RNA–Protein interactions for RNA: ENST00000528018.1

PSMA1-206, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-206ENST00000528018 DDB1Q16531 1140 aa23.41■■□□□ 1.34
PSMA1-206ENST00000528018 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
PSMA1-206ENST00000528018 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
PSMA1-206ENST00000528018 EXOC5O00471 708 aa23.39■■□□□ 1.33
PSMA1-206ENST00000528018 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.33
PSMA1-206ENST00000528018 CCDC184Q52MB2 194 aa23.38■■□□□ 1.33
PSMA1-206ENST00000528018 PDE3BQ13370 1112 aa23.37■■□□□ 1.33
PSMA1-206ENST00000528018 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
PSMA1-206ENST00000528018 PKD1L3Q7Z443 1732 aa23.36■■□□□ 1.33
PSMA1-206ENST00000528018 ZCRB1Q8TBF4 217 aaKnown RBP23.36■■□□□ 1.33
PSMA1-206ENST00000528018 KRT27Q7Z3Y8 459 aa23.35■■□□□ 1.33
PSMA1-206ENST00000528018 RSPH6AQ9H0K4 717 aa23.35■■□□□ 1.33
PSMA1-206ENST00000528018 FCHSD2O94868 740 aa23.34■■□□□ 1.33
PSMA1-206ENST00000528018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
PSMA1-206ENST00000528018 SPG7Q9UQ90 795 aa23.34■■□□□ 1.33
PSMA1-206ENST00000528018 PRKAR2BP31323 418 aa23.33■■□□□ 1.33
PSMA1-206ENST00000528018 PLEKHO1Q53GL0 409 aaPredicted RBP23.33■■□□□ 1.33
PSMA1-206ENST00000528018 PCDH11XQ9BZA7 1347 aa23.33■■□□□ 1.32
PSMA1-206ENST00000528018 PCDH11YQ9BZA8 1340 aa23.33■■□□□ 1.32
PSMA1-206ENST00000528018 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
PSMA1-206ENST00000528018 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
PSMA1-206ENST00000528018 MIER1Q8N108 512 aa23.32■■□□□ 1.32
PSMA1-206ENST00000528018 SHANK3Q9BYB0 1731 aa23.32■■□□□ 1.32
PSMA1-206ENST00000528018 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
PSMA1-206ENST00000528018 NEFMP07197 916 aa23.3■■□□□ 1.32
PSMA1-206ENST00000528018 DDX54Q8TDD1 881 aaKnown RBP23.3■■□□□ 1.32
PSMA1-206ENST00000528018 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
PSMA1-206ENST00000528018 ZNF530Q6P9A1 599 aaPredicted RBP23.28■■□□□ 1.32
PSMA1-206ENST00000528018 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
PSMA1-206ENST00000528018 ADAMTS8Q9UP79 889 aa23.27■■□□□ 1.32
PSMA1-206ENST00000528018 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
PSMA1-206ENST00000528018 CYP27B1O15528 508 aa23.26■■□□□ 1.31
PSMA1-206ENST00000528018 FAM182BQ5T319 152 aa23.26■■□□□ 1.31
PSMA1-206ENST00000528018 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
PSMA1-206ENST00000528018 IFNL2Q8IZJ0 200 aa23.25■■□□□ 1.31
PSMA1-206ENST00000528018 GAS2L2Q8NHY3 880 aa23.25■■□□□ 1.31
PSMA1-206ENST00000528018 PHKG2P15735 406 aa23.24■■□□□ 1.31
PSMA1-206ENST00000528018 MTHFSDQ2M296 383 aaKnown RBP23.24■■□□□ 1.31
PSMA1-206ENST00000528018 PHACTR3Q96KR7 559 aa23.24■■□□□ 1.31
PSMA1-206ENST00000528018 PLEKHF1Q96S99 279 aa23.24■■□□□ 1.31
PSMA1-206ENST00000528018 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
PSMA1-206ENST00000528018 BCL9O00512 1426 aa23.23■■□□□ 1.31
PSMA1-206ENST00000528018 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
PSMA1-206ENST00000528018 HSP90AB1P08238 724 aaKnown RBP23.21■■□□□ 1.31
PSMA1-206ENST00000528018 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
PSMA1-206ENST00000528018 AKAP4Q5JQC9 854 aa23.2■■□□□ 1.3
PSMA1-206ENST00000528018 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
PSMA1-206ENST00000528018 MAP3K5Q99683 1374 aa23.19■■□□□ 1.3
PSMA1-206ENST00000528018 NKX1-1Q15270 411 aaPredicted RBP23.19■■□□□ 1.3
PSMA1-206ENST00000528018 DOT1LQ8TEK3 1739 aa23.18■■□□□ 1.3
PSMA1-206ENST00000528018 NFE2L2Q16236 605 aa23.17■■□□□ 1.3
PSMA1-206ENST00000528018 DCAF5Q96JK2 942 aa23.17■■□□□ 1.3
PSMA1-206ENST00000528018 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
PSMA1-206ENST00000528018 ACSBG1Q96GR2 724 aa23.15■■□□□ 1.3
PSMA1-206ENST00000528018 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
PSMA1-206ENST00000528018 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
PSMA1-206ENST00000528018 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.3
PSMA1-206ENST00000528018 MPRIPQ6WCQ1 1025 aa23.14■■□□□ 1.29
PSMA1-206ENST00000528018 SBF2Q86WG5 1849 aa23.13■■□□□ 1.29
PSMA1-206ENST00000528018 TRIM37O94972 964 aa23.12■■□□□ 1.29
PSMA1-206ENST00000528018 TMPOP42166 694 aaKnown RBP23.12■■□□□ 1.29
PSMA1-206ENST00000528018 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
PSMA1-206ENST00000528018 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
PSMA1-206ENST00000528018 ADAMTS7Q9UKP4 1686 aa23.12■■□□□ 1.29
PSMA1-206ENST00000528018 SCN11AQ9UI33 1791 aa23.11■■□□□ 1.29
PSMA1-206ENST00000528018 APAF1O14727 1248 aa23.1■■□□□ 1.29
PSMA1-206ENST00000528018 RNMTO43148 476 aaKnown RBP23.1■■□□□ 1.29
PSMA1-206ENST00000528018 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
PSMA1-206ENST00000528018 PRIM1P49642 420 aaKnown RBP23.1■■□□□ 1.29
PSMA1-206ENST00000528018 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
PSMA1-206ENST00000528018 RRP7AQ9Y3A4 280 aaKnown RBP23.1■■□□□ 1.29
PSMA1-206ENST00000528018 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
PSMA1-206ENST00000528018 ERVV-2B6SEH9 535 aa23.09■■□□□ 1.29
PSMA1-206ENST00000528018 KCNQ2O43526 872 aa23.09■■□□□ 1.29
PSMA1-206ENST00000528018 RIPK4P57078 832 aa23.09■■□□□ 1.29
PSMA1-206ENST00000528018 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
PSMA1-206ENST00000528018 TNS1Q9HBL0 1735 aaKnown RBP23.08■■□□□ 1.29
PSMA1-206ENST00000528018 NEUROD2Q15784 382 aa23.08■■□□□ 1.29
PSMA1-206ENST00000528018 LGR6Q9HBX8 967 aa23.08■■□□□ 1.29
PSMA1-206ENST00000528018 TMOD3Q9NYL9 352 aa23.08■■□□□ 1.29
PSMA1-206ENST00000528018 MRC1P22897 1456 aa23.08■■□□□ 1.29
PSMA1-206ENST00000528018 KAT6BQ8WYB5 2073 aa23.07■■□□□ 1.28
PSMA1-206ENST00000528018 CABP4P57796 275 aa23.07■■□□□ 1.28
PSMA1-206ENST00000528018 SF3B2Q13435 895 aaKnown RBP23.07■■□□□ 1.28
PSMA1-206ENST00000528018 CCDC125Q86Z20 511 aa23.07■■□□□ 1.28
PSMA1-206ENST00000528018 EP400Q96L91 3159 aa23.07■■□□□ 1.28
PSMA1-206ENST00000528018 ITGB4P16144 1822 aa23.06■■□□□ 1.28
PSMA1-206ENST00000528018 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
PSMA1-206ENST00000528018 MCM10Q7L590 875 aa23.06■■□□□ 1.28
PSMA1-206ENST00000528018 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
PSMA1-206ENST00000528018 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
PSMA1-206ENST00000528018 TEFQ10587 303 aa23.05■■□□□ 1.28
PSMA1-206ENST00000528018 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
PSMA1-206ENST00000528018 UPF1Q92900 1129 aaKnown RBP eCLIP23.05■■□□□ 1.28
PSMA1-206ENST00000528018 BTAF1O14981 1849 aa23.05■■□□□ 1.28
PSMA1-206ENST00000528018 DCTN1Q14203 1278 aa23.04■■□□□ 1.28
PSMA1-206ENST00000528018 SLC52A2Q9HAB3 445 aa23.04■■□□□ 1.28
PSMA1-206ENST00000528018 PIGBQ92521 554 aa23.03■■□□□ 1.28
PSMA1-206ENST00000528018 APBA3O96018 575 aa23.02■■□□□ 1.28
PSMA1-206ENST00000528018 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms