RNA–Protein interactions for RNA: ENST00000530413.1

CFL1-209, Transcript of cofilin 1, humanhuman

TSL 1 (best)

Gene CFL1, Length 647 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-209ENST00000530413 NBPF4Q96M43 638 aa21.31■■□□□ 1
CFL1-209ENST00000530413 GGNBP2Q9H3C7 697 aa21.31■■□□□ 1
CFL1-209ENST00000530413 NSD2O96028 1365 aa21.3■■□□□ 1
CFL1-209ENST00000530413 MEGF6O75095 1541 aa21.29■■□□□ 1
CFL1-209ENST00000530413 RTL1A6NKG5 1358 aa21.29■■□□□ 1
CFL1-209ENST00000530413 POLD1P28340 1107 aa21.29■■□□□ 1
CFL1-209ENST00000530413 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
CFL1-209ENST00000530413 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
CFL1-209ENST00000530413 KLHL34Q8N239 644 aa21.28■■□□□ 1
CFL1-209ENST00000530413 TMF1P82094 1093 aa21.27■■□□□ 1
CFL1-209ENST00000530413 GPR162Q16538 588 aa21.27■■□□□ 1
CFL1-209ENST00000530413 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
CFL1-209ENST00000530413 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
CFL1-209ENST00000530413 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
CFL1-209ENST00000530413 USP47Q96K76 1375 aa21.23■□□□□ 0.99
CFL1-209ENST00000530413 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
CFL1-209ENST00000530413 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
CFL1-209ENST00000530413 TATP17735 454 aaPredicted RBP21.22■□□□□ 0.99
CFL1-209ENST00000530413 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
CFL1-209ENST00000530413 INSRP06213 1382 aa21.22■□□□□ 0.99
CFL1-209ENST00000530413 MSH5O43196 834 aa21.21■□□□□ 0.99
CFL1-209ENST00000530413 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
CFL1-209ENST00000530413 NLGN2Q8NFZ4 835 aa21.21■□□□□ 0.99
CFL1-209ENST00000530413 DOT1LQ8TEK3 1739 aa21.21■□□□□ 0.99
CFL1-209ENST00000530413 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
CFL1-209ENST00000530413 FLT4P35916 1363 aa21.19■□□□□ 0.98
CFL1-209ENST00000530413 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
CFL1-209ENST00000530413 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
CFL1-209ENST00000530413 SHANK3Q9BYB0 1731 aa21.18■□□□□ 0.98
CFL1-209ENST00000530413 UTRNP46939 3433 aa21.17■□□□□ 0.98
CFL1-209ENST00000530413 CARD14Q9BXL6 1004 aa21.17■□□□□ 0.98
CFL1-209ENST00000530413 KIF24Q5T7B8 1368 aa21.17■□□□□ 0.98
CFL1-209ENST00000530413 QSER1Q2KHR3 1735 aa21.17■□□□□ 0.98
CFL1-209ENST00000530413 CYP27B1O15528 508 aa21.16■□□□□ 0.98
CFL1-209ENST00000530413 RGPD2P0DJD1 1756 aa21.15■□□□□ 0.98
CFL1-209ENST00000530413 LY75O60449 1722 aa21.15■□□□□ 0.98
CFL1-209ENST00000530413 C1QTNF8P60827 252 aa21.15■□□□□ 0.98
CFL1-209ENST00000530413 MSL1Q68DK7 614 aa21.15■□□□□ 0.98
CFL1-209ENST00000530413 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
CFL1-209ENST00000530413 EMILIN1Q9Y6C2 1016 aa21.15■□□□□ 0.98
CFL1-209ENST00000530413 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
CFL1-209ENST00000530413 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
CFL1-209ENST00000530413 YBX3P16989 372 aaKnown RBP eCLIP21.13■□□□□ 0.972e-9■□□□□ 10.3
CFL1-209ENST00000530413 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
CFL1-209ENST00000530413 FLAD1Q8NFF5 587 aa21.12■□□□□ 0.97
CFL1-209ENST00000530413 KAT6BQ8WYB5 2073 aa21.12■□□□□ 0.97
CFL1-209ENST00000530413 SENP3-EIF4A1A0A087X0R7 540 aa21.11■□□□□ 0.97
CFL1-209ENST00000530413 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
CFL1-209ENST00000530413 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
CFL1-209ENST00000530413 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
CFL1-209ENST00000530413 GRIN3BO60391 1043 aa21.1■□□□□ 0.97
CFL1-209ENST00000530413 SMARCC1Q92922 1105 aaPredicted RBP21.1■□□□□ 0.97
CFL1-209ENST00000530413 TRIM26Q12899 539 aaPredicted RBP21.09■□□□□ 0.97
CFL1-209ENST00000530413 PIGBQ92521 554 aa21.08■□□□□ 0.97
CFL1-209ENST00000530413 GIGYF1O75420 1035 aaPredicted RBP21.07■□□□□ 0.96
CFL1-209ENST00000530413 NKX1-1Q15270 411 aaPredicted RBP21.07■□□□□ 0.96
CFL1-209ENST00000530413 AK7Q96M32 723 aa21.07■□□□□ 0.96
CFL1-209ENST00000530413 SPG7Q9UQ90 795 aa21.07■□□□□ 0.96
CFL1-209ENST00000530413 CD2APQ9Y5K6 639 aa21.07■□□□□ 0.96
CFL1-209ENST00000530413 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
CFL1-209ENST00000530413 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
CFL1-209ENST00000530413 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
CFL1-209ENST00000530413 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
CFL1-209ENST00000530413 EYA1Q99502 592 aa21.05■□□□□ 0.96
CFL1-209ENST00000530413 CHD4Q14839 1912 aa21.04■□□□□ 0.96
CFL1-209ENST00000530413 PHF14O94880 888 aa21.04■□□□□ 0.96
CFL1-209ENST00000530413 C5P01031 1676 aa21.03■□□□□ 0.96
CFL1-209ENST00000530413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.96
CFL1-209ENST00000530413 POLKQ9UBT6 870 aa21.03■□□□□ 0.96
CFL1-209ENST00000530413 KIF20BQ96Q89 1820 aa21.03■□□□□ 0.96
CFL1-209ENST00000530413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
CFL1-209ENST00000530413 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
CFL1-209ENST00000530413 SIK1P57059 783 aa21.01■□□□□ 0.95
CFL1-209ENST00000530413 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
CFL1-209ENST00000530413 TMOD3Q9NYL9 352 aa21.01■□□□□ 0.95
CFL1-209ENST00000530413 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
CFL1-209ENST00000530413 ASAP1Q9ULH1 1129 aa21■□□□□ 0.95
CFL1-209ENST00000530413 TOGARAM1Q9Y4F4 1720 aa21■□□□□ 0.95
CFL1-209ENST00000530413 GOLGB1Q14789 3259 aaKnown RBP20.99■□□□□ 0.95
CFL1-209ENST00000530413 PHKG2P15735 406 aa20.99■□□□□ 0.95
CFL1-209ENST00000530413 SSFA2P28290 1259 aa20.99■□□□□ 0.95
CFL1-209ENST00000530413 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
CFL1-209ENST00000530413 C4BP0C0L5 1744 aa20.98■□□□□ 0.95
CFL1-209ENST00000530413 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
CFL1-209ENST00000530413 ITPK1Q13572 414 aa20.98■□□□□ 0.95
CFL1-209ENST00000530413 TNNT2P45379 298 aaPredicted RBP20.97■□□□□ 0.95
CFL1-209ENST00000530413 EIF4A2Q14240 407 aaKnown RBP20.97■□□□□ 0.95
CFL1-209ENST00000530413 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
CFL1-209ENST00000530413 ATP10DQ9P241 1426 aa20.96■□□□□ 0.95
CFL1-209ENST00000530413 GNPATO15228 680 aa20.96■□□□□ 0.95
CFL1-209ENST00000530413 ATP6V1AP38606 617 aa20.96■□□□□ 0.95
CFL1-209ENST00000530413 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
CFL1-209ENST00000530413 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
CFL1-209ENST00000530413 WWC3Q9ULE0 1092 aa20.94■□□□□ 0.94
CFL1-209ENST00000530413 ANKRD26Q9UPS8 1709 aa20.93■□□□□ 0.94
CFL1-209ENST00000530413 TAF1LQ8IZX4 1826 aa20.92■□□□□ 0.94
CFL1-209ENST00000530413 GPBP1L1Q9HC44 474 aaPredicted RBP20.92■□□□□ 0.94
CFL1-209ENST00000530413 ITGB4P16144 1822 aa20.9■□□□□ 0.94
CFL1-209ENST00000530413 ADCY9O60503 1353 aa20.89■□□□□ 0.93
CFL1-209ENST00000530413 PLEKHG2Q9H7P9 1386 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms