RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 SULT6B1Q6IMI4 303 aa8.44□□□□□ -1.06
ATPAF1-207ENST00000525633 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
ATPAF1-207ENST00000525633 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
ATPAF1-207ENST00000525633 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
ATPAF1-207ENST00000525633 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
ATPAF1-207ENST00000525633 NLRP2Q9NX02 1062 aa8.44□□□□□ -1.06
ATPAF1-207ENST00000525633 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
ATPAF1-207ENST00000525633 APBA3O96018 575 aa8.43□□□□□ -1.06
ATPAF1-207ENST00000525633 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATPAF1-207ENST00000525633 EZH2Q15910 746 aaKnown RBP8.43□□□□□ -1.06
ATPAF1-207ENST00000525633 RUNDC1Q96C34 613 aa8.43□□□□□ -1.06
ATPAF1-207ENST00000525633 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
ATPAF1-207ENST00000525633 FCHSD2O94868 740 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 PRKAR2BP31323 418 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 R3HDM1Q15032 1099 aaKnown RBP8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 TOM1L2Q6ZVM7 507 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 PNNQ9H307 717 aaKnown RBP8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 ERBB3P21860 1342 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 IGSF1Q8N6C5 1336 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 MAPK8IP3Q9UPT6 1336 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 WNK3Q9BYP7 1800 aa8.42□□□□□ -1.06
ATPAF1-207ENST00000525633 WDR17Q8IZU2 1322 aa8.41□□□□□ -1.06
ATPAF1-207ENST00000525633 APAF1O14727 1248 aa8.41□□□□□ -1.06
ATPAF1-207ENST00000525633 NEFMP07197 916 aa8.41□□□□□ -1.06
ATPAF1-207ENST00000525633 PARP4Q9UKK3 1724 aaKnown RBP8.4□□□□□ -1.06
ATPAF1-207ENST00000525633 DISP2A7MBM2 1401 aa8.4□□□□□ -1.06
ATPAF1-207ENST00000525633 NEUROD2Q15784 382 aa8.4□□□□□ -1.06
ATPAF1-207ENST00000525633 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.06
ATPAF1-207ENST00000525633 PLEKHF1Q96S99 279 aa8.4□□□□□ -1.06
ATPAF1-207ENST00000525633 RRP7AQ9Y3A4 280 aaKnown RBP8.4□□□□□ -1.06
ATPAF1-207ENST00000525633 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
ATPAF1-207ENST00000525633 CRB1P82279 1406 aa8.38□□□□□ -1.07
ATPAF1-207ENST00000525633 KDRP35968 1356 aa8.38□□□□□ -1.07
ATPAF1-207ENST00000525633 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
ATPAF1-207ENST00000525633 RAPGEF4Q8WZA2 1011 aa8.38□□□□□ -1.07
ATPAF1-207ENST00000525633 NCAPD2Q15021 1401 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 PKD1L3Q7Z443 1732 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 TMPOP42166 694 aaKnown RBP8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 RIPK4P57078 832 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 NFE2L2Q16236 605 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 DDB1Q16531 1140 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 PLEKHO1Q53GL0 409 aaPredicted RBP8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 SCN11AQ9UI33 1791 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 SHANK3Q9BYB0 1731 aa8.37□□□□□ -1.07
ATPAF1-207ENST00000525633 MEGF6O75095 1541 aa8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 PLSCR1O15162 318 aa8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 MTHFSDQ2M296 383 aaKnown RBP8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 ZNF530Q6P9A1 599 aaPredicted RBP8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 MARCH10Q8NA82 808 aaPredicted RBP8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 BCL11BQ9C0K0 894 aaPredicted RBP8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 THSD7AQ9UPZ6 1657 aa8.36□□□□□ -1.07
ATPAF1-207ENST00000525633 ZBED9Q6R2W3 1325 aa8.35□□□□□ -1.07
ATPAF1-207ENST00000525633 IL2RBP14784 551 aa8.35□□□□□ -1.07
ATPAF1-207ENST00000525633 PTF1AQ7RTS3 328 aa8.35□□□□□ -1.07
ATPAF1-207ENST00000525633 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
ATPAF1-207ENST00000525633 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
ATPAF1-207ENST00000525633 BRWD3Q6RI45 1802 aa8.35□□□□□ -1.07
ATPAF1-207ENST00000525633 ITGB4P16144 1822 aa8.34□□□□□ -1.07
ATPAF1-207ENST00000525633 EXOC5O00471 708 aa8.34□□□□□ -1.07
ATPAF1-207ENST00000525633 AMOTQ4VCS5 1084 aa8.34□□□□□ -1.07
ATPAF1-207ENST00000525633 PROM2Q8N271 834 aa8.34□□□□□ -1.07
ATPAF1-207ENST00000525633 ZCRB1Q8TBF4 217 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-207ENST00000525633 TRIM35Q9UPQ4 493 aa8.34□□□□□ -1.07
ATPAF1-207ENST00000525633 OVOS2A0A0G2JMS6 1433 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 LMOD3Q0VAK6 560 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 DCTN1Q14203 1278 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 C1orf141Q5JVX7 400 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 NGEFQ8N5V2 710 aa8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 THUMPD2Q9BTF0 503 aaKnown RBP8.33□□□□□ -1.08
ATPAF1-207ENST00000525633 KCNQ2O43526 872 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 AKAP4Q5JQC9 854 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 MPRIPQ6WCQ1 1025 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 MCM10Q7L590 875 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 CDCA7LQ96GN5 454 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 SIPA1L3O60292 1781 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 MAP3K5Q99683 1374 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
ATPAF1-207ENST00000525633 BCL9O00512 1426 aa8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 NCBP3Q53F19 620 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 WDR63Q8IWG1 891 aa8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 IFNL2Q8IZJ0 200 aa8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 SPON1Q9HCB6 807 aa8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 LAS1LQ9Y4W2 734 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-207ENST00000525633 ZNF521Q96K83 1311 aa8.3□□□□□ -1.08
ATPAF1-207ENST00000525633 PCDH11XQ9BZA7 1347 aa8.3□□□□□ -1.08
ATPAF1-207ENST00000525633 PCDH11YQ9BZA8 1340 aa8.3□□□□□ -1.08
ATPAF1-207ENST00000525633 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms