RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PROM2Q8N271 834 aa25.53■■□□□ 1.68
CAPN1-203ENST00000525013 RAPGEF4Q8WZA2 1011 aa25.53■■□□□ 1.68
CAPN1-203ENST00000525013 TXNRD1Q16881 649 aa25.52■■□□□ 1.68
CAPN1-203ENST00000525013 ANKRD26Q9UPS8 1709 aa25.51■■□□□ 1.68
CAPN1-203ENST00000525013 BTAF1O14981 1849 aa25.51■■□□□ 1.67
CAPN1-203ENST00000525013 TATP17735 454 aaPredicted RBP25.49■■□□□ 1.67
CAPN1-203ENST00000525013 SHANK3Q9BYB0 1731 aa25.49■■□□□ 1.67
CAPN1-203ENST00000525013 SYTL4Q96C24 671 aaPredicted RBP25.48■■□□□ 1.67
CAPN1-203ENST00000525013 ANO8Q9HCE9 1232 aaPredicted RBP25.48■■□□□ 1.67
CAPN1-203ENST00000525013 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
CAPN1-203ENST00000525013 WASHC2AQ641Q2 1341 aa25.46■■□□□ 1.67
CAPN1-203ENST00000525013 PRIM1P49642 420 aaKnown RBP25.45■■□□□ 1.66
CAPN1-203ENST00000525013 KNSTRNQ9Y448 316 aa25.45■■□□□ 1.66
CAPN1-203ENST00000525013 KIF7Q2M1P5 1343 aa25.44■■□□□ 1.66
CAPN1-203ENST00000525013 DOT1LQ8TEK3 1739 aa25.44■■□□□ 1.66
CAPN1-203ENST00000525013 STK32BQ9NY57 414 aa25.44■■□□□ 1.66
CAPN1-203ENST00000525013 NSD2O96028 1365 aa25.43■■□□□ 1.66
CAPN1-203ENST00000525013 MORC1Q86VD1 984 aa25.42■■□□□ 1.66
CAPN1-203ENST00000525013 PCDH11XQ9BZA7 1347 aa25.39■■□□□ 1.66
CAPN1-203ENST00000525013 PCDH11YQ9BZA8 1340 aa25.39■■□□□ 1.66
CAPN1-203ENST00000525013 EYA1Q99502 592 aa25.39■■□□□ 1.66
CAPN1-203ENST00000525013 SPON1Q9HCB6 807 aa25.39■■□□□ 1.66
CAPN1-203ENST00000525013 SLC15A2Q16348 729 aa25.38■■□□□ 1.65
CAPN1-203ENST00000525013 EIF4A2Q14240 407 aaKnown RBP25.37■■□□□ 1.65
CAPN1-203ENST00000525013 PDGFDQ9GZP0 370 aaPredicted RBP25.36■■□□□ 1.65
CAPN1-203ENST00000525013 LRRC4BQ9NT99 713 aa25.35■■□□□ 1.65
CAPN1-203ENST00000525013 CASZ1Q86V15 1759 aa25.35■■□□□ 1.65
CAPN1-203ENST00000525013 NCAPD2Q15021 1401 aa25.35■■□□□ 1.65
CAPN1-203ENST00000525013 CYP27B1O15528 508 aa25.34■■□□□ 1.65
CAPN1-203ENST00000525013 PPP1R1BQ9UD71 204 aaPredicted RBP25.34■■□□□ 1.65
CAPN1-203ENST00000525013 SPG7Q9UQ90 795 aa25.34■■□□□ 1.65
CAPN1-203ENST00000525013 PKD1L3Q7Z443 1732 aa25.34■■□□□ 1.65
CAPN1-203ENST00000525013 SLC27A3Q5K4L6 730 aa25.33■■□□□ 1.65
CAPN1-203ENST00000525013 ZBTB7AO95365 584 aa25.32■■□□□ 1.64
CAPN1-203ENST00000525013 KCNQ4P56696 695 aa25.31■■□□□ 1.64
CAPN1-203ENST00000525013 AMER1Q5JTC6 1135 aaPredicted RBP25.31■■□□□ 1.64
CAPN1-203ENST00000525013 PAPPAQ13219 1627 aa25.3■■□□□ 1.64
CAPN1-203ENST00000525013 LY75O60449 1722 aa25.3■■□□□ 1.64
CAPN1-203ENST00000525013 ZNF827Q17R98 1081 aa25.29■■□□□ 1.64
CAPN1-203ENST00000525013 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
CAPN1-203ENST00000525013 ATF5Q9Y2D1 282 aaPredicted RBP25.29■■□□□ 1.64
CAPN1-203ENST00000525013 ITGB4P16144 1822 aa25.28■■□□□ 1.64
CAPN1-203ENST00000525013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.28■■□□□ 1.64
CAPN1-203ENST00000525013 CCNL1Q9UK58 526 aaPredicted RBP25.27■■□□□ 1.64
CAPN1-203ENST00000525013 IGSF1Q8N6C5 1336 aa25.26■■□□□ 1.63
CAPN1-203ENST00000525013 TOGARAM1Q9Y4F4 1720 aa25.26■■□□□ 1.63
CAPN1-203ENST00000525013 CC2D1BQ5T0F9 858 aaKnown RBP25.25■■□□□ 1.63
CAPN1-203ENST00000525013 PER1O15534 1290 aaPredicted RBP25.24■■□□□ 1.63
CAPN1-203ENST00000525013 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
CAPN1-203ENST00000525013 IFNL2Q8IZJ0 200 aa25.24■■□□□ 1.63
CAPN1-203ENST00000525013 AKT1S1Q96B36 256 aa25.24■■□□□ 1.63
CAPN1-203ENST00000525013 CNGB1Q14028 1251 aaPredicted RBP25.23■■□□□ 1.63
CAPN1-203ENST00000525013 MTFR1LQ9H019 292 aa25.23■■□□□ 1.63
CAPN1-203ENST00000525013 TFCP2L1Q9NZI6 479 aa25.23■■□□□ 1.63
CAPN1-203ENST00000525013 PHKG2P15735 406 aa25.22■■□□□ 1.63
CAPN1-203ENST00000525013 PALLDQ8WX93 1383 aa25.2■■□□□ 1.63
CAPN1-203ENST00000525013 PTGER2P43116 358 aa25.2■■□□□ 1.62
CAPN1-203ENST00000525013 MTHFSP49914 203 aa25.2■■□□□ 1.62
CAPN1-203ENST00000525013 PLEKHO1Q53GL0 409 aaPredicted RBP25.2■■□□□ 1.62
CAPN1-203ENST00000525013 AEBP1Q8IUX7 1158 aa25.2■■□□□ 1.62
CAPN1-203ENST00000525013 PIGBQ92521 554 aa25.2■■□□□ 1.62
CAPN1-203ENST00000525013 SMARCC1Q92922 1105 aaPredicted RBP25.19■■□□□ 1.62
CAPN1-203ENST00000525013 TUBGCP6Q96RT7 1819 aa25.19■■□□□ 1.62
CAPN1-203ENST00000525013 QSER1Q2KHR3 1735 aa25.18■■□□□ 1.62
CAPN1-203ENST00000525013 SULT6B1Q6IMI4 303 aa25.18■■□□□ 1.62
CAPN1-203ENST00000525013 TMOD3Q9NYL9 352 aa25.18■■□□□ 1.62
CAPN1-203ENST00000525013 PLEKHG2Q9H7P9 1386 aa25.18■■□□□ 1.62
CAPN1-203ENST00000525013 IL13P35225 146 aa25.17■■□□□ 1.62
CAPN1-203ENST00000525013 PNPLA7Q6ZV29 1317 aa25.16■■□□□ 1.62
CAPN1-203ENST00000525013 ZNF530Q6P9A1 599 aaPredicted RBP25.16■■□□□ 1.62
CAPN1-203ENST00000525013 AMOTQ4VCS5 1084 aa25.15■■□□□ 1.62
CAPN1-203ENST00000525013 C5P01031 1676 aa25.15■■□□□ 1.62
CAPN1-203ENST00000525013 TAF1LQ8IZX4 1826 aa25.14■■□□□ 1.62
CAPN1-203ENST00000525013 MSH5O43196 834 aa25.14■■□□□ 1.62
CAPN1-203ENST00000525013 HMGB2P26583 209 aaKnown RBP25.14■■□□□ 1.62
CAPN1-203ENST00000525013 SLC16A10Q8TF71 515 aa25.14■■□□□ 1.62
CAPN1-203ENST00000525013 HSP90AB1P08238 724 aaKnown RBP25.13■■□□□ 1.61
CAPN1-203ENST00000525013 SGIP1Q9BQI5 828 aa25.12■■□□□ 1.61
CAPN1-203ENST00000525013 ASAP1Q9ULH1 1129 aa25.12■■□□□ 1.61
CAPN1-203ENST00000525013 NPC1L1Q9UHC9 1359 aa25.12■■□□□ 1.61
CAPN1-203ENST00000525013 C1orf141Q5JVX7 400 aa25.11■■□□□ 1.61
CAPN1-203ENST00000525013 DCAF5Q96JK2 942 aa25.11■■□□□ 1.61
CAPN1-203ENST00000525013 KDRP35968 1356 aa25.1■■□□□ 1.61
CAPN1-203ENST00000525013 DCAF8L1A6NGE4 600 aa25.1■■□□□ 1.61
CAPN1-203ENST00000525013 ARXQ96QS3 562 aa25.1■■□□□ 1.61
CAPN1-203ENST00000525013 ERVV-2B6SEH9 535 aa25.09■■□□□ 1.61
CAPN1-203ENST00000525013 DIAPH1O60610 1272 aaKnown RBP25.09■■□□□ 1.61
CAPN1-203ENST00000525013 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
CAPN1-203ENST00000525013 LOC102724428A0A0B4J2F2 783 aa25.08■■□□□ 1.61
CAPN1-203ENST00000525013 HMOX1P09601 288 aa25.08■■□□□ 1.61
CAPN1-203ENST00000525013 SIK1P57059 783 aa25.08■■□□□ 1.61
CAPN1-203ENST00000525013 COL23A1Q86Y22 540 aaPredicted RBP25.08■■□□□ 1.61
CAPN1-203ENST00000525013 POLD1P28340 1107 aa25.07■■□□□ 1.6
CAPN1-203ENST00000525013 ATG3Q9NT62 314 aa25.07■■□□□ 1.6
CAPN1-203ENST00000525013 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
CAPN1-203ENST00000525013 CABP4P57796 275 aa25.06■■□□□ 1.6
CAPN1-203ENST00000525013 AK7Q96M32 723 aa25.06■■□□□ 1.6
CAPN1-203ENST00000525013 SYT17Q9BSW7 474 aa25.05■■□□□ 1.6
CAPN1-203ENST00000525013 KDM6AO15550 1401 aaPredicted RBP25.04■■□□□ 1.6
CAPN1-203ENST00000525013 ATP6V1AP38606 617 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 272.7 ms