RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
RPS3-210ENST00000528439 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
RPS3-210ENST00000528439 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
RPS3-210ENST00000528439 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
RPS3-210ENST00000528439 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
RPS3-210ENST00000528439 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
RPS3-210ENST00000528439 CRB1P82279 1406 aa13.13□□□□□ -0.31
RPS3-210ENST00000528439 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
RPS3-210ENST00000528439 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
RPS3-210ENST00000528439 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 MCM10Q7L590 875 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
RPS3-210ENST00000528439 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
RPS3-210ENST00000528439 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
RPS3-210ENST00000528439 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
RPS3-210ENST00000528439 SLIT2O94813 1529 aa13.11□□□□□ -0.31
RPS3-210ENST00000528439 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
RPS3-210ENST00000528439 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
RPS3-210ENST00000528439 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
RPS3-210ENST00000528439 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
RPS3-210ENST00000528439 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
RPS3-210ENST00000528439 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
RPS3-210ENST00000528439 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
RPS3-210ENST00000528439 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
RPS3-210ENST00000528439 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
RPS3-210ENST00000528439 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
RPS3-210ENST00000528439 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
RPS3-210ENST00000528439 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
RPS3-210ENST00000528439 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
RPS3-210ENST00000528439 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
RPS3-210ENST00000528439 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
RPS3-210ENST00000528439 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
RPS3-210ENST00000528439 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
RPS3-210ENST00000528439 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
RPS3-210ENST00000528439 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
RPS3-210ENST00000528439 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
RPS3-210ENST00000528439 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
RPS3-210ENST00000528439 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
RPS3-210ENST00000528439 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
RPS3-210ENST00000528439 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
RPS3-210ENST00000528439 EVA1CP58658 441 aa13.06□□□□□ -0.32
RPS3-210ENST00000528439 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
RPS3-210ENST00000528439 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
RPS3-210ENST00000528439 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
RPS3-210ENST00000528439 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
RPS3-210ENST00000528439 MRC1P22897 1456 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 GNAI1P63096 354 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
RPS3-210ENST00000528439 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
RPS3-210ENST00000528439 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
RPS3-210ENST00000528439 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 CHL1O00533 1208 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 CYP27B1O15528 508 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 IL2RBP14784 551 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 PHKG2P15735 406 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
RPS3-210ENST00000528439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPS3-210ENST00000528439 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
RPS3-210ENST00000528439 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
RPS3-210ENST00000528439 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
RPS3-210ENST00000528439 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
RPS3-210ENST00000528439 NGLY1Q96IV0 654 aa13.03□□□□□ -0.32
RPS3-210ENST00000528439 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
RPS3-210ENST00000528439 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
RPS3-210ENST00000528439 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
RPS3-210ENST00000528439 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
RPS3-210ENST00000528439 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
RPS3-210ENST00000528439 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
RPS3-210ENST00000528439 BCAR3O75815 825 aa13.01□□□□□ -0.33
RPS3-210ENST00000528439 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
RPS3-210ENST00000528439 FKBP8Q14318 412 aa13.01□□□□□ -0.33
RPS3-210ENST00000528439 AFF2P51816 1311 aa13.01□□□□□ -0.33
RPS3-210ENST00000528439 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
RPS3-210ENST00000528439 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
RPS3-210ENST00000528439 TNS2Q63HR2 1409 aa13.01□□□□□ -0.33
RPS3-210ENST00000528439 GLI3P10071 1580 aa13□□□□□ -0.33
RPS3-210ENST00000528439 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
RPS3-210ENST00000528439 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
RPS3-210ENST00000528439 PLIN1O60240 522 aa13□□□□□ -0.33
RPS3-210ENST00000528439 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
RPS3-210ENST00000528439 C8orf58Q8NAV2 365 aa13□□□□□ -0.33
RPS3-210ENST00000528439 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
RPS3-210ENST00000528439 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
RPS3-210ENST00000528439 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
RPS3-210ENST00000528439 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
RPS3-210ENST00000528439 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
RPS3-210ENST00000528439 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
RPS3-210ENST00000528439 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
RPS3-210ENST00000528439 NEFLP07196 543 aa12.98□□□□□ -0.33
RPS3-210ENST00000528439 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms