTNNA3Q9UI47 895 aa17.12■□□□□ 0.33
LRRK1-207ENST00000531270 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
LRRK1-207ENST00000531270 TICAM2Q86XR7 235 aa17.12■□□□□ 0.33
LRRK1-207ENST00000531270 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
LRRK1-207ENST00000531270 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
LRRK1-207ENST00000531270 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
LRRK1-207ENST00000531270 WASF1Q92558 559 aa17.11■□□□□ 0.33
LRRK1-207ENST00000531270 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
LRRK1-207ENST00000531270 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 CRACR2AQ9BSW2 395 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 MKNK2Q9HBH9 465 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 CA8P35219 290 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 IFFO1Q0D2I5 559 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
LRRK1-207ENST00000531270 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 SERPINA10Q9UK55 444 aa17.1■□□□□ 0.33
LRRK1-207ENST00000531270 TSG101Q99816 390 aa17.09■□□□□ 0.33
LRRK1-207ENST00000531270 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.09■□□□□ 0.33
LRRK1-207ENST00000531270 CEP131Q9UPN4 1083 aa17.09■□□□□ 0.33
LRRK1-207ENST00000531270 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
LRRK1-207ENST00000531270 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
LRRK1-207ENST00000531270 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
LRRK1-207ENST00000531270 CTNNA2P26232 953 aa17.09■□□□□ 0.33
LRRK1-207ENST00000531270 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
LRRK1-207ENST00000531270 NACADO15069 1562 aa17.08■□□□□ 0.33
LRRK1-207ENST00000531270 LUZP1Q86V48 1076 aa17.08■□□□□ 0.33
LRRK1-207ENST00000531270 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.33
LRRK1-207ENST00000531270 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
LRRK1-207ENST00000531270 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
LRRK1-207ENST00000531270 HOOK3Q86VS8 718 aa17.08■□□□□ 0.32
LRRK1-207ENST00000531270 ANKIB1Q9P2G1 1089 aa17.08■□□□□ 0.32
LRRK1-207ENST00000531270 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
LRRK1-207ENST00000531270 WDHD1O75717 1129 aaPredicted RBP17.08■□□□□ 0.32
LRRK1-207ENST00000531270 USP8P40818 1118 aa17.08■□□□□ 0.32
LRRK1-207ENST00000531270 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.32
LRRK1-207ENST00000531270 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
LRRK1-207ENST00000531270 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
LRRK1-207ENST00000531270 SPTY2D1Q68D10 685 aaPredicted RBP17.07■□□□□ 0.32
LRRK1-207ENST00000531270 UBXN4Q92575 508 aa17.07■□□□□ 0.32
LRRK1-207ENST00000531270 FERMT2Q96AC1 680 aa17.07■□□□□ 0.32
LRRK1-207ENST00000531270 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
LRRK1-207ENST00000531270 SHTN1A0MZ66 631 aa17.06■□□□□ 0.32
LRRK1-207ENST00000531270 CASQ1P31415 396 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms