RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 NUTM2BA6NNL0 878 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-218ENST00000528877 NUTM2EB1AL46 878 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-218ENST00000528877 NUTM2AQ8IVF1 878 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-218ENST00000528877 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
ITGB1-218ENST00000528877 EPAS1Q99814 870 aa10.21□□□□□ -0.77
ITGB1-218ENST00000528877 PRR36Q9H6K5 1346 aa10.21□□□□□ -0.78
ITGB1-218ENST00000528877 ATRNO75882 1429 aa10.21□□□□□ -0.78
ITGB1-218ENST00000528877 QRICH2Q9H0J4 1663 aa10.21□□□□□ -0.78
ITGB1-218ENST00000528877 WASLO00401 505 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-218ENST00000528877 SLIT2O94813 1529 aa10.2□□□□□ -0.78
ITGB1-218ENST00000528877 SAFB2Q14151 953 aaKnown RBP eCLIP10.2□□□□□ -0.78
ITGB1-218ENST00000528877 GPRASP1Q5JY77 1395 aa10.2□□□□□ -0.78
ITGB1-218ENST00000528877 TYW1BQ6NUM6 668 aa10.2□□□□□ -0.78
ITGB1-218ENST00000528877 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-218ENST00000528877 NWD2Q9ULI1 1742 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 BCL9LQ86UU0 1499 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 RGS12O14924 1447 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
ITGB1-218ENST00000528877 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 PTPREP23469 700 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 C8orf37Q96NL8 207 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 EP400Q96L91 3159 aa10.19□□□□□ -0.78
ITGB1-218ENST00000528877 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-218ENST00000528877 XPCQ01831 940 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-218ENST00000528877 PSME1Q06323 249 aa10.18□□□□□ -0.78
ITGB1-218ENST00000528877 KRT28Q7Z3Y7 464 aa10.18□□□□□ -0.78
ITGB1-218ENST00000528877 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
ITGB1-218ENST00000528877 HIRIP3Q9BW71 556 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-218ENST00000528877 PLCH1Q4KWH8 1693 aa10.18□□□□□ -0.78
ITGB1-218ENST00000528877 TK2O00142 265 aa10.17□□□□□ -0.78
ITGB1-218ENST00000528877 RXRBP28702 533 aa10.17□□□□□ -0.78
ITGB1-218ENST00000528877 NBPF1Q3BBV0 1214 aa10.17□□□□□ -0.78
ITGB1-218ENST00000528877 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
ITGB1-218ENST00000528877 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
ITGB1-218ENST00000528877 SBNO2Q9Y2G9 1366 aa10.16□□□□□ -0.78
ITGB1-218ENST00000528877 CENPJQ9HC77 1338 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-218ENST00000528877 ADAMTS2O95450 1211 aa10.16□□□□□ -0.78
ITGB1-218ENST00000528877 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
ITGB1-218ENST00000528877 TRIM26Q12899 539 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-218ENST00000528877 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
ITGB1-218ENST00000528877 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
ITGB1-218ENST00000528877 NRAPQ86VF7 1730 aa10.16□□□□□ -0.78
ITGB1-218ENST00000528877 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.78
ITGB1-218ENST00000528877 POTEEQ6S8J3 1075 aa10.15□□□□□ -0.78
ITGB1-218ENST00000528877 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
ITGB1-218ENST00000528877 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
ITGB1-218ENST00000528877 ROCK2O75116 1388 aaKnown RBP10.14□□□□□ -0.79
ITGB1-218ENST00000528877 COL14A1Q05707 1796 aaKnown RBP10.14□□□□□ -0.79
ITGB1-218ENST00000528877 VSIG10Q8N0Z9 540 aa10.14□□□□□ -0.79
ITGB1-218ENST00000528877 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
ITGB1-218ENST00000528877 NUDT16Q96DE0 195 aaKnown RBP10.14□□□□□ -0.79
ITGB1-218ENST00000528877 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
ITGB1-218ENST00000528877 USP21Q9UK80 565 aa10.14□□□□□ -0.79
ITGB1-218ENST00000528877 TRPC5Q9UL62 973 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-218ENST00000528877 GLI3P10071 1580 aa10.14□□□□□ -0.79
ITGB1-218ENST00000528877 BRD4O60885 1362 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-218ENST00000528877 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
ITGB1-218ENST00000528877 PMFBP1Q8TBY8 1022 aa10.13□□□□□ -0.79
ITGB1-218ENST00000528877 CDK19Q9BWU1 502 aa10.13□□□□□ -0.79
ITGB1-218ENST00000528877 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
ITGB1-218ENST00000528877 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
ITGB1-218ENST00000528877 NRKQ7Z2Y5 1582 aa10.13□□□□□ -0.79
ITGB1-218ENST00000528877 PSEN2P49810 448 aa10.12□□□□□ -0.79
ITGB1-218ENST00000528877 DDX12PQ92771 950 aa10.12□□□□□ -0.79
ITGB1-218ENST00000528877 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
ITGB1-218ENST00000528877 PPIP5K1Q6PFW1 1433 aa10.12□□□□□ -0.79
ITGB1-218ENST00000528877 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
ITGB1-218ENST00000528877 UNC5CLQ8IV45 518 aa10.11□□□□□ -0.79
ITGB1-218ENST00000528877 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
ITGB1-218ENST00000528877 TONSLQ96HA7 1378 aa10.11□□□□□ -0.79
ITGB1-218ENST00000528877 USP19O94966 1318 aa10.1□□□□□ -0.79
ITGB1-218ENST00000528877 USP6P35125 1406 aa10.1□□□□□ -0.79
ITGB1-218ENST00000528877 SSH2Q76I76 1423 aa10.1□□□□□ -0.79
ITGB1-218ENST00000528877 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
ITGB1-218ENST00000528877 NBR1Q14596 966 aa10.1□□□□□ -0.79
ITGB1-218ENST00000528877 NGDNQ8NEJ9 315 aaKnown RBP10.1□□□□□ -0.79
ITGB1-218ENST00000528877 ACEP12821 1306 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 SLIT3O75094 1523 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 CPDO75976 1380 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 ATAD2Q6PL18 1390 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 PIK3C2AO00443 1686 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 USP54Q70EL1 1684 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 LMO7Q8WWI1 1683 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 AKAP12Q02952 1782 aa10.09□□□□□ -0.79
ITGB1-218ENST00000528877 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
ITGB1-218ENST00000528877 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-218ENST00000528877 VPS72Q15906 364 aa10.08□□□□□ -0.8
ITGB1-218ENST00000528877 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
ITGB1-218ENST00000528877 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
ITGB1-218ENST00000528877 GJD4Q96KN9 370 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-218ENST00000528877 THSD7AQ9UPZ6 1657 aa10.08□□□□□ -0.8
ITGB1-218ENST00000528877 MON2Q7Z3U7 1717 aa10.07□□□□□ -0.8
ITGB1-218ENST00000528877 SRPK2P78362 688 aaKnown RBP10.07□□□□□ -0.8
ITGB1-218ENST00000528877 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
ITGB1-218ENST00000528877 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
ITGB1-218ENST00000528877 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
ITGB1-218ENST00000528877 MAP3K7O43318 606 aa10.06□□□□□ -0.8
ITGB1-218ENST00000528877 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms