RNA–Protein interactions for RNA: ENST00000529693.1

PUF60-214, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 684 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-214ENST00000529693 TATP17735 454 aaPredicted RBP23.34■■□□□ 1.33
PUF60-214ENST00000529693 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
PUF60-214ENST00000529693 TNS2Q63HR2 1409 aa23.33■■□□□ 1.33
PUF60-214ENST00000529693 DDB1Q16531 1140 aa23.33■■□□□ 1.33
PUF60-214ENST00000529693 EXOC5O00471 708 aa23.32■■□□□ 1.32
PUF60-214ENST00000529693 MIER1Q8N108 512 aa23.31■■□□□ 1.32
PUF60-214ENST00000529693 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
PUF60-214ENST00000529693 ZCRB1Q8TBF4 217 aaKnown RBP23.3■■□□□ 1.32
PUF60-214ENST00000529693 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
PUF60-214ENST00000529693 FAM182BQ5T319 152 aa23.29■■□□□ 1.32
PUF60-214ENST00000529693 KRT27Q7Z3Y8 459 aa23.29■■□□□ 1.32
PUF60-214ENST00000529693 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
PUF60-214ENST00000529693 PDE3BQ13370 1112 aa23.28■■□□□ 1.32
PUF60-214ENST00000529693 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
PUF60-214ENST00000529693 KAT6BQ8WYB5 2073 aa23.27■■□□□ 1.32
PUF60-214ENST00000529693 SBF2Q86WG5 1849 aa23.26■■□□□ 1.31
PUF60-214ENST00000529693 FCHSD2O94868 740 aa23.26■■□□□ 1.31
PUF60-214ENST00000529693 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
PUF60-214ENST00000529693 PLEKHG2Q9H7P9 1386 aa23.26■■□□□ 1.31
PUF60-214ENST00000529693 VIRMAQ69YN4 1812 aaKnown RBP23.25■■□□□ 1.31
PUF60-214ENST00000529693 PNISRQ8TF01 805 aaKnown RBP23.25■■□□□ 1.31
PUF60-214ENST00000529693 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
PUF60-214ENST00000529693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
PUF60-214ENST00000529693 ADAMTS8Q9UP79 889 aa23.25■■□□□ 1.31
PUF60-214ENST00000529693 CYP27B1O15528 508 aa23.24■■□□□ 1.31
PUF60-214ENST00000529693 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
PUF60-214ENST00000529693 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
PUF60-214ENST00000529693 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
PUF60-214ENST00000529693 DLG5Q8TDM6 1919 aa23.23■■□□□ 1.31
PUF60-214ENST00000529693 PLEKHF1Q96S99 279 aa23.23■■□□□ 1.31
PUF60-214ENST00000529693 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
PUF60-214ENST00000529693 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
PUF60-214ENST00000529693 PCDH11XQ9BZA7 1347 aa23.22■■□□□ 1.31
PUF60-214ENST00000529693 PCDH11YQ9BZA8 1340 aa23.22■■□□□ 1.31
PUF60-214ENST00000529693 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
PUF60-214ENST00000529693 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.3
PUF60-214ENST00000529693 TOGARAM1Q9Y4F4 1720 aa23.2■■□□□ 1.3
PUF60-214ENST00000529693 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
PUF60-214ENST00000529693 PHKG2P15735 406 aa23.19■■□□□ 1.3
PUF60-214ENST00000529693 ITGB4P16144 1822 aa23.18■■□□□ 1.3
PUF60-214ENST00000529693 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
PUF60-214ENST00000529693 SCN11AQ9UI33 1791 aa23.17■■□□□ 1.3
PUF60-214ENST00000529693 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
PUF60-214ENST00000529693 BCL9O00512 1426 aa23.16■■□□□ 1.3
PUF60-214ENST00000529693 FAM196AQ6ZSG2 479 aa23.16■■□□□ 1.3
PUF60-214ENST00000529693 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
PUF60-214ENST00000529693 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
PUF60-214ENST00000529693 ADAMTS7Q9UKP4 1686 aa23.14■■□□□ 1.29
PUF60-214ENST00000529693 PNNQ9H307 717 aaKnown RBP23.14■■□□□ 1.29
PUF60-214ENST00000529693 EP400Q96L91 3159 aa23.14■■□□□ 1.29
PUF60-214ENST00000529693 PTF1AQ7RTS3 328 aa23.13■■□□□ 1.29
PUF60-214ENST00000529693 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
PUF60-214ENST00000529693 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
PUF60-214ENST00000529693 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
PUF60-214ENST00000529693 KDM6AO15550 1401 aaPredicted RBP23.13■■□□□ 1.29
PUF60-214ENST00000529693 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
PUF60-214ENST00000529693 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
PUF60-214ENST00000529693 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
PUF60-214ENST00000529693 ACSBG1Q96GR2 724 aa23.12■■□□□ 1.29
PUF60-214ENST00000529693 MAPK8IP3Q9UPT6 1336 aa23.11■■□□□ 1.29
PUF60-214ENST00000529693 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
PUF60-214ENST00000529693 BTAF1O14981 1849 aa23.1■■□□□ 1.29
PUF60-214ENST00000529693 KCNQ2O43526 872 aa23.1■■□□□ 1.29
PUF60-214ENST00000529693 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
PUF60-214ENST00000529693 MAP3K5Q99683 1374 aa23.1■■□□□ 1.29
PUF60-214ENST00000529693 TRIM37O94972 964 aa23.09■■□□□ 1.29
PUF60-214ENST00000529693 NEFMP07197 916 aa23.09■■□□□ 1.29
PUF60-214ENST00000529693 LGR6Q9HBX8 967 aa23.09■■□□□ 1.29
PUF60-214ENST00000529693 GNAT3A8MTJ3 354 aa23.08■■□□□ 1.29
PUF60-214ENST00000529693 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.29
PUF60-214ENST00000529693 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
PUF60-214ENST00000529693 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
PUF60-214ENST00000529693 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
PUF60-214ENST00000529693 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
PUF60-214ENST00000529693 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
PUF60-214ENST00000529693 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
PUF60-214ENST00000529693 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
PUF60-214ENST00000529693 APAF1O14727 1248 aa23.05■■□□□ 1.28
PUF60-214ENST00000529693 UPF1Q92900 1129 aaKnown RBP eCLIP23.05■■□□□ 1.28
PUF60-214ENST00000529693 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
PUF60-214ENST00000529693 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
PUF60-214ENST00000529693 RIPK4P57078 832 aa23.03■■□□□ 1.28
PUF60-214ENST00000529693 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
PUF60-214ENST00000529693 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
PUF60-214ENST00000529693 SYTL4Q96C24 671 aaPredicted RBP23.03■■□□□ 1.28
PUF60-214ENST00000529693 MRC1P22897 1456 aa23.03■■□□□ 1.28
PUF60-214ENST00000529693 ERVV-2B6SEH9 535 aa23.02■■□□□ 1.28
PUF60-214ENST00000529693 MCM10Q7L590 875 aa23.02■■□□□ 1.28
PUF60-214ENST00000529693 CEMIPQ8WUJ3 1361 aa23.01■■□□□ 1.27
PUF60-214ENST00000529693 HTATSF1O43719 755 aaKnown RBP23.01■■□□□ 1.27
PUF60-214ENST00000529693 PIGBQ92521 554 aa23.01■■□□□ 1.27
PUF60-214ENST00000529693 TRIM35Q9UPQ4 493 aa23■■□□□ 1.27
PUF60-214ENST00000529693 NFATC2IPQ8NCF5 419 aa22.99■■□□□ 1.27
PUF60-214ENST00000529693 RTF1Q92541 710 aaKnown RBP22.99■■□□□ 1.27
PUF60-214ENST00000529693 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
PUF60-214ENST00000529693 CABP4P57796 275 aa22.98■■□□□ 1.27
PUF60-214ENST00000529693 SLC52A2Q9HAB3 445 aa22.98■■□□□ 1.27
PUF60-214ENST00000529693 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
PUF60-214ENST00000529693 LY75O60449 1722 aa22.97■■□□□ 1.27
PUF60-214ENST00000529693 APBA3O96018 575 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms