RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 SYT17Q9BSW7 474 aa22.08■■□□□ 1.13
CHMP4A-204ENST00000530996 CDCA8Q53HL2 280 aa22.07■■□□□ 1.12
CHMP4A-204ENST00000530996 RAPGEF4Q8WZA2 1011 aa22.07■■□□□ 1.12
CHMP4A-204ENST00000530996 KCNQ4P56696 695 aa22.06■■□□□ 1.12
CHMP4A-204ENST00000530996 TFCP2L1Q9NZI6 479 aa22.06■■□□□ 1.12
CHMP4A-204ENST00000530996 FYB1O15117 783 aa22.05■■□□□ 1.12
CHMP4A-204ENST00000530996 SGIP1Q9BQI5 828 aa22.05■■□□□ 1.12
CHMP4A-204ENST00000530996 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
CHMP4A-204ENST00000530996 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
CHMP4A-204ENST00000530996 NSD2O96028 1365 aa22.03■■□□□ 1.12
CHMP4A-204ENST00000530996 FLT4P35916 1363 aa22.03■■□□□ 1.12
CHMP4A-204ENST00000530996 POLD1P28340 1107 aa22.03■■□□□ 1.12
CHMP4A-204ENST00000530996 AKT1S1Q96B36 256 aa22.03■■□□□ 1.12
CHMP4A-204ENST00000530996 KAT6BQ8WYB5 2073 aa22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 TATP17735 454 aaPredicted RBP22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 CCNL1Q9UK58 526 aaPredicted RBP22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 CGNL1Q0VF96 1302 aa22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 PNPLA7Q6ZV29 1317 aa22.02■■□□□ 1.12
CHMP4A-204ENST00000530996 RGPD2P0DJD1 1756 aa22.02■■□□□ 1.11
CHMP4A-204ENST00000530996 SHANK3Q9BYB0 1731 aa22.01■■□□□ 1.11
CHMP4A-204ENST00000530996 MSH5O43196 834 aa22.01■■□□□ 1.11
CHMP4A-204ENST00000530996 PCDH11XQ9BZA7 1347 aa22.01■■□□□ 1.11
CHMP4A-204ENST00000530996 PCDH11YQ9BZA8 1340 aa22.01■■□□□ 1.11
CHMP4A-204ENST00000530996 INSRP06213 1382 aa21.99■■□□□ 1.11
CHMP4A-204ENST00000530996 HSP90AB2PQ58FF8 381 aa21.99■■□□□ 1.11
CHMP4A-204ENST00000530996 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
CHMP4A-204ENST00000530996 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
CHMP4A-204ENST00000530996 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
CHMP4A-204ENST00000530996 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
CHMP4A-204ENST00000530996 GPR162Q16538 588 aa21.96■■□□□ 1.11
CHMP4A-204ENST00000530996 POLR3GLQ9BT43 218 aa21.96■■□□□ 1.11
CHMP4A-204ENST00000530996 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
CHMP4A-204ENST00000530996 KIF24Q5T7B8 1368 aa21.96■■□□□ 1.11
CHMP4A-204ENST00000530996 QSER1Q2KHR3 1735 aa21.95■■□□□ 1.1
CHMP4A-204ENST00000530996 LY75O60449 1722 aa21.94■■□□□ 1.1
CHMP4A-204ENST00000530996 ZNF784Q8NCA9 323 aaPredicted RBP21.93■■□□□ 1.1
CHMP4A-204ENST00000530996 PALLDQ8WX93 1383 aa21.93■■□□□ 1.1
CHMP4A-204ENST00000530996 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
CHMP4A-204ENST00000530996 CARD14Q9BXL6 1004 aa21.92■■□□□ 1.1
CHMP4A-204ENST00000530996 MSL1Q68DK7 614 aa21.91■■□□□ 1.1
CHMP4A-204ENST00000530996 MPRIPQ6WCQ1 1025 aa21.91■■□□□ 1.1
CHMP4A-204ENST00000530996 UTRNP46939 3433 aa21.89■■□□□ 1.1
CHMP4A-204ENST00000530996 PCGF6Q9BYE7 350 aa21.89■■□□□ 1.09
CHMP4A-204ENST00000530996 NLGN2Q8NFZ4 835 aa21.88■■□□□ 1.09
CHMP4A-204ENST00000530996 CYP27B1O15528 508 aa21.87■■□□□ 1.09
CHMP4A-204ENST00000530996 COL23A1Q86Y22 540 aaPredicted RBP21.87■■□□□ 1.09
CHMP4A-204ENST00000530996 C5P01031 1676 aa21.87■■□□□ 1.09
CHMP4A-204ENST00000530996 AK7Q96M32 723 aa21.86■■□□□ 1.09
CHMP4A-204ENST00000530996 SPG7Q9UQ90 795 aa21.86■■□□□ 1.09
CHMP4A-204ENST00000530996 HMGB2P26583 209 aaKnown RBP21.85■■□□□ 1.09
CHMP4A-204ENST00000530996 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
CHMP4A-204ENST00000530996 TIMELESSQ9UNS1 1208 aa21.85■■□□□ 1.09
CHMP4A-204ENST00000530996 PKD1L3Q7Z443 1732 aa21.85■■□□□ 1.09
CHMP4A-204ENST00000530996 TOGARAM1Q9Y4F4 1720 aa21.84■■□□□ 1.09
CHMP4A-204ENST00000530996 TNNT2P45379 298 aaPredicted RBP21.84■■□□□ 1.09
CHMP4A-204ENST00000530996 PHF14O94880 888 aa21.83■■□□□ 1.09
CHMP4A-204ENST00000530996 ANKRD26Q9UPS8 1709 aa21.83■■□□□ 1.08
CHMP4A-204ENST00000530996 NCAPD2Q15021 1401 aa21.82■■□□□ 1.08
CHMP4A-204ENST00000530996 FLAD1Q8NFF5 587 aa21.82■■□□□ 1.08
CHMP4A-204ENST00000530996 COL24A1Q17RW2 1714 aa21.82■■□□□ 1.08
CHMP4A-204ENST00000530996 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
CHMP4A-204ENST00000530996 TMOD3Q9NYL9 352 aa21.81■■□□□ 1.08
CHMP4A-204ENST00000530996 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
CHMP4A-204ENST00000530996 PIGBQ92521 554 aa21.8■■□□□ 1.08
CHMP4A-204ENST00000530996 EYA1Q99502 592 aa21.8■■□□□ 1.08
CHMP4A-204ENST00000530996 C4BP0C0L5 1744 aa21.8■■□□□ 1.08
CHMP4A-204ENST00000530996 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
CHMP4A-204ENST00000530996 CHD4Q14839 1912 aa21.78■■□□□ 1.08
CHMP4A-204ENST00000530996 YBX3P16989 372 aaKnown RBP eCLIP21.76■■□□□ 1.07
CHMP4A-204ENST00000530996 EIF4A2Q14240 407 aaKnown RBP21.76■■□□□ 1.07
CHMP4A-204ENST00000530996 GOLGB1Q14789 3259 aaKnown RBP21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 LOC102724428A0A0B4J2F2 783 aa21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 GRIN3BO60391 1043 aa21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 SIK1P57059 783 aa21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 NKX1-1Q15270 411 aaPredicted RBP21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
CHMP4A-204ENST00000530996 ITGB4P16144 1822 aa21.74■■□□□ 1.07
CHMP4A-204ENST00000530996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.74■■□□□ 1.07
CHMP4A-204ENST00000530996 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
CHMP4A-204ENST00000530996 PHKG2P15735 406 aa21.74■■□□□ 1.07
CHMP4A-204ENST00000530996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.74■■□□□ 1.076e-7■■■■□ 20.8
CHMP4A-204ENST00000530996 TAF1LQ8IZX4 1826 aa21.73■■□□□ 1.07
CHMP4A-204ENST00000530996 GNPATO15228 680 aa21.73■■□□□ 1.07
CHMP4A-204ENST00000530996 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
CHMP4A-204ENST00000530996 SMIM5Q71RC9 77 aa21.73■■□□□ 1.07
CHMP4A-204ENST00000530996 LINC00116Q8NCU8 138 aa21.73■■□□□ 1.07
CHMP4A-204ENST00000530996 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
CHMP4A-204ENST00000530996 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
CHMP4A-204ENST00000530996 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
CHMP4A-204ENST00000530996 SSFA2P28290 1259 aa21.71■■□□□ 1.07
CHMP4A-204ENST00000530996 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
CHMP4A-204ENST00000530996 C1QTNF8P60827 252 aa21.71■■□□□ 1.07
CHMP4A-204ENST00000530996 PANK3Q9H999 370 aa21.7■■□□□ 1.06
CHMP4A-204ENST00000530996 WWC3Q9ULE0 1092 aa21.7■■□□□ 1.06
CHMP4A-204ENST00000530996 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.06
CHMP4A-204ENST00000530996 IGSF1Q8N6C5 1336 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms