RNA–Protein interactions for RNA: ENST00000526463.5

CCDC84-203, Transcript of coiled-coil domain containing 84, humanhuman

TSL 1 (best)

Gene CCDC84, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-203ENST00000526463 NCAPD2Q15021 1401 aa28.28■■■□□ 2.12
CCDC84-203ENST00000526463 DDX54Q8TDD1 881 aaKnown RBP28.27■■■□□ 2.12
CCDC84-203ENST00000526463 TATP17735 454 aaPredicted RBP28.26■■■□□ 2.11
CCDC84-203ENST00000526463 ZCRB1Q8TBF4 217 aaKnown RBP28.26■■■□□ 2.11
CCDC84-203ENST00000526463 BTAF1O14981 1849 aa28.25■■■□□ 2.11
CCDC84-203ENST00000526463 PTF1AQ7RTS3 328 aa28.25■■■□□ 2.11
CCDC84-203ENST00000526463 PKD1L3Q7Z443 1732 aa28.25■■■□□ 2.11
CCDC84-203ENST00000526463 DOT1LQ8TEK3 1739 aa28.25■■■□□ 2.11
CCDC84-203ENST00000526463 PLSCR1O15162 318 aa28.24■■■□□ 2.11
CCDC84-203ENST00000526463 EIF4A2Q14240 407 aaKnown RBP28.22■■■□□ 2.11
CCDC84-203ENST00000526463 ACSBG1Q96GR2 724 aa28.22■■■□□ 2.11
CCDC84-203ENST00000526463 EYA1Q99502 592 aa28.22■■■□□ 2.11
CCDC84-203ENST00000526463 NPC1L1Q9UHC9 1359 aa28.22■■■□□ 2.11
CCDC84-203ENST00000526463 KCNQ2O43526 872 aa28.21■■■□□ 2.11
CCDC84-203ENST00000526463 CC2D1BQ5T0F9 858 aaKnown RBP28.2■■■□□ 2.1
CCDC84-203ENST00000526463 PCDH11XQ9BZA7 1347 aa28.18■■■□□ 2.1
CCDC84-203ENST00000526463 PCDH11YQ9BZA8 1340 aa28.18■■■□□ 2.1
CCDC84-203ENST00000526463 IGSF1Q8N6C5 1336 aa28.16■■■□□ 2.1
CCDC84-203ENST00000526463 PSDA5PKW4 1024 aaPredicted RBP28.15■■■□□ 2.1
CCDC84-203ENST00000526463 NBPF14Q5TI25 921 aa28.13■■■□□ 2.09
CCDC84-203ENST00000526463 R3HDM1Q15032 1099 aaKnown RBP28.12■■■□□ 2.09
CCDC84-203ENST00000526463 SPG7Q9UQ90 795 aa28.12■■■□□ 2.09
CCDC84-203ENST00000526463 PLEKHG2Q9H7P9 1386 aa28.11■■■□□ 2.09
CCDC84-203ENST00000526463 MTHFSP49914 203 aa28.11■■■□□ 2.09
CCDC84-203ENST00000526463 SYTL4Q96C24 671 aaPredicted RBP28.1■■■□□ 2.09
CCDC84-203ENST00000526463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.1■■■□□ 2.092e-6■■□□□ 12.4
CCDC84-203ENST00000526463 ITGB4P16144 1822 aa28.1■■■□□ 2.09
CCDC84-203ENST00000526463 CYP27B1O15528 508 aa28.09■■■□□ 2.09
CCDC84-203ENST00000526463 PRIM1P49642 420 aaKnown RBP28.09■■■□□ 2.09
CCDC84-203ENST00000526463 CNGB1Q14028 1251 aaPredicted RBP28.09■■■□□ 2.09
CCDC84-203ENST00000526463 TXNRD1Q16881 649 aa28.09■■■□□ 2.09
CCDC84-203ENST00000526463 PROM2Q8N271 834 aa28.09■■■□□ 2.09
CCDC84-203ENST00000526463 TOGARAM1Q9Y4F4 1720 aa28.09■■■□□ 2.09
CCDC84-203ENST00000526463 IL13P35225 146 aa28.06■■■□□ 2.08
CCDC84-203ENST00000526463 LRP5O75197 1615 aa28.06■■■□□ 2.08
CCDC84-203ENST00000526463 LY75O60449 1722 aa28.06■■■□□ 2.08
CCDC84-203ENST00000526463 KDRP35968 1356 aa28.02■■■□□ 2.08
CCDC84-203ENST00000526463 PAPPAQ13219 1627 aa28.01■■■□□ 2.07
CCDC84-203ENST00000526463 NKX1-1Q15270 411 aaPredicted RBP28.01■■■□□ 2.07
CCDC84-203ENST00000526463 AEBP1Q8IUX7 1158 aa28.01■■■□□ 2.07
CCDC84-203ENST00000526463 IFNL2Q8IZJ0 200 aa28.01■■■□□ 2.07
CCDC84-203ENST00000526463 SULT6B1Q6IMI4 303 aa28■■■□□ 2.07
CCDC84-203ENST00000526463 ANO8Q9HCE9 1232 aaPredicted RBP28■■■□□ 2.07
CCDC84-203ENST00000526463 DIAPH1O60610 1272 aaKnown RBP27.99■■■□□ 2.07
CCDC84-203ENST00000526463 PHKG2P15735 406 aa27.99■■■□□ 2.07
CCDC84-203ENST00000526463 PLEKHO1Q53GL0 409 aaPredicted RBP27.99■■■□□ 2.07
CCDC84-203ENST00000526463 COL3A1P02461 1466 aaPredicted RBP27.99■■■□□ 2.07
CCDC84-203ENST00000526463 SRCAPQ6ZRS2 3230 aa27.98■■■□□ 2.07
CCDC84-203ENST00000526463 AMOTQ4VCS5 1084 aa27.97■■■□□ 2.07
CCDC84-203ENST00000526463 SLC27A3Q5K4L6 730 aa27.97■■■□□ 2.07
CCDC84-203ENST00000526463 STK32BQ9NY57 414 aa27.97■■■□□ 2.07
CCDC84-203ENST00000526463 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
CCDC84-203ENST00000526463 CASZ1Q86V15 1759 aa27.96■■■□□ 2.07
CCDC84-203ENST00000526463 MPRIPQ6WCQ1 1025 aa27.95■■■□□ 2.06
CCDC84-203ENST00000526463 SLC15A2Q16348 729 aa27.93■■■□□ 2.06
CCDC84-203ENST00000526463 ZNF530Q6P9A1 599 aaPredicted RBP27.93■■■□□ 2.06
CCDC84-203ENST00000526463 LRRC4BQ9NT99 713 aa27.93■■■□□ 2.06
CCDC84-203ENST00000526463 HSP90AB1P08238 724 aaKnown RBP27.92■■■□□ 2.06
CCDC84-203ENST00000526463 VIRMAQ69YN4 1812 aaKnown RBP27.91■■■□□ 2.06
CCDC84-203ENST00000526463 CFAP53Q96M91 514 aa27.91■■■□□ 2.06
CCDC84-203ENST00000526463 QSER1Q2KHR3 1735 aa27.91■■■□□ 2.06
CCDC84-203ENST00000526463 TAF1LQ8IZX4 1826 aa27.9■■■□□ 2.06
CCDC84-203ENST00000526463 HMOX1P09601 288 aa27.9■■■□□ 2.06
CCDC84-203ENST00000526463 PPP2R1AP30153 589 aa27.9■■■□□ 2.06
CCDC84-203ENST00000526463 C5P01031 1676 aa27.89■■■□□ 2.06
CCDC84-203ENST00000526463 C1orf141Q5JVX7 400 aa27.89■■■□□ 2.06
CCDC84-203ENST00000526463 TMOD3Q9NYL9 352 aa27.89■■■□□ 2.06
CCDC84-203ENST00000526463 CCNL1Q9UK58 526 aaPredicted RBP27.89■■■□□ 2.06
CCDC84-203ENST00000526463 SCN11AQ9UI33 1791 aa27.88■■■□□ 2.05
CCDC84-203ENST00000526463 PALLDQ8WX93 1383 aa27.88■■■□□ 2.05
CCDC84-203ENST00000526463 TUBGCP6Q96RT7 1819 aa27.88■■■□□ 2.05
CCDC84-203ENST00000526463 PIGBQ92521 554 aa27.88■■■□□ 2.05
CCDC84-203ENST00000526463 SMARCC1Q92922 1105 aaPredicted RBP27.88■■■□□ 2.05
CCDC84-203ENST00000526463 DCAF5Q96JK2 942 aa27.88■■■□□ 2.05
CCDC84-203ENST00000526463 U2SURPO15042 1029 aaKnown RBP27.86■■■□□ 2.05
CCDC84-203ENST00000526463 KDM6AO15550 1401 aaPredicted RBP27.85■■■□□ 2.05
CCDC84-203ENST00000526463 KCNQ4P56696 695 aa27.85■■■□□ 2.05
CCDC84-203ENST00000526463 ERVV-2B6SEH9 535 aa27.84■■■□□ 2.05
CCDC84-203ENST00000526463 ZNF827Q17R98 1081 aa27.84■■■□□ 2.05
CCDC84-203ENST00000526463 AKT1S1Q96B36 256 aa27.83■■■□□ 2.05
CCDC84-203ENST00000526463 HMGB2P26583 209 aaKnown RBP27.82■■■□□ 2.04
CCDC84-203ENST00000526463 DDX10Q13206 875 aaKnown RBP27.82■■■□□ 2.04
CCDC84-203ENST00000526463 SPON1Q9HCB6 807 aa27.82■■■□□ 2.04
CCDC84-203ENST00000526463 PDGFDQ9GZP0 370 aaPredicted RBP27.81■■■□□ 2.04
CCDC84-203ENST00000526463 NUDCQ9Y266 331 aa27.81■■■□□ 2.04
CCDC84-203ENST00000526463 AKAP4Q5JQC9 854 aa27.8■■■□□ 2.04
CCDC84-203ENST00000526463 ASAP1Q9ULH1 1129 aa27.78■■■□□ 2.04
CCDC84-203ENST00000526463 CABP4P57796 275 aa27.77■■■□□ 2.04
CCDC84-203ENST00000526463 TFCP2L1Q9NZI6 479 aa27.77■■■□□ 2.04
CCDC84-203ENST00000526463 C4BP0C0L5 1744 aa27.77■■■□□ 2.04
CCDC84-203ENST00000526463 ZNF831Q5JPB2 1677 aa27.76■■■□□ 2.03
CCDC84-203ENST00000526463 ADAMTS7Q9UKP4 1686 aa27.76■■■□□ 2.03
CCDC84-203ENST00000526463 MTHFSDQ2M296 383 aaKnown RBP27.76■■■□□ 2.03
CCDC84-203ENST00000526463 ATG3Q9NT62 314 aa27.76■■■□□ 2.03
CCDC84-203ENST00000526463 LOC102724428A0A0B4J2F2 783 aa27.75■■■□□ 2.03
CCDC84-203ENST00000526463 ZBTB7AO95365 584 aa27.75■■■□□ 2.03
CCDC84-203ENST00000526463 SIK1P57059 783 aa27.75■■■□□ 2.03
CCDC84-203ENST00000526463 PNPLA7Q6ZV29 1317 aa27.73■■■□□ 2.03
CCDC84-203ENST00000526463 MRC1P22897 1456 aa27.73■■■□□ 2.03
CCDC84-203ENST00000526463 RALBP1Q15311 655 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms