RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 DCTPP1Q9H773 170 aa10.33□□□□□ -0.76
CHD7-202ENST00000524602 HSP90AB1P08238 724 aaKnown RBP10.33□□□□□ -0.76
CHD7-202ENST00000524602 RRS1Q15050 365 aaKnown RBP10.33□□□□□ -0.76
CHD7-202ENST00000524602 KIF2CQ99661 725 aa10.33□□□□□ -0.76
CHD7-202ENST00000524602 TTC21BQ7Z4L5 1316 aa10.33□□□□□ -0.76
CHD7-202ENST00000524602 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
CHD7-202ENST00000524602 RPAP2Q8IXW5 612 aaPredicted RBP10.32□□□□□ -0.76
CHD7-202ENST00000524602 GBP4Q96PP9 640 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 USP31Q70CQ4 1352 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 CHL1O00533 1208 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 RGS12O14924 1447 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 PLEKHG3A1L390 1219 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 SKOR2Q2VWA4 1001 aaPredicted RBP10.32□□□□□ -0.76
CHD7-202ENST00000524602 THEMISQ8N1K5 641 aaPredicted RBP10.32□□□□□ -0.76
CHD7-202ENST00000524602 PODXL2Q9NZ53 605 aa10.32□□□□□ -0.76
CHD7-202ENST00000524602 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
CHD7-202ENST00000524602 ELL2O00472 640 aaPredicted RBP10.31□□□□□ -0.76
CHD7-202ENST00000524602 EIF4A2Q14240 407 aaKnown RBP10.31□□□□□ -0.76
CHD7-202ENST00000524602 RAB3GAP1Q15042 981 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 ANKRD44Q8N8A2 993 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 USP6P35125 1406 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 ATP10DQ9P241 1426 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
CHD7-202ENST00000524602 ARHGEF10O15013 1369 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 PEAK1Q9H792 1746 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
CHD7-202ENST00000524602 FAM83GA6ND36 823 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 MRE11P49959 708 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 PLEKHM2Q8IWE5 1019 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 AMOTL2Q9Y2J4 779 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 NUTM2FA1L443 756 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 TTC22Q5TAA0 569 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 CLEC17AQ6ZS10 378 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 TBX22Q9Y458 520 aa10.3□□□□□ -0.76
CHD7-202ENST00000524602 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
CHD7-202ENST00000524602 RABEP1Q15276 862 aa10.29□□□□□ -0.76
CHD7-202ENST00000524602 SULT6B1Q6IMI4 303 aa10.29□□□□□ -0.76
CHD7-202ENST00000524602 TNPO1Q92973 898 aaKnown RBP10.29□□□□□ -0.76
CHD7-202ENST00000524602 CRB1P82279 1406 aa10.29□□□□□ -0.76
CHD7-202ENST00000524602 SSH2Q76I76 1423 aa10.29□□□□□ -0.76
CHD7-202ENST00000524602 TTC21AQ8NDW8 1320 aa10.29□□□□□ -0.76
CHD7-202ENST00000524602 XRCC6P12956 609 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHD7-202ENST00000524602 ACEP12821 1306 aa10.28□□□□□ -0.76
CHD7-202ENST00000524602 HSP90AA1P07900 732 aaKnown RBP10.28□□□□□ -0.76
CHD7-202ENST00000524602 GSPT1P15170 499 aaKnown RBP10.28□□□□□ -0.76
CHD7-202ENST00000524602 CASC1Q6TDU7 716 aa10.28□□□□□ -0.76
CHD7-202ENST00000524602 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
CHD7-202ENST00000524602 RGPD8O14715 1765 aaPredicted RBP10.28□□□□□ -0.76
CHD7-202ENST00000524602 XRN1Q8IZH2 1706 aaKnown RBP10.28□□□□□ -0.76
CHD7-202ENST00000524602 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
CHD7-202ENST00000524602 CEP85Q6P2H3 762 aa10.28□□□□□ -0.76
CHD7-202ENST00000524602 MSH6P52701 1360 aa10.27□□□□□ -0.77
CHD7-202ENST00000524602 HMMRO75330 724 aa10.27□□□□□ -0.77
CHD7-202ENST00000524602 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
CHD7-202ENST00000524602 ADAMTSL3P82987 1691 aa10.27□□□□□ -0.77
CHD7-202ENST00000524602 KDRP35968 1356 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 LRRC37A3O60309 1634 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 GOLGA6L22H0YM25 854 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 SBNO1A3KN83 1393 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 N4BP2Q86UW6 1770 aaPredicted RBP10.26□□□□□ -0.77
CHD7-202ENST00000524602 GLIPR1L2Q4G1C9 344 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 ZNF142P52746 1687 aaPredicted RBP10.26□□□□□ -0.77
CHD7-202ENST00000524602 FLT4P35916 1363 aa10.26□□□□□ -0.77
CHD7-202ENST00000524602 SOS1Q07889 1333 aaPredicted RBP10.26□□□□□ -0.77
CHD7-202ENST00000524602 CCT4P50991 539 aaKnown RBP10.26□□□□□ -0.77
CHD7-202ENST00000524602 GZF1Q9H116 711 aaPredicted RBP10.26□□□□□ -0.77
CHD7-202ENST00000524602 USP54Q70EL1 1684 aa10.25□□□□□ -0.77
CHD7-202ENST00000524602 HTATSF1O43719 755 aaKnown RBP10.25□□□□□ -0.77
CHD7-202ENST00000524602 USP26Q9BXU7 913 aa10.25□□□□□ -0.77
CHD7-202ENST00000524602 GRPEL1Q9HAV7 217 aa10.25□□□□□ -0.77
CHD7-202ENST00000524602 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
CHD7-202ENST00000524602 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
CHD7-202ENST00000524602 MCM10Q7L590 875 aa10.25□□□□□ -0.77
CHD7-202ENST00000524602 IBTKQ9P2D0 1353 aaPredicted RBP10.25□□□□□ -0.77
CHD7-202ENST00000524602 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
CHD7-202ENST00000524602 REC8O95072 547 aa10.24□□□□□ -0.77
CHD7-202ENST00000524602 KCNA6P17658 529 aa10.24□□□□□ -0.77
CHD7-202ENST00000524602 NUCB2P80303 420 aa10.24□□□□□ -0.77
CHD7-202ENST00000524602 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
CHD7-202ENST00000524602 RTF1Q92541 710 aaKnown RBP10.24□□□□□ -0.77
CHD7-202ENST00000524602 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
CHD7-202ENST00000524602 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
CHD7-202ENST00000524602 FAM208AQ9UK61 1670 aaKnown RBP10.24□□□□□ -0.77
CHD7-202ENST00000524602 SLC4A2P04920 1241 aa10.23□□□□□ -0.77
CHD7-202ENST00000524602 ST18O60284 1047 aa10.23□□□□□ -0.77
CHD7-202ENST00000524602 SDSP20132 328 aa10.23□□□□□ -0.77
CHD7-202ENST00000524602 MEIS3Q99687 375 aa10.23□□□□□ -0.77
CHD7-202ENST00000524602 TUBGCP6Q96RT7 1819 aa10.23□□□□□ -0.77
CHD7-202ENST00000524602 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
CHD7-202ENST00000524602 IGSF1Q8N6C5 1336 aa10.22□□□□□ -0.77
CHD7-202ENST00000524602 SETD1BQ9UPS6 1966 aaKnown RBP10.22□□□□□ -0.77
CHD7-202ENST00000524602 CHD2O14647 1828 aaKnown RBP10.22□□□□□ -0.77
CHD7-202ENST00000524602 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
CHD7-202ENST00000524602 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
CHD7-202ENST00000524602 BABAM1Q9NWV8 329 aa10.22□□□□□ -0.77
CHD7-202ENST00000524602 PIK3C2AO00443 1686 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms