RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 PARD3Q8TEW0 1356 aa15.22■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 IGSF1Q8N6C5 1336 aa15.21■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 EN1Q05925 392 aaPredicted RBP15.21■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 SBF2Q86WG5 1849 aa15.21■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 PLSCR1O15162 318 aa15.2■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 IL13P35225 146 aa15.2■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 KDRP35968 1356 aa15.16■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 KCNQ2O43526 872 aa15.16■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 EZH2Q15910 746 aaKnown RBP15.16■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 PKD1L3Q7Z443 1732 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 CYP27B1O15528 508 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 PTF1AQ7RTS3 328 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 ACSBG1Q96GR2 724 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 CFAP53Q96M91 514 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 KAT6BQ8WYB5 2073 aa15.15■□□□□ 0.02
TMX2-CTNND1-201ENST00000528395 PLEKHO1Q53GL0 409 aaPredicted RBP15.14■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 RGPD3A6NKT7 1758 aaPredicted RBP15.13■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 RGPD4Q7Z3J3 1758 aa15.13■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 RALBP1Q15311 655 aa15.12■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 PHKG2P15735 406 aa15.11■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 RREB1Q92766 1687 aa15.09■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 TXNRD1Q16881 649 aa15.09■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 PROM2Q8N271 834 aa15.09■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 BTAF1O14981 1849 aa15.08■□□□□ 0.01
TMX2-CTNND1-201ENST00000528395 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0
TMX2-CTNND1-201ENST00000528395 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
TMX2-CTNND1-201ENST00000528395 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
TMX2-CTNND1-201ENST00000528395 HMOX1P09601 288 aa15.07■□□□□ 0
TMX2-CTNND1-201ENST00000528395 C1orf141Q5JVX7 400 aa15.07■□□□□ 0
TMX2-CTNND1-201ENST00000528395 SLC27A3Q5K4L6 730 aa15.07■□□□□ 0
TMX2-CTNND1-201ENST00000528395 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
TMX2-CTNND1-201ENST00000528395 DCAF5Q96JK2 942 aa15.07■□□□□ 0
TMX2-CTNND1-201ENST00000528395 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
TMX2-CTNND1-201ENST00000528395 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
TMX2-CTNND1-201ENST00000528395 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
TMX2-CTNND1-201ENST00000528395 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
TMX2-CTNND1-201ENST00000528395 FCHSD2O94868 740 aa15.04■□□□□ -0
TMX2-CTNND1-201ENST00000528395 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
TMX2-CTNND1-201ENST00000528395 PIGBQ92521 554 aa15.04■□□□□ -0
TMX2-CTNND1-201ENST00000528395 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
TMX2-CTNND1-201ENST00000528395 TMOD3Q9NYL9 352 aa15.04■□□□□ -0
TMX2-CTNND1-201ENST00000528395 MYBBP1AQ9BQG0 1328 aaKnown RBP15.03■□□□□ -0
TMX2-CTNND1-201ENST00000528395 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
TMX2-CTNND1-201ENST00000528395 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -02e-10■■□□□ 12.3
TMX2-CTNND1-201ENST00000528395 R3HDM1Q15032 1099 aaKnown RBP15.03■□□□□ -0
TMX2-CTNND1-201ENST00000528395 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
TMX2-CTNND1-201ENST00000528395 ITGB4P16144 1822 aa15.02■□□□□ -0
TMX2-CTNND1-201ENST00000528395 PSDA5PKW4 1024 aaPredicted RBP15.02■□□□□ -0
TMX2-CTNND1-201ENST00000528395 MTHFSDQ2M296 383 aaKnown RBP15.02■□□□□ -0
TMX2-CTNND1-201ENST00000528395 RSPH6AQ9H0K4 717 aa15.02■□□□□ -0
TMX2-CTNND1-201ENST00000528395 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 PRKRIP1Q9H875 184 aaPredicted RBP15.01□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 LY75O60449 1722 aa15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 PRKAR2BP31323 418 aa15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 CABP4P57796 275 aa15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 SLC15A2Q16348 729 aa15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 STK32BQ9NY57 414 aa15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 CCNL1Q9UK58 526 aaPredicted RBP15□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 PAPPAQ13219 1627 aa14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 GNAT3A8MTJ3 354 aa14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 PHACTR3Q96KR7 559 aa14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 NEFMP07197 916 aa14.96□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
TMX2-CTNND1-201ENST00000528395 MAP3K5Q99683 1374 aa14.96□□□□□ -0.02
TMX2-CTNND1-201ENST00000528395 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.02
TMX2-CTNND1-201ENST00000528395 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
TMX2-CTNND1-201ENST00000528395 SIK1P57059 783 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms