RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
USP35-201ENST00000526425 EIF2S2P20042 333 aaKnown RBP12.23□□□□□ -0.45
USP35-201ENST00000526425 TECPR2O15040 1411 aa12.23□□□□□ -0.45
USP35-201ENST00000526425 ZBTB9Q96C00 473 aa12.23□□□□□ -0.45
USP35-201ENST00000526425 CGNQ9P2M7 1197 aaKnown RBP12.23□□□□□ -0.45
USP35-201ENST00000526425 A0A0G2JS52 829 aa12.23□□□□□ -0.45
USP35-201ENST00000526425 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
USP35-201ENST00000526425 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
USP35-201ENST00000526425 C3P01024 1663 aa12.22□□□□□ -0.45
USP35-201ENST00000526425 MBIPQ9NS73 344 aa12.22□□□□□ -0.45
USP35-201ENST00000526425 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
USP35-201ENST00000526425 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
USP35-201ENST00000526425 CEP170BQ9Y4F5 1589 aaPredicted RBP12.21□□□□□ -0.45
USP35-201ENST00000526425 SEC24BO95487 1268 aa12.21□□□□□ -0.45
USP35-201ENST00000526425 TPM2P07951 284 aa12.21□□□□□ -0.45
USP35-201ENST00000526425 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.45
USP35-201ENST00000526425 PTPRUQ92729 1446 aa12.21□□□□□ -0.45
USP35-201ENST00000526425 UBR1Q8IWV7 1749 aa12.21□□□□□ -0.45
USP35-201ENST00000526425 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
USP35-201ENST00000526425 MYOM1P52179 1685 aa12.21□□□□□ -0.45
USP35-201ENST00000526425 XRCC6P12956 609 aaKnown RBP eCLIP12.21□□□□□ -0.46
USP35-201ENST00000526425 C8orf58Q8NAV2 365 aa12.21□□□□□ -0.46
USP35-201ENST00000526425 STK31Q9BXU1 1019 aa12.21□□□□□ -0.46
USP35-201ENST00000526425 KDM2BQ8NHM5 1336 aa12.2□□□□□ -0.46
USP35-201ENST00000526425 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
USP35-201ENST00000526425 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
USP35-201ENST00000526425 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
USP35-201ENST00000526425 SLIT1O75093 1534 aa12.19□□□□□ -0.46
USP35-201ENST00000526425 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
USP35-201ENST00000526425 CBX1P83916 185 aa12.19□□□□□ -0.46
USP35-201ENST00000526425 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
USP35-201ENST00000526425 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
USP35-201ENST00000526425 CSB-PGBD3P0DP91 1061 aa12.18□□□□□ -0.46
USP35-201ENST00000526425 FKBP5Q13451 457 aaPredicted RBP12.18□□□□□ -0.46
USP35-201ENST00000526425 F6X3S4 739 aa12.18□□□□□ -0.46
USP35-201ENST00000526425 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
USP35-201ENST00000526425 C19orf44Q9H6X5 657 aa12.18□□□□□ -0.46
USP35-201ENST00000526425 SETD1BQ9UPS6 1966 aaKnown RBP12.18□□□□□ -0.46
USP35-201ENST00000526425 PTCH1Q13635 1447 aa12.17□□□□□ -0.46
USP35-201ENST00000526425 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
USP35-201ENST00000526425 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
USP35-201ENST00000526425 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
USP35-201ENST00000526425 USP6P35125 1406 aa12.17□□□□□ -0.46
USP35-201ENST00000526425 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
USP35-201ENST00000526425 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
USP35-201ENST00000526425 API5Q9BZZ5 524 aaKnown RBP12.16□□□□□ -0.46
USP35-201ENST00000526425 IL13P35225 146 aa12.16□□□□□ -0.46
USP35-201ENST00000526425 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
USP35-201ENST00000526425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
USP35-201ENST00000526425 HSCBQ8IWL3 235 aa12.16□□□□□ -0.46
USP35-201ENST00000526425 CNPY4Q8N129 248 aa12.16□□□□□ -0.46
USP35-201ENST00000526425 CD163L1Q9NR16 1453 aa12.15□□□□□ -0.46
USP35-201ENST00000526425 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
USP35-201ENST00000526425 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
USP35-201ENST00000526425 CPS1P31327 1500 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 VAMP4O75379 141 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 ZC3H6P61129 1189 aaKnown RBP12.14□□□□□ -0.47
USP35-201ENST00000526425 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
USP35-201ENST00000526425 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
USP35-201ENST00000526425 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
USP35-201ENST00000526425 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 TMEM51Q9NW97 253 aa12.14□□□□□ -0.47
USP35-201ENST00000526425 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
USP35-201ENST00000526425 TEFQ10587 303 aa12.13□□□□□ -0.47
USP35-201ENST00000526425 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
USP35-201ENST00000526425 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
USP35-201ENST00000526425 MED14O60244 1454 aa12.13□□□□□ -0.47
USP35-201ENST00000526425 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
USP35-201ENST00000526425 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
USP35-201ENST00000526425 AATKQ6ZMQ8 1374 aa12.13□□□□□ -0.47
USP35-201ENST00000526425 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
USP35-201ENST00000526425 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
USP35-201ENST00000526425 FLT4P35916 1363 aa12.12□□□□□ -0.47
USP35-201ENST00000526425 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
USP35-201ENST00000526425 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
USP35-201ENST00000526425 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
USP35-201ENST00000526425 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
USP35-201ENST00000526425 ANXA1P04083 346 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 SMAP1Q8IYB5 467 aaPredicted RBP12.1□□□□□ -0.47
USP35-201ENST00000526425 MSH6P52701 1360 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 ANKARQ7Z5J8 1434 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
USP35-201ENST00000526425 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 RILPL2Q969X0 211 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 EYA1Q99502 592 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 TMEM94Q12767 1356 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 DIP2AQ14689 1571 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 UQCRHLA0A096LP55 91 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 UQCRHP07919 91 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
USP35-201ENST00000526425 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
USP35-201ENST00000526425 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
USP35-201ENST00000526425 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
USP35-201ENST00000526425 IL16Q14005 1332 aa12.09□□□□□ -0.47
USP35-201ENST00000526425 LRRC59Q96AG4 307 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms