RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
ATM-213ENST00000527891 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
ATM-213ENST00000527891 KAT6BQ8WYB5 2073 aa24.03■■□□□ 1.44
ATM-213ENST00000527891 DOT1LQ8TEK3 1739 aa24.02■■□□□ 1.44
ATM-213ENST00000527891 SHANK3Q9BYB0 1731 aa24.02■■□□□ 1.44
ATM-213ENST00000527891 AKT1S1Q96B36 256 aa24.02■■□□□ 1.44
ATM-213ENST00000527891 SYT17Q9BSW7 474 aa24.02■■□□□ 1.44
ATM-213ENST00000527891 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
ATM-213ENST00000527891 NSD2O96028 1365 aa24.01■■□□□ 1.43
ATM-213ENST00000527891 UTRNP46939 3433 aa24■■□□□ 1.43
ATM-213ENST00000527891 USHBP1Q8N6Y0 703 aa24■■□□□ 1.43
ATM-213ENST00000527891 KIF20BQ96Q89 1820 aa24■■□□□ 1.43
ATM-213ENST00000527891 RAPGEF4Q8WZA2 1011 aa23.99■■□□□ 1.43
ATM-213ENST00000527891 ARXQ96QS3 562 aa23.99■■□□□ 1.43
ATM-213ENST00000527891 INSRP06213 1382 aa23.99■■□□□ 1.43
ATM-213ENST00000527891 FLT4P35916 1363 aa23.99■■□□□ 1.43
ATM-213ENST00000527891 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
ATM-213ENST00000527891 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
ATM-213ENST00000527891 QSER1Q2KHR3 1735 aa23.96■■□□□ 1.43
ATM-213ENST00000527891 TATP17735 454 aaPredicted RBP23.96■■□□□ 1.43
ATM-213ENST00000527891 KCNQ4P56696 695 aa23.96■■□□□ 1.43
ATM-213ENST00000527891 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
ATM-213ENST00000527891 TIMELESSQ9UNS1 1208 aa23.96■■□□□ 1.43
ATM-213ENST00000527891 LY75O60449 1722 aa23.96■■□□□ 1.43
ATM-213ENST00000527891 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
ATM-213ENST00000527891 MAP3K5Q99683 1374 aa23.95■■□□□ 1.42
ATM-213ENST00000527891 PNPLA7Q6ZV29 1317 aa23.95■■□□□ 1.42
ATM-213ENST00000527891 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.42
ATM-213ENST00000527891 TFCP2L1Q9NZI6 479 aa23.95■■□□□ 1.42
ATM-213ENST00000527891 PCDH11XQ9BZA7 1347 aa23.93■■□□□ 1.42
ATM-213ENST00000527891 PCDH11YQ9BZA8 1340 aa23.93■■□□□ 1.42
ATM-213ENST00000527891 CCNL1Q9UK58 526 aaPredicted RBP23.93■■□□□ 1.42
ATM-213ENST00000527891 POLD1P28340 1107 aa23.91■■□□□ 1.42
ATM-213ENST00000527891 EMILIN1Q9Y6C2 1016 aa23.91■■□□□ 1.42
ATM-213ENST00000527891 TUBGCP6Q96RT7 1819 aa23.89■■□□□ 1.42
ATM-213ENST00000527891 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
ATM-213ENST00000527891 COL24A1Q17RW2 1714 aa23.87■■□□□ 1.41
ATM-213ENST00000527891 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
ATM-213ENST00000527891 CYP27B1O15528 508 aa23.85■■□□□ 1.41
ATM-213ENST00000527891 KLHL34Q8N239 644 aa23.85■■□□□ 1.41
ATM-213ENST00000527891 NCAPD2Q15021 1401 aa23.84■■□□□ 1.41
ATM-213ENST00000527891 ANKRD26Q9UPS8 1709 aa23.84■■□□□ 1.41
ATM-213ENST00000527891 PALLDQ8WX93 1383 aa23.83■■□□□ 1.41
ATM-213ENST00000527891 MPRIPQ6WCQ1 1025 aa23.83■■□□□ 1.41
ATM-213ENST00000527891 PKD1L3Q7Z443 1732 aa23.83■■□□□ 1.41
ATM-213ENST00000527891 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.4
ATM-213ENST00000527891 MSH5O43196 834 aa23.82■■□□□ 1.4
ATM-213ENST00000527891 HMGB2P26583 209 aaKnown RBP23.82■■□□□ 1.4
ATM-213ENST00000527891 ZNF784Q8NCA9 323 aaPredicted RBP23.82■■□□□ 1.4
ATM-213ENST00000527891 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
ATM-213ENST00000527891 GPR162Q16538 588 aa23.81■■□□□ 1.4
ATM-213ENST00000527891 COL23A1Q86Y22 540 aaPredicted RBP23.81■■□□□ 1.4
ATM-213ENST00000527891 C5P01031 1676 aa23.8■■□□□ 1.4
ATM-213ENST00000527891 POLR3GLQ9BT43 218 aa23.8■■□□□ 1.4
ATM-213ENST00000527891 TOGARAM1Q9Y4F4 1720 aa23.8■■□□□ 1.4
ATM-213ENST00000527891 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
ATM-213ENST00000527891 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
ATM-213ENST00000527891 SMARCC1Q92922 1105 aaPredicted RBP23.78■■□□□ 1.4
ATM-213ENST00000527891 EYA1Q99502 592 aa23.78■■□□□ 1.4
ATM-213ENST00000527891 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
ATM-213ENST00000527891 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
ATM-213ENST00000527891 CHD4Q14839 1912 aa23.76■■□□□ 1.39
ATM-213ENST00000527891 FLAD1Q8NFF5 587 aa23.76■■□□□ 1.39
ATM-213ENST00000527891 NLGN2Q8NFZ4 835 aa23.76■■□□□ 1.39
ATM-213ENST00000527891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.76■■□□□ 1.394e-8■■■■□ 20
ATM-213ENST00000527891 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
ATM-213ENST00000527891 PIGBQ92521 554 aa23.75■■□□□ 1.39
ATM-213ENST00000527891 MAP2P11137 1827 aaKnown RBP23.75■■□□□ 1.39
ATM-213ENST00000527891 ITGB4P16144 1822 aa23.75■■□□□ 1.39
ATM-213ENST00000527891 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
ATM-213ENST00000527891 TAF1LQ8IZX4 1826 aa23.73■■□□□ 1.39
ATM-213ENST00000527891 EIF4G2P78344 907 aaKnown RBP eCLIP23.73■■□□□ 1.39
ATM-213ENST00000527891 C4BP0C0L5 1744 aa23.73■■□□□ 1.39
ATM-213ENST00000527891 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
ATM-213ENST00000527891 AK7Q96M32 723 aa23.72■■□□□ 1.39
ATM-213ENST00000527891 EIF4A2Q14240 407 aaKnown RBP23.71■■□□□ 1.39
ATM-213ENST00000527891 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
ATM-213ENST00000527891 PHKG2P15735 406 aa23.7■■□□□ 1.38
ATM-213ENST00000527891 TMOD3Q9NYL9 352 aa23.7■■□□□ 1.38
ATM-213ENST00000527891 PLEKHG2Q9H7P9 1386 aa23.69■■□□□ 1.38
ATM-213ENST00000527891 HSPA5P11021 654 aaKnown RBP23.69■■□□□ 1.38
ATM-213ENST00000527891 LOC102724428A0A0B4J2F2 783 aa23.68■■□□□ 1.38
ATM-213ENST00000527891 SIK1P57059 783 aa23.68■■□□□ 1.38
ATM-213ENST00000527891 PANK3Q9H999 370 aa23.67■■□□□ 1.38
ATM-213ENST00000527891 PHF14O94880 888 aa23.66■■□□□ 1.38
ATM-213ENST00000527891 AMIGO3Q86WK7 504 aa23.66■■□□□ 1.38
ATM-213ENST00000527891 CD2APQ9Y5K6 639 aa23.66■■□□□ 1.38
ATM-213ENST00000527891 IGSF1Q8N6C5 1336 aa23.65■■□□□ 1.38
ATM-213ENST00000527891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.65■■□□□ 1.38
ATM-213ENST00000527891 GRIN3BO60391 1043 aa23.65■■□□□ 1.38
ATM-213ENST00000527891 YBX3P16989 372 aaKnown RBP eCLIP23.65■■□□□ 1.38
ATM-213ENST00000527891 ASAP1Q9ULH1 1129 aa23.65■■□□□ 1.38
ATM-213ENST00000527891 SSFA2P28290 1259 aa23.64■■□□□ 1.37
ATM-213ENST00000527891 LINC00116Q8NCU8 138 aa23.64■■□□□ 1.37
ATM-213ENST00000527891 UBR3Q6ZT12 1888 aa23.64■■□□□ 1.37
ATM-213ENST00000527891 ATP6V1AP38606 617 aa23.62■■□□□ 1.37
ATM-213ENST00000527891 SMIM5Q71RC9 77 aa23.62■■□□□ 1.37
ATM-213ENST00000527891 ITPK1Q13572 414 aa23.61■■□□□ 1.37
ATM-213ENST00000527891 ATG3Q9NT62 314 aa23.61■■□□□ 1.37
ATM-213ENST00000527891 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms