RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DLG5Q8TDM6 1919 aa14.52□□□□□ -0.08
USP35-207ENST00000530546 ESCO1Q5FWF5 840 aa14.52□□□□□ -0.09
USP35-207ENST00000530546 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
USP35-207ENST00000530546 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
USP35-207ENST00000530546 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
USP35-207ENST00000530546 ANKARQ7Z5J8 1434 aa14.51□□□□□ -0.09
USP35-207ENST00000530546 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
USP35-207ENST00000530546 HOXC9P31274 260 aa14.5□□□□□ -0.09
USP35-207ENST00000530546 BRPF1P55201 1214 aaPredicted RBP14.5□□□□□ -0.09
USP35-207ENST00000530546 CHL1O00533 1208 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
USP35-207ENST00000530546 PSME1Q06323 249 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 USHBP1Q8N6Y0 703 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 ZBTB7BO15156 539 aaPredicted RBP14.49□□□□□ -0.09
USP35-207ENST00000530546 CLCN1P35523 988 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 NALCNQ8IZF0 1738 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 ARHGAP45Q92619 1136 aa14.49□□□□□ -0.09
USP35-207ENST00000530546 VIRMAQ69YN4 1812 aaKnown RBP14.49□□□□□ -0.09
USP35-207ENST00000530546 PIK3C2AO00443 1686 aa14.48□□□□□ -0.09
USP35-207ENST00000530546 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
USP35-207ENST00000530546 API5Q9BZZ5 524 aaKnown RBP14.48□□□□□ -0.09
USP35-207ENST00000530546 LNPKQ9C0E8 428 aa14.48□□□□□ -0.09
USP35-207ENST00000530546 TSPYL4Q9UJ04 414 aa14.48□□□□□ -0.09
USP35-207ENST00000530546 NAP1L5Q96NT1 182 aaPredicted RBP14.47□□□□□ -0.09
USP35-207ENST00000530546 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
USP35-207ENST00000530546 SMC5Q8IY18 1101 aa14.47□□□□□ -0.09
USP35-207ENST00000530546 ABCC4O15439 1325 aa14.46□□□□□ -0.09
USP35-207ENST00000530546 USP19O94966 1318 aa14.46□□□□□ -0.09
USP35-207ENST00000530546 GAS2L2Q8NHY3 880 aa14.46□□□□□ -0.1
USP35-207ENST00000530546 ORAI2Q96SN7 254 aa14.46□□□□□ -0.1
USP35-207ENST00000530546 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
USP35-207ENST00000530546 CRB1P82279 1406 aa14.44□□□□□ -0.1
USP35-207ENST00000530546 ANKRD45Q5TZF3 282 aa14.44□□□□□ -0.1
USP35-207ENST00000530546 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
USP35-207ENST00000530546 RGPD1P0DJD0 1748 aa14.44□□□□□ -0.1
USP35-207ENST00000530546 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
USP35-207ENST00000530546 NECTIN2Q92692 538 aa14.43□□□□□ -0.1
USP35-207ENST00000530546 CHMP4BQ9H444 224 aaKnown RBP14.43□□□□□ -0.1
USP35-207ENST00000530546 KDRP35968 1356 aa14.43□□□□□ -0.1
USP35-207ENST00000530546 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
USP35-207ENST00000530546 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
USP35-207ENST00000530546 NUCB1Q02818 461 aa14.42□□□□□ -0.1
USP35-207ENST00000530546 CHD1LQ86WJ1 897 aa14.42□□□□□ -0.1
USP35-207ENST00000530546 PROSER2Q86WR7 435 aaPredicted RBP14.42□□□□□ -0.1
USP35-207ENST00000530546 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
USP35-207ENST00000530546 GNAT3A8MTJ3 354 aa14.42□□□□□ -0.1
USP35-207ENST00000530546 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
USP35-207ENST00000530546 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
USP35-207ENST00000530546 BECN1Q14457 450 aa14.41□□□□□ -0.1
USP35-207ENST00000530546 MFAP1P55081 439 aaKnown RBP14.41□□□□□ -0.1
USP35-207ENST00000530546 SLC4A10Q6U841 1118 aa14.41□□□□□ -0.1
USP35-207ENST00000530546 G2E3Q7L622 706 aa14.41□□□□□ -0.1
USP35-207ENST00000530546 KIAA0232Q92628 1395 aa14.41□□□□□ -0.1
USP35-207ENST00000530546 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
USP35-207ENST00000530546 F6X3S4 739 aa14.4□□□□□ -0.1
USP35-207ENST00000530546 IL17REQ8NFR9 667 aa14.4□□□□□ -0.1
USP35-207ENST00000530546 LRRC59Q96AG4 307 aaKnown RBP14.4□□□□□ -0.1
USP35-207ENST00000530546 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
USP35-207ENST00000530546 IP6K1Q92551 441 aa14.39□□□□□ -0.11
USP35-207ENST00000530546 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
USP35-207ENST00000530546 FSD2A1L4K1 749 aa14.39□□□□□ -0.11
USP35-207ENST00000530546 GOLGA6L3A6NEY3 463 aa14.39□□□□□ -0.11
USP35-207ENST00000530546 GCC1Q96CN9 775 aa14.38□□□□□ -0.11
USP35-207ENST00000530546 SETD1BQ9UPS6 1966 aaKnown RBP14.38□□□□□ -0.11
USP35-207ENST00000530546 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
USP35-207ENST00000530546 ZNF142P52746 1687 aaPredicted RBP14.38□□□□□ -0.11
USP35-207ENST00000530546 APBB1O00213 710 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 KIF24Q5T7B8 1368 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 XRCC6P12956 609 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP35-207ENST00000530546 MEIS3Q99687 375 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 MAP3K5Q99683 1374 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 KCNH5Q8NCM2 988 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 TBC1D32Q96NH3 1257 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
USP35-207ENST00000530546 MSH6P52701 1360 aa14.36□□□□□ -0.11
USP35-207ENST00000530546 PTPRCP08575 1304 aa14.36□□□□□ -0.11
USP35-207ENST00000530546 MARF1Q9Y4F3 1742 aaKnown RBP14.36□□□□□ -0.11
USP35-207ENST00000530546 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
USP35-207ENST00000530546 GCP02774 474 aa14.36□□□□□ -0.11
USP35-207ENST00000530546 RGS12O14924 1447 aa14.36□□□□□ -0.11
USP35-207ENST00000530546 KRT28Q7Z3Y7 464 aa14.35□□□□□ -0.11
USP35-207ENST00000530546 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
USP35-207ENST00000530546 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
USP35-207ENST00000530546 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
USP35-207ENST00000530546 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
USP35-207ENST00000530546 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
USP35-207ENST00000530546 FKBP5Q13451 457 aaPredicted RBP14.34□□□□□ -0.11
USP35-207ENST00000530546 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
USP35-207ENST00000530546 ANTXR1Q9H6X2 564 aa14.34□□□□□ -0.11
USP35-207ENST00000530546 TPM2P07951 284 aa14.33□□□□□ -0.12
USP35-207ENST00000530546 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
USP35-207ENST00000530546 ZC3H6P61129 1189 aaKnown RBP14.32□□□□□ -0.12
USP35-207ENST00000530546 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
USP35-207ENST00000530546 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
USP35-207ENST00000530546 ANKRD44Q8N8A2 993 aa14.32□□□□□ -0.12
USP35-207ENST00000530546 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
USP35-207ENST00000530546 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
USP35-207ENST00000530546 FLIIQ13045 1269 aa14.32□□□□□ -0.12
USP35-207ENST00000530546 C16orf71Q8IYS4 520 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms