RNA–Protein interactions for RNA: ENST00000530604.1

RSF1-208, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-208ENST00000530604 SHANK3Q9BYB0 1731 aa24.49■■□□□ 1.51
RSF1-208ENST00000530604 NBPF6Q5VWK0 638 aa24.49■■□□□ 1.51
RSF1-208ENST00000530604 NBPF4Q96M43 638 aa24.49■■□□□ 1.51
RSF1-208ENST00000530604 SYTL4Q96C24 671 aaPredicted RBP24.48■■□□□ 1.51
RSF1-208ENST00000530604 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
RSF1-208ENST00000530604 ARXQ96QS3 562 aa24.47■■□□□ 1.51
RSF1-208ENST00000530604 NSD2O96028 1365 aa24.46■■□□□ 1.51
RSF1-208ENST00000530604 CDCA8Q53HL2 280 aa24.46■■□□□ 1.51
RSF1-208ENST00000530604 QSER1Q2KHR3 1735 aa24.45■■□□□ 1.5
RSF1-208ENST00000530604 CGNL1Q0VF96 1302 aa24.44■■□□□ 1.5
RSF1-208ENST00000530604 KCNQ4P56696 695 aa24.44■■□□□ 1.5
RSF1-208ENST00000530604 USHBP1Q8N6Y0 703 aa24.44■■□□□ 1.5
RSF1-208ENST00000530604 LY75O60449 1722 aa24.44■■□□□ 1.5
RSF1-208ENST00000530604 KIF20BQ96Q89 1820 aa24.43■■□□□ 1.5
RSF1-208ENST00000530604 HSP90AB2PQ58FF8 381 aa24.43■■□□□ 1.5
RSF1-208ENST00000530604 SLC16A10Q8TF71 515 aa24.43■■□□□ 1.5
RSF1-208ENST00000530604 SMG6Q86US8 1419 aaKnown RBP24.43■■□□□ 1.5
RSF1-208ENST00000530604 INSRP06213 1382 aa24.42■■□□□ 1.5
RSF1-208ENST00000530604 PNPLA7Q6ZV29 1317 aa24.42■■□□□ 1.5
RSF1-208ENST00000530604 UTRNP46939 3433 aa24.42■■□□□ 1.5
RSF1-208ENST00000530604 RAPGEF4Q8WZA2 1011 aa24.42■■□□□ 1.5
RSF1-208ENST00000530604 CARD14Q9BXL6 1004 aa24.42■■□□□ 1.5
RSF1-208ENST00000530604 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
RSF1-208ENST00000530604 TFCP2L1Q9NZI6 479 aa24.4■■□□□ 1.5
RSF1-208ENST00000530604 KIF24Q5T7B8 1368 aa24.4■■□□□ 1.5
RSF1-208ENST00000530604 COL24A1Q17RW2 1714 aa24.39■■□□□ 1.5
RSF1-208ENST00000530604 TATP17735 454 aaPredicted RBP24.39■■□□□ 1.49
RSF1-208ENST00000530604 TUBGCP6Q96RT7 1819 aa24.39■■□□□ 1.49
RSF1-208ENST00000530604 FLT4P35916 1363 aa24.39■■□□□ 1.49
RSF1-208ENST00000530604 CCNL1Q9UK58 526 aaPredicted RBP24.37■■□□□ 1.49
RSF1-208ENST00000530604 TIMELESSQ9UNS1 1208 aa24.37■■□□□ 1.49
RSF1-208ENST00000530604 NSD3Q9BZ95 1437 aa24.35■■□□□ 1.49
RSF1-208ENST00000530604 POLD1P28340 1107 aa24.34■■□□□ 1.49
RSF1-208ENST00000530604 PCDH11XQ9BZA7 1347 aa24.34■■□□□ 1.49
RSF1-208ENST00000530604 PCDH11YQ9BZA8 1340 aa24.34■■□□□ 1.49
RSF1-208ENST00000530604 CHD4Q14839 1912 aa24.33■■□□□ 1.49
RSF1-208ENST00000530604 EMILIN1Q9Y6C2 1016 aa24.33■■□□□ 1.49
RSF1-208ENST00000530604 CYP27B1O15528 508 aa24.31■■□□□ 1.48
RSF1-208ENST00000530604 ZNF784Q8NCA9 323 aaPredicted RBP24.31■■□□□ 1.48
RSF1-208ENST00000530604 COL23A1Q86Y22 540 aaPredicted RBP24.29■■□□□ 1.48
RSF1-208ENST00000530604 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
RSF1-208ENST00000530604 KLHL34Q8N239 644 aa24.28■■□□□ 1.48
RSF1-208ENST00000530604 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
RSF1-208ENST00000530604 PPM1GO15355 546 aaPredicted RBP24.27■■□□□ 1.48
RSF1-208ENST00000530604 GPR162Q16538 588 aa24.27■■□□□ 1.48
RSF1-208ENST00000530604 MPRIPQ6WCQ1 1025 aa24.27■■□□□ 1.48
RSF1-208ENST00000530604 WASHC2AQ641Q2 1341 aa24.27■■□□□ 1.48
RSF1-208ENST00000530604 PKD1L3Q7Z443 1732 aa24.27■■□□□ 1.48
RSF1-208ENST00000530604 MAP2P11137 1827 aaKnown RBP24.26■■□□□ 1.47
RSF1-208ENST00000530604 C5P01031 1676 aa24.26■■□□□ 1.47
RSF1-208ENST00000530604 CLSPNQ9HAW4 1339 aa24.26■■□□□ 1.47
RSF1-208ENST00000530604 PALLDQ8WX93 1383 aa24.26■■□□□ 1.47
RSF1-208ENST00000530604 ITGB4P16144 1822 aa24.26■■□□□ 1.47
RSF1-208ENST00000530604 TOGARAM1Q9Y4F4 1720 aa24.25■■□□□ 1.47
RSF1-208ENST00000530604 MSH5O43196 834 aa24.25■■□□□ 1.47
RSF1-208ENST00000530604 TAF1LQ8IZX4 1826 aa24.25■■□□□ 1.47
RSF1-208ENST00000530604 HMGB2P26583 209 aaKnown RBP24.24■■□□□ 1.47
RSF1-208ENST00000530604 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
RSF1-208ENST00000530604 GOLGB1Q14789 3259 aaKnown RBP24.23■■□□□ 1.47
RSF1-208ENST00000530604 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
RSF1-208ENST00000530604 EYA1Q99502 592 aa24.23■■□□□ 1.47
RSF1-208ENST00000530604 SMARCC1Q92922 1105 aaPredicted RBP24.22■■□□□ 1.47
RSF1-208ENST00000530604 POLKQ9UBT6 870 aa24.22■■□□□ 1.47
RSF1-208ENST00000530604 SPG7Q9UQ90 795 aa24.22■■□□□ 1.47
RSF1-208ENST00000530604 PIGBQ92521 554 aa24.21■■□□□ 1.47
RSF1-208ENST00000530604 PCGF6Q9BYE7 350 aa24.21■■□□□ 1.47
RSF1-208ENST00000530604 FLAD1Q8NFF5 587 aa24.2■■□□□ 1.46
RSF1-208ENST00000530604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.2■■□□□ 1.46
RSF1-208ENST00000530604 MSL1Q68DK7 614 aa24.19■■□□□ 1.46
RSF1-208ENST00000530604 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
RSF1-208ENST00000530604 POLR3GLQ9BT43 218 aa24.17■■□□□ 1.46
RSF1-208ENST00000530604 C4BP0C0L5 1744 aa24.17■■□□□ 1.46
RSF1-208ENST00000530604 TNNT2P45379 298 aaPredicted RBP24.14■■□□□ 1.45
RSF1-208ENST00000530604 EIF4A2Q14240 407 aaKnown RBP24.14■■□□□ 1.45
RSF1-208ENST00000530604 AMIGO3Q86WK7 504 aa24.14■■□□□ 1.45
RSF1-208ENST00000530604 AK7Q96M32 723 aa24.14■■□□□ 1.45
RSF1-208ENST00000530604 PHKG2P15735 406 aa24.13■■□□□ 1.45
RSF1-208ENST00000530604 YBX3P16989 372 aaKnown RBP eCLIP24.13■■□□□ 1.45
RSF1-208ENST00000530604 IFNL2Q8IZJ0 200 aa24.13■■□□□ 1.45
RSF1-208ENST00000530604 UBR3Q6ZT12 1888 aa24.13■■□□□ 1.45
RSF1-208ENST00000530604 LOC102724428A0A0B4J2F2 783 aa24.12■■□□□ 1.45
RSF1-208ENST00000530604 SIK1P57059 783 aa24.12■■□□□ 1.45
RSF1-208ENST00000530604 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
RSF1-208ENST00000530604 TMOD3Q9NYL9 352 aa24.12■■□□□ 1.45
RSF1-208ENST00000530604 CD2APQ9Y5K6 639 aa24.12■■□□□ 1.45
RSF1-208ENST00000530604 GRIN3BO60391 1043 aa24.11■■□□□ 1.45
RSF1-208ENST00000530604 HSPA5P11021 654 aaKnown RBP24.11■■□□□ 1.45
RSF1-208ENST00000530604 ASAP1Q9ULH1 1129 aa24.11■■□□□ 1.45
RSF1-208ENST00000530604 SMIM5Q71RC9 77 aa24.1■■□□□ 1.45
RSF1-208ENST00000530604 LINC00116Q8NCU8 138 aa24.1■■□□□ 1.45
RSF1-208ENST00000530604 PANK3Q9H999 370 aa24.1■■□□□ 1.45
RSF1-208ENST00000530604 PLEKHG2Q9H7P9 1386 aa24.09■■□□□ 1.45
RSF1-208ENST00000530604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.09■■□□□ 1.45
RSF1-208ENST00000530604 PHF14O94880 888 aa24.08■■□□□ 1.45
RSF1-208ENST00000530604 SSFA2P28290 1259 aa24.08■■□□□ 1.45
RSF1-208ENST00000530604 IGSF1Q8N6C5 1336 aa24.08■■□□□ 1.44
RSF1-208ENST00000530604 C1QTNF8P60827 252 aa24.07■■□□□ 1.44
RSF1-208ENST00000530604 ITPK1Q13572 414 aa24.07■■□□□ 1.44
RSF1-208ENST00000530604 ATG3Q9NT62 314 aa24.07■■□□□ 1.44
RSF1-208ENST00000530604 ATP6V1AP38606 617 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 1255 ms