RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KNSTRNQ9Y448 316 aa45.33■■■■■ 4.85
SSSCA1-205ENST00000527920 NCAPD2Q15021 1401 aa45.33■■■■■ 4.85
SSSCA1-205ENST00000527920 DDX54Q8TDD1 881 aaKnown RBP45.32■■■■■ 4.85
SSSCA1-205ENST00000527920 MAP2P11137 1827 aaKnown RBP45.31■■■■■ 4.84
SSSCA1-205ENST00000527920 ACSBG1Q96GR2 724 aa45.29■■■■■ 4.84
SSSCA1-205ENST00000527920 TATP17735 454 aaPredicted RBP45.26■■■■■ 4.84
SSSCA1-205ENST00000527920 TNNT2P45379 298 aaPredicted RBP45.26■■■■■ 4.84
SSSCA1-205ENST00000527920 LRP5O75197 1615 aa45.26■■■■■ 4.84
SSSCA1-205ENST00000527920 SHANK3Q9BYB0 1731 aa45.25■■■■■ 4.83
SSSCA1-205ENST00000527920 PROM2Q8N271 834 aa45.24■■■■■ 4.83
SSSCA1-205ENST00000527920 AMER1Q5JTC6 1135 aaPredicted RBP45.22■■■■■ 4.83
SSSCA1-205ENST00000527920 MORC1Q86VD1 984 aa45.22■■■■■ 4.83
SSSCA1-205ENST00000527920 TXNRD1Q16881 649 aa45.2■■■■■ 4.83
SSSCA1-205ENST00000527920 EYA1Q99502 592 aa45.18■■■■■ 4.82
SSSCA1-205ENST00000527920 PCDH11XQ9BZA7 1347 aa45.17■■■■■ 4.82
SSSCA1-205ENST00000527920 PCDH11YQ9BZA8 1340 aa45.17■■■■■ 4.82
SSSCA1-205ENST00000527920 BTAF1O14981 1849 aa45.16■■■■■ 4.82
SSSCA1-205ENST00000527920 PER1O15534 1290 aaPredicted RBP45.15■■■■■ 4.82
SSSCA1-205ENST00000527920 EIF4A2Q14240 407 aaKnown RBP45.15■■■■■ 4.82
SSSCA1-205ENST00000527920 PLEKHG2Q9H7P9 1386 aa45.12■■■■■ 4.81
SSSCA1-205ENST00000527920 ANO8Q9HCE9 1232 aaPredicted RBP45.11■■■■■ 4.81
SSSCA1-205ENST00000527920 PKD1L3Q7Z443 1732 aa45.09■■■■■ 4.81
SSSCA1-205ENST00000527920 PRIM1P49642 420 aaKnown RBP45.09■■■■■ 4.81
SSSCA1-205ENST00000527920 DOT1LQ8TEK3 1739 aa45.09■■■■■ 4.81
SSSCA1-205ENST00000527920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP45.08■■■■■ 4.81
SSSCA1-205ENST00000527920 KAT6BQ8WYB5 2073 aa45.08■■■■■ 4.81
SSSCA1-205ENST00000527920 IGSF1Q8N6C5 1336 aa45.05■■■■■ 4.8
SSSCA1-205ENST00000527920 NPC1L1Q9UHC9 1359 aa45.05■■■■■ 4.8
SSSCA1-205ENST00000527920 CYP27B1O15528 508 aa45.04■■■■■ 4.8
SSSCA1-205ENST00000527920 SYTL4Q96C24 671 aaPredicted RBP45.04■■■■■ 4.8
SSSCA1-205ENST00000527920 SPG7Q9UQ90 795 aa45.04■■■■■ 4.8
SSSCA1-205ENST00000527920 STK32BQ9NY57 414 aa45.01■■■■■ 4.8
SSSCA1-205ENST00000527920 SLC27A3Q5K4L6 730 aa44.99■■■■■ 4.79
SSSCA1-205ENST00000527920 PAPPAQ13219 1627 aa44.97■■■■■ 4.79
SSSCA1-205ENST00000527920 NKX1-1Q15270 411 aaPredicted RBP44.97■■■■■ 4.79
SSSCA1-205ENST00000527920 SLC15A2Q16348 729 aa44.97■■■■■ 4.79
SSSCA1-205ENST00000527920 LRRC4BQ9NT99 713 aa44.93■■■■■ 4.78
SSSCA1-205ENST00000527920 CC2D1BQ5T0F9 858 aaKnown RBP44.91■■■■■ 4.78
SSSCA1-205ENST00000527920 CASZ1Q86V15 1759 aa44.9■■■■■ 4.78
SSSCA1-205ENST00000527920 SPON1Q9HCB6 807 aa44.88■■■■■ 4.78
SSSCA1-205ENST00000527920 LY75O60449 1722 aa44.87■■■■■ 4.77
SSSCA1-205ENST00000527920 IL13P35225 146 aa44.87■■■■■ 4.77
SSSCA1-205ENST00000527920 IFNL2Q8IZJ0 200 aa44.87■■■■■ 4.77
SSSCA1-205ENST00000527920 MTHFSP49914 203 aa44.86■■■■■ 4.77
SSSCA1-205ENST00000527920 PHKG2P15735 406 aa44.85■■■■■ 4.77
SSSCA1-205ENST00000527920 TOGARAM1Q9Y4F4 1720 aa44.84■■■■■ 4.77
SSSCA1-205ENST00000527920 KDRP35968 1356 aa44.84■■■■■ 4.77
SSSCA1-205ENST00000527920 AMOTQ4VCS5 1084 aa44.8■■■■■ 4.76
SSSCA1-205ENST00000527920 AKT1S1Q96B36 256 aa44.8■■■■■ 4.76
SSSCA1-205ENST00000527920 ZNF827Q17R98 1081 aa44.79■■■■■ 4.76
SSSCA1-205ENST00000527920 PLEKHO1Q53GL0 409 aaPredicted RBP44.79■■■■■ 4.76
SSSCA1-205ENST00000527920 MPRIPQ6WCQ1 1025 aa44.79■■■■■ 4.76
SSSCA1-205ENST00000527920 PDGFDQ9GZP0 370 aaPredicted RBP44.79■■■■■ 4.76
SSSCA1-205ENST00000527920 CCNL1Q9UK58 526 aaPredicted RBP44.78■■■■■ 4.76
SSSCA1-205ENST00000527920 AEBP1Q8IUX7 1158 aa44.77■■■■■ 4.76
SSSCA1-205ENST00000527920 HMGB2P26583 209 aaKnown RBP44.76■■■■■ 4.76
SSSCA1-205ENST00000527920 SULT6B1Q6IMI4 303 aa44.76■■■■■ 4.76
SSSCA1-205ENST00000527920 PALLDQ8WX93 1383 aa44.76■■■■■ 4.76
SSSCA1-205ENST00000527920 SMARCC1Q92922 1105 aaPredicted RBP44.75■■■■■ 4.75
SSSCA1-205ENST00000527920 ITGB4P16144 1822 aa44.74■■■■■ 4.75
SSSCA1-205ENST00000527920 PIGBQ92521 554 aa44.74■■■■■ 4.75
SSSCA1-205ENST00000527920 HSP90AB1P08238 724 aaKnown RBP44.73■■■■■ 4.75
SSSCA1-205ENST00000527920 KCNQ4P56696 695 aa44.7■■■■■ 4.75
SSSCA1-205ENST00000527920 ZBTB7AO95365 584 aa44.69■■■■■ 4.74
SSSCA1-205ENST00000527920 MTFR1LQ9H019 292 aa44.69■■■■■ 4.74
SSSCA1-205ENST00000527920 TMOD3Q9NYL9 352 aa44.69■■■■■ 4.74
SSSCA1-205ENST00000527920 QSER1Q2KHR3 1735 aa44.68■■■■■ 4.74
SSSCA1-205ENST00000527920 DIAPH1O60610 1272 aaKnown RBP44.68■■■■■ 4.74
SSSCA1-205ENST00000527920 ZNF530Q6P9A1 599 aaPredicted RBP44.68■■■■■ 4.74
SSSCA1-205ENST00000527920 DCAF5Q96JK2 942 aa44.68■■■■■ 4.74
SSSCA1-205ENST00000527920 ERVV-2B6SEH9 535 aa44.65■■■■■ 4.74
SSSCA1-205ENST00000527920 PPP1R1BQ9UD71 204 aaPredicted RBP44.65■■■■■ 4.74
SSSCA1-205ENST00000527920 COL3A1P02461 1466 aaPredicted RBP44.65■■■■■ 4.74
SSSCA1-205ENST00000527920 TFCP2L1Q9NZI6 479 aa44.64■■■■■ 4.74
SSSCA1-205ENST00000527920 PTGER2P43116 358 aa44.63■■■■■ 4.74
SSSCA1-205ENST00000527920 PNPLA7Q6ZV29 1317 aa44.61■■■■■ 4.73
SSSCA1-205ENST00000527920 CNGB1Q14028 1251 aaPredicted RBP44.61■■■■■ 4.73
SSSCA1-205ENST00000527920 SLC16A10Q8TF71 515 aa44.61■■■■■ 4.73
SSSCA1-205ENST00000527920 C1orf141Q5JVX7 400 aa44.6■■■■■ 4.73
SSSCA1-205ENST00000527920 KDM6AO15550 1401 aaPredicted RBP44.59■■■■■ 4.73
SSSCA1-205ENST00000527920 ATF5Q9Y2D1 282 aaPredicted RBP44.59■■■■■ 4.73
SSSCA1-205ENST00000527920 C5P01031 1676 aa44.58■■■■■ 4.73
SSSCA1-205ENST00000527920 SGIP1Q9BQI5 828 aa44.57■■■■■ 4.73
SSSCA1-205ENST00000527920 ASAP1Q9ULH1 1129 aa44.55■■■■■ 4.72
SSSCA1-205ENST00000527920 TUBGCP6Q96RT7 1819 aa44.53■■■■■ 4.72
SSSCA1-205ENST00000527920 LOC102724428A0A0B4J2F2 783 aa44.53■■■■■ 4.72
SSSCA1-205ENST00000527920 HMOX1P09601 288 aa44.53■■■■■ 4.72
SSSCA1-205ENST00000527920 SIK1P57059 783 aa44.53■■■■■ 4.72
SSSCA1-205ENST00000527920 ATG3Q9NT62 314 aa44.52■■■■■ 4.72
SSSCA1-205ENST00000527920 TAF1LQ8IZX4 1826 aa44.51■■■■■ 4.72
SSSCA1-205ENST00000527920 AKAP4Q5JQC9 854 aa44.5■■■■■ 4.71
SSSCA1-205ENST00000527920 CFAP53Q96M91 514 aa44.5■■■■■ 4.71
SSSCA1-205ENST00000527920 CABP4P57796 275 aa44.48■■■■■ 4.71
SSSCA1-205ENST00000527920 PPP2R1AP30153 589 aa44.46■■■■■ 4.71
SSSCA1-205ENST00000527920 FLAD1Q8NFF5 587 aa44.46■■■■■ 4.71
SSSCA1-205ENST00000527920 C4BP0C0L5 1744 aa44.45■■■■■ 4.71
SSSCA1-205ENST00000527920 U2SURPO15042 1029 aaKnown RBP44.43■■■■■ 4.7
SSSCA1-205ENST00000527920 COL24A1Q17RW2 1714 aa44.42■■■■■ 4.7
SSSCA1-205ENST00000527920 COL23A1Q86Y22 540 aaPredicted RBP44.41■■■■■ 4.7
SSSCA1-205ENST00000527920 AK7Q96M32 723 aa44.41■■■■■ 4.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms