RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 ANKRD36BQ8N2N9 1353 aa17.84■□□□□ 0.45
CCDC90B-205ENST00000525916 LTV1Q96GA3 475 aaPredicted RBP17.84■□□□□ 0.45
CCDC90B-205ENST00000525916 ATP10DQ9P241 1426 aa17.83■□□□□ 0.45
CCDC90B-205ENST00000525916 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
CCDC90B-205ENST00000525916 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
CCDC90B-205ENST00000525916 A0A1W2PP64 1363 aa17.81■□□□□ 0.44
CCDC90B-205ENST00000525916 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
CCDC90B-205ENST00000525916 HDGFL2Q7Z4V5 671 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-205ENST00000525916 IP6K1Q92551 441 aa17.81■□□□□ 0.44
CCDC90B-205ENST00000525916 SIN3AQ96ST3 1273 aa17.81■□□□□ 0.44
CCDC90B-205ENST00000525916 MEGF6O75095 1541 aa17.81■□□□□ 0.44
CCDC90B-205ENST00000525916 MSH5O43196 834 aa17.8■□□□□ 0.44
CCDC90B-205ENST00000525916 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
CCDC90B-205ENST00000525916 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
CCDC90B-205ENST00000525916 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
CCDC90B-205ENST00000525916 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-205ENST00000525916 ITGB4P16144 1822 aa17.79■□□□□ 0.44
CCDC90B-205ENST00000525916 TOGARAM1Q9Y4F4 1720 aa17.77■□□□□ 0.44
CCDC90B-205ENST00000525916 UBR3Q6ZT12 1888 aa17.77■□□□□ 0.43
CCDC90B-205ENST00000525916 NEUROD1Q13562 356 aa17.76■□□□□ 0.43
CCDC90B-205ENST00000525916 ZCRB1Q8TBF4 217 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-205ENST00000525916 USP47Q96K76 1375 aa17.76■□□□□ 0.43
CCDC90B-205ENST00000525916 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
CCDC90B-205ENST00000525916 HOXC9P31274 260 aa17.75■□□□□ 0.43
CCDC90B-205ENST00000525916 TERF2IPQ9NYB0 399 aa17.75■□□□□ 0.43
CCDC90B-205ENST00000525916 ADCY9O60503 1353 aa17.75■□□□□ 0.43
CCDC90B-205ENST00000525916 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
CCDC90B-205ENST00000525916 GPBP1L1Q9HC44 474 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-205ENST00000525916 FBLN1P23142 703 aa17.73■□□□□ 0.43
CCDC90B-205ENST00000525916 ZNF526Q8TF50 670 aaPredicted RBP17.73■□□□□ 0.43
CCDC90B-205ENST00000525916 AMPHP49418 695 aa17.72■□□□□ 0.43
CCDC90B-205ENST00000525916 CARD11Q9BXL7 1154 aa17.72■□□□□ 0.43
CCDC90B-205ENST00000525916 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-205ENST00000525916 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
CCDC90B-205ENST00000525916 HSPA6P17066 643 aa17.7■□□□□ 0.42
CCDC90B-205ENST00000525916 USHBP1Q8N6Y0 703 aa17.7■□□□□ 0.42
CCDC90B-205ENST00000525916 COG3Q96JB2 828 aa17.7■□□□□ 0.42
CCDC90B-205ENST00000525916 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
CCDC90B-205ENST00000525916 WWC3Q9ULE0 1092 aa17.69■□□□□ 0.42
CCDC90B-205ENST00000525916 MAP2P11137 1827 aaKnown RBP17.69■□□□□ 0.42
CCDC90B-205ENST00000525916 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
CCDC90B-205ENST00000525916 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
CCDC90B-205ENST00000525916 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
CCDC90B-205ENST00000525916 PKD1L3Q7Z443 1732 aa17.68■□□□□ 0.42
CCDC90B-205ENST00000525916 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
CCDC90B-205ENST00000525916 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
CCDC90B-205ENST00000525916 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-205ENST00000525916 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
CCDC90B-205ENST00000525916 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
CCDC90B-205ENST00000525916 IGSF1Q8N6C5 1336 aa17.66■□□□□ 0.42
CCDC90B-205ENST00000525916 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
CCDC90B-205ENST00000525916 KIAA1551Q9HCM1 1747 aa17.65■□□□□ 0.42
CCDC90B-205ENST00000525916 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
CCDC90B-205ENST00000525916 CGNL1Q0VF96 1302 aa17.65■□□□□ 0.42
CCDC90B-205ENST00000525916 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
CCDC90B-205ENST00000525916 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
CCDC90B-205ENST00000525916 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
CCDC90B-205ENST00000525916 PUS7Q96PZ0 661 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-205ENST00000525916 PCDH11XQ9BZA7 1347 aa17.64■□□□□ 0.41
CCDC90B-205ENST00000525916 PCDH11YQ9BZA8 1340 aa17.64■□□□□ 0.41
CCDC90B-205ENST00000525916 PHF14O94880 888 aa17.63■□□□□ 0.41
CCDC90B-205ENST00000525916 MPRIPQ6WCQ1 1025 aa17.63■□□□□ 0.41
CCDC90B-205ENST00000525916 AK7Q96M32 723 aa17.63■□□□□ 0.41
CCDC90B-205ENST00000525916 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-205ENST00000525916 KIF3CO14782 793 aa17.61■□□□□ 0.41
CCDC90B-205ENST00000525916 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
CCDC90B-205ENST00000525916 NSD3Q9BZ95 1437 aa17.6■□□□□ 0.41
CCDC90B-205ENST00000525916 WDR90Q96KV7 1748 aa17.59■□□□□ 0.41
CCDC90B-205ENST00000525916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
CCDC90B-205ENST00000525916 CYP27B1O15528 508 aa17.59■□□□□ 0.41
CCDC90B-205ENST00000525916 TESK2Q96S53 571 aa17.59■□□□□ 0.41
CCDC90B-205ENST00000525916 GGNBP2Q9H3C7 697 aa17.59■□□□□ 0.41
CCDC90B-205ENST00000525916 HMGB2P26583 209 aaKnown RBP17.58■□□□□ 0.4
CCDC90B-205ENST00000525916 INSRP06213 1382 aa17.57■□□□□ 0.4
CCDC90B-205ENST00000525916 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
CCDC90B-205ENST00000525916 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-205ENST00000525916 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
CCDC90B-205ENST00000525916 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
CCDC90B-205ENST00000525916 FYB1O15117 783 aa17.56■□□□□ 0.4
CCDC90B-205ENST00000525916 LINC00116Q8NCU8 138 aa17.56■□□□□ 0.4
CCDC90B-205ENST00000525916 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
CCDC90B-205ENST00000525916 FLT4P35916 1363 aa17.55■□□□□ 0.4
CCDC90B-205ENST00000525916 SSFA2P28290 1259 aa17.55■□□□□ 0.4
CCDC90B-205ENST00000525916 PIGBQ92521 554 aa17.55■□□□□ 0.4
CCDC90B-205ENST00000525916 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
CCDC90B-205ENST00000525916 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
CCDC90B-205ENST00000525916 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
CCDC90B-205ENST00000525916 LOC102724428A0A0B4J2F2 783 aa17.53■□□□□ 0.4
CCDC90B-205ENST00000525916 APLP1P51693 650 aa17.53■□□□□ 0.4
CCDC90B-205ENST00000525916 SIK1P57059 783 aa17.53■□□□□ 0.4
CCDC90B-205ENST00000525916 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
CCDC90B-205ENST00000525916 GNPATO15228 680 aa17.52■□□□□ 0.4
CCDC90B-205ENST00000525916 NCAPD2Q15021 1401 aa17.52■□□□□ 0.4
CCDC90B-205ENST00000525916 ITPK1Q13572 414 aa17.51■□□□□ 0.39
CCDC90B-205ENST00000525916 KIF24Q5T7B8 1368 aa17.51■□□□□ 0.39
CCDC90B-205ENST00000525916 MMP10P09238 476 aa17.5■□□□□ 0.39
CCDC90B-205ENST00000525916 MYH14Q7Z406 1995 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-205ENST00000525916 ZNF831Q5JPB2 1677 aa17.49■□□□□ 0.39
CCDC90B-205ENST00000525916 TOMM70O94826 608 aa17.49■□□□□ 0.39
CCDC90B-205ENST00000525916 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms