RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SGIP1Q9BQI5 828 aa21.62■■□□□ 1.05
CLNS1A-210ENST00000528364 TIMELESSQ9UNS1 1208 aa21.62■■□□□ 1.05
CLNS1A-210ENST00000528364 AKT1S1Q96B36 256 aa21.61■■□□□ 1.05
CLNS1A-210ENST00000528364 EMILIN1Q9Y6C2 1016 aa21.61■■□□□ 1.05
CLNS1A-210ENST00000528364 YY1P25490 414 aa21.6■■□□□ 1.05
CLNS1A-210ENST00000528364 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
CLNS1A-210ENST00000528364 MYOM1P52179 1685 aa21.6■■□□□ 1.05
CLNS1A-210ENST00000528364 PAPPAQ13219 1627 aa21.59■■□□□ 1.05
CLNS1A-210ENST00000528364 RAPGEF4Q8WZA2 1011 aa21.59■■□□□ 1.05
CLNS1A-210ENST00000528364 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
CLNS1A-210ENST00000528364 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
CLNS1A-210ENST00000528364 NSD2O96028 1365 aa21.59■■□□□ 1.05
CLNS1A-210ENST00000528364 INSRP06213 1382 aa21.59■■□□□ 1.05
CLNS1A-210ENST00000528364 DCAF8L1A6NGE4 600 aa21.58■■□□□ 1.05
CLNS1A-210ENST00000528364 TATP17735 454 aaPredicted RBP21.58■■□□□ 1.05
CLNS1A-210ENST00000528364 SLC27A3Q5K4L6 730 aa21.58■■□□□ 1.05
CLNS1A-210ENST00000528364 SYT17Q9BSW7 474 aa21.58■■□□□ 1.05
CLNS1A-210ENST00000528364 SHANK3Q9BYB0 1731 aa21.58■■□□□ 1.04
CLNS1A-210ENST00000528364 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
CLNS1A-210ENST00000528364 KIF20BQ96Q89 1820 aa21.57■■□□□ 1.04
CLNS1A-210ENST00000528364 FLT4P35916 1363 aa21.56■■□□□ 1.04
CLNS1A-210ENST00000528364 DOT1LQ8TEK3 1739 aa21.55■■□□□ 1.04
CLNS1A-210ENST00000528364 ARXQ96QS3 562 aa21.55■■□□□ 1.04
CLNS1A-210ENST00000528364 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
CLNS1A-210ENST00000528364 PNPLA7Q6ZV29 1317 aa21.55■■□□□ 1.04
CLNS1A-210ENST00000528364 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
CLNS1A-210ENST00000528364 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
CLNS1A-210ENST00000528364 CLSPNQ9HAW4 1339 aa21.54■■□□□ 1.04
CLNS1A-210ENST00000528364 CYP27B1O15528 508 aa21.53■■□□□ 1.04
CLNS1A-210ENST00000528364 CCNL1Q9UK58 526 aaPredicted RBP21.53■■□□□ 1.04
CLNS1A-210ENST00000528364 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
CLNS1A-210ENST00000528364 HSPA5P11021 654 aaKnown RBP21.5■■□□□ 1.03
CLNS1A-210ENST00000528364 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
CLNS1A-210ENST00000528364 MPRIPQ6WCQ1 1025 aa21.49■■□□□ 1.03
CLNS1A-210ENST00000528364 SLC16A10Q8TF71 515 aa21.49■■□□□ 1.03
CLNS1A-210ENST00000528364 EYA1Q99502 592 aa21.49■■□□□ 1.03
CLNS1A-210ENST00000528364 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
CLNS1A-210ENST00000528364 PCDH11XQ9BZA7 1347 aa21.49■■□□□ 1.03
CLNS1A-210ENST00000528364 PCDH11YQ9BZA8 1340 aa21.49■■□□□ 1.03
CLNS1A-210ENST00000528364 LY75O60449 1722 aa21.48■■□□□ 1.03
CLNS1A-210ENST00000528364 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
CLNS1A-210ENST00000528364 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
CLNS1A-210ENST00000528364 MAP2P11137 1827 aaKnown RBP21.47■■□□□ 1.03
CLNS1A-210ENST00000528364 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
CLNS1A-210ENST00000528364 COL23A1Q86Y22 540 aaPredicted RBP21.46■■□□□ 1.03
CLNS1A-210ENST00000528364 TUBGCP6Q96RT7 1819 aa21.45■■□□□ 1.03
CLNS1A-210ENST00000528364 MSH5O43196 834 aa21.45■■□□□ 1.02
CLNS1A-210ENST00000528364 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
CLNS1A-210ENST00000528364 PANK3Q9H999 370 aa21.45■■□□□ 1.02
CLNS1A-210ENST00000528364 POLD1P28340 1107 aa21.44■■□□□ 1.02
CLNS1A-210ENST00000528364 PIGBQ92521 554 aa21.43■■□□□ 1.02
CLNS1A-210ENST00000528364 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
CLNS1A-210ENST00000528364 PALLDQ8WX93 1383 aa21.42■■□□□ 1.02
CLNS1A-210ENST00000528364 SPG7Q9UQ90 795 aa21.42■■□□□ 1.02
CLNS1A-210ENST00000528364 NCAPD2Q15021 1401 aa21.41■■□□□ 1.02
CLNS1A-210ENST00000528364 EIF4A2Q14240 407 aaKnown RBP21.41■■□□□ 1.02
CLNS1A-210ENST00000528364 NKX1-1Q15270 411 aaPredicted RBP21.41■■□□□ 1.02
CLNS1A-210ENST00000528364 MSL1Q68DK7 614 aa21.41■■□□□ 1.02
CLNS1A-210ENST00000528364 MAP3K5Q99683 1374 aa21.4■■□□□ 1.02
CLNS1A-210ENST00000528364 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
CLNS1A-210ENST00000528364 GPR162Q16538 588 aa21.39■■□□□ 1.01
CLNS1A-210ENST00000528364 NLGN2Q8NFZ4 835 aa21.39■■□□□ 1.01
CLNS1A-210ENST00000528364 ITGB4P16144 1822 aa21.39■■□□□ 1.01
CLNS1A-210ENST00000528364 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
CLNS1A-210ENST00000528364 AMIGO3Q86WK7 504 aa21.38■■□□□ 1.01
CLNS1A-210ENST00000528364 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
CLNS1A-210ENST00000528364 SMARCC1Q92922 1105 aaPredicted RBP21.37■■□□□ 1.01
CLNS1A-210ENST00000528364 COL24A1Q17RW2 1714 aa21.37■■□□□ 1.01
CLNS1A-210ENST00000528364 PKD1L3Q7Z443 1732 aa21.37■■□□□ 1.01
CLNS1A-210ENST00000528364 PHKG2P15735 406 aa21.36■■□□□ 1.01
CLNS1A-210ENST00000528364 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
CLNS1A-210ENST00000528364 ZNF784Q8NCA9 323 aaPredicted RBP21.36■■□□□ 1.01
CLNS1A-210ENST00000528364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.36■■□□□ 1.011e-8■■■□□ 18.4
CLNS1A-210ENST00000528364 ASAP1Q9ULH1 1129 aa21.36■■□□□ 1.01
CLNS1A-210ENST00000528364 IFNL2Q8IZJ0 200 aa21.35■■□□□ 1.01
CLNS1A-210ENST00000528364 C5P01031 1676 aa21.34■■□□□ 1.01
CLNS1A-210ENST00000528364 TMOD3Q9NYL9 352 aa21.33■■□□□ 1.01
CLNS1A-210ENST00000528364 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1.01
CLNS1A-210ENST00000528364 LOC102724428A0A0B4J2F2 783 aa21.32■■□□□ 1
CLNS1A-210ENST00000528364 PHF14O94880 888 aa21.32■■□□□ 1
CLNS1A-210ENST00000528364 SIK1P57059 783 aa21.32■■□□□ 1
CLNS1A-210ENST00000528364 MORC1Q86VD1 984 aa21.32■■□□□ 1
CLNS1A-210ENST00000528364 LINC00116Q8NCU8 138 aa21.32■■□□□ 1
CLNS1A-210ENST00000528364 AK7Q96M32 723 aa21.32■■□□□ 1
CLNS1A-210ENST00000528364 ITPK1Q13572 414 aa21.31■■□□□ 1
CLNS1A-210ENST00000528364 FLAD1Q8NFF5 587 aa21.31■■□□□ 1
CLNS1A-210ENST00000528364 ATG3Q9NT62 314 aa21.31■■□□□ 1
CLNS1A-210ENST00000528364 IGSF1Q8N6C5 1336 aa21.3■■□□□ 1
CLNS1A-210ENST00000528364 CHD4Q14839 1912 aa21.3■■□□□ 1
CLNS1A-210ENST00000528364 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
CLNS1A-210ENST00000528364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.28■■□□□ 1
CLNS1A-210ENST00000528364 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 1
CLNS1A-210ENST00000528364 ATP6V1AP38606 617 aa21.28■■□□□ 1
CLNS1A-210ENST00000528364 C4BP0C0L5 1744 aa21.28■■□□□ 1
CLNS1A-210ENST00000528364 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
CLNS1A-210ENST00000528364 PLEKHO1Q53GL0 409 aaPredicted RBP21.27■■□□□ 1
CLNS1A-210ENST00000528364 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
CLNS1A-210ENST00000528364 UTRNP46939 3433 aa21.26■□□□□ 0.99
CLNS1A-210ENST00000528364 ZNF530Q6P9A1 599 aaPredicted RBP21.25■□□□□ 0.99
CLNS1A-210ENST00000528364 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms