RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TNNT2P45379 298 aaPredicted RBP28.48■■■□□ 2.15
TRAPPC9-215ENST00000524162 ZCRB1Q8TBF4 217 aaKnown RBP28.48■■■□□ 2.15
TRAPPC9-215ENST00000524162 PKD1L3Q7Z443 1732 aa28.46■■■□□ 2.15
TRAPPC9-215ENST00000524162 TATP17735 454 aaPredicted RBP28.46■■■□□ 2.15
TRAPPC9-215ENST00000524162 EIF4A2Q14240 407 aaKnown RBP28.44■■■□□ 2.14
TRAPPC9-215ENST00000524162 EZH2Q15910 746 aaKnown RBP28.44■■■□□ 2.14
TRAPPC9-215ENST00000524162 EYA1Q99502 592 aa28.44■■■□□ 2.14
TRAPPC9-215ENST00000524162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.43■■■□□ 2.14
TRAPPC9-215ENST00000524162 USHBP1Q8N6Y0 703 aa28.42■■■□□ 2.14
TRAPPC9-215ENST00000524162 NUP188Q5SRE5 1749 aa28.42■■■□□ 2.14
TRAPPC9-215ENST00000524162 IGSF1Q8N6C5 1336 aa28.41■■■□□ 2.14
TRAPPC9-215ENST00000524162 PCDH11XQ9BZA7 1347 aa28.4■■■□□ 2.14
TRAPPC9-215ENST00000524162 PCDH11YQ9BZA8 1340 aa28.4■■■□□ 2.14
TRAPPC9-215ENST00000524162 BTAF1O14981 1849 aa28.39■■■□□ 2.14
TRAPPC9-215ENST00000524162 DDX54Q8TDD1 881 aaKnown RBP28.39■■■□□ 2.14
TRAPPC9-215ENST00000524162 SRCAPQ6ZRS2 3230 aa28.39■■■□□ 2.13
TRAPPC9-215ENST00000524162 PTF1AQ7RTS3 328 aa28.36■■■□□ 2.13
TRAPPC9-215ENST00000524162 DOT1LQ8TEK3 1739 aa28.35■■■□□ 2.13
TRAPPC9-215ENST00000524162 KCNQ2O43526 872 aa28.35■■■□□ 2.13
TRAPPC9-215ENST00000524162 ZEB1P37275 1124 aaPredicted RBP28.35■■■□□ 2.13
TRAPPC9-215ENST00000524162 CC2D1BQ5T0F9 858 aaKnown RBP28.35■■■□□ 2.13
TRAPPC9-215ENST00000524162 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
TRAPPC9-215ENST00000524162 MTHFSP49914 203 aa28.33■■■□□ 2.13
TRAPPC9-215ENST00000524162 KDRP35968 1356 aa28.33■■■□□ 2.13
TRAPPC9-215ENST00000524162 IL13P35225 146 aa28.31■■■□□ 2.12
TRAPPC9-215ENST00000524162 NKX1-1Q15270 411 aaPredicted RBP28.31■■■□□ 2.12
TRAPPC9-215ENST00000524162 ACSBG1Q96GR2 724 aa28.31■■■□□ 2.12
TRAPPC9-215ENST00000524162 CYP27B1O15528 508 aa28.3■■■□□ 2.12
TRAPPC9-215ENST00000524162 NBPF14Q5TI25 921 aa28.3■■■□□ 2.12
TRAPPC9-215ENST00000524162 PROM2Q8N271 834 aa28.29■■■□□ 2.12
TRAPPC9-215ENST00000524162 TXNRD1Q16881 649 aa28.27■■■□□ 2.12
TRAPPC9-215ENST00000524162 ITGB4P16144 1822 aa28.26■■■□□ 2.11
TRAPPC9-215ENST00000524162 PRIM1P49642 420 aaKnown RBP28.25■■■□□ 2.11
TRAPPC9-215ENST00000524162 AMOTQ4VCS5 1084 aa28.25■■■□□ 2.11
TRAPPC9-215ENST00000524162 LY75O60449 1722 aa28.25■■■□□ 2.11
TRAPPC9-215ENST00000524162 IFNL2Q8IZJ0 200 aa28.24■■■□□ 2.11
TRAPPC9-215ENST00000524162 COL3A1P02461 1466 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC9-215ENST00000524162 TOGARAM1Q9Y4F4 1720 aa28.23■■■□□ 2.11
TRAPPC9-215ENST00000524162 LRP5O75197 1615 aa28.22■■■□□ 2.11
TRAPPC9-215ENST00000524162 DIAPH1O60610 1272 aaKnown RBP28.22■■■□□ 2.11
TRAPPC9-215ENST00000524162 PLEKHO1Q53GL0 409 aaPredicted RBP28.22■■■□□ 2.11
TRAPPC9-215ENST00000524162 R3HDM1Q15032 1099 aaKnown RBP28.21■■■□□ 2.11
TRAPPC9-215ENST00000524162 SLC27A3Q5K4L6 730 aa28.21■■■□□ 2.11
TRAPPC9-215ENST00000524162 PHKG2P15735 406 aa28.2■■■□□ 2.1
TRAPPC9-215ENST00000524162 HMGB2P26583 209 aaKnown RBP28.2■■■□□ 2.1
TRAPPC9-215ENST00000524162 SULT6B1Q6IMI4 303 aa28.2■■■□□ 2.1
TRAPPC9-215ENST00000524162 PAPPAQ13219 1627 aa28.2■■■□□ 2.1
TRAPPC9-215ENST00000524162 SYTL4Q96C24 671 aaPredicted RBP28.19■■■□□ 2.1
TRAPPC9-215ENST00000524162 PSDA5PKW4 1024 aaPredicted RBP28.18■■■□□ 2.1
TRAPPC9-215ENST00000524162 HSP90AB1P08238 724 aaKnown RBP28.18■■■□□ 2.1
TRAPPC9-215ENST00000524162 AEBP1Q8IUX7 1158 aa28.17■■■□□ 2.1
TRAPPC9-215ENST00000524162 PPP2R1AP30153 589 aa28.15■■■□□ 2.1
TRAPPC9-215ENST00000524162 CFAP53Q96M91 514 aa28.15■■■□□ 2.1
TRAPPC9-215ENST00000524162 DCAF5Q96JK2 942 aa28.14■■■□□ 2.1
TRAPPC9-215ENST00000524162 ANO8Q9HCE9 1232 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC9-215ENST00000524162 QSER1Q2KHR3 1735 aa28.12■■■□□ 2.09
TRAPPC9-215ENST00000524162 ERVV-2B6SEH9 535 aa28.12■■■□□ 2.09
TRAPPC9-215ENST00000524162 SMARCC1Q92922 1105 aaPredicted RBP28.12■■■□□ 2.09
TRAPPC9-215ENST00000524162 STK32BQ9NY57 414 aa28.12■■■□□ 2.09
TRAPPC9-215ENST00000524162 SLC15A2Q16348 729 aa28.11■■■□□ 2.09
TRAPPC9-215ENST00000524162 LRRC4BQ9NT99 713 aa28.11■■■□□ 2.09
TRAPPC9-215ENST00000524162 CASZ1Q86V15 1759 aa28.11■■■□□ 2.09
TRAPPC9-215ENST00000524162 ZNF530Q6P9A1 599 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC9-215ENST00000524162 MPRIPQ6WCQ1 1025 aa28.1■■■□□ 2.09
TRAPPC9-215ENST00000524162 SCN11AQ9UI33 1791 aa28.09■■■□□ 2.09
TRAPPC9-215ENST00000524162 C1orf141Q5JVX7 400 aa28.08■■■□□ 2.09
TRAPPC9-215ENST00000524162 PIGBQ92521 554 aa28.08■■■□□ 2.09
TRAPPC9-215ENST00000524162 TAF1LQ8IZX4 1826 aa28.08■■■□□ 2.09
TRAPPC9-215ENST00000524162 CNGB1Q14028 1251 aaPredicted RBP28.07■■■□□ 2.08
TRAPPC9-215ENST00000524162 TMOD3Q9NYL9 352 aa28.07■■■□□ 2.08
TRAPPC9-215ENST00000524162 NUDCQ9Y266 331 aa28.06■■■□□ 2.08
TRAPPC9-215ENST00000524162 PALLDQ8WX93 1383 aa28.06■■■□□ 2.08
TRAPPC9-215ENST00000524162 KDM6AO15550 1401 aaPredicted RBP28.05■■■□□ 2.08
TRAPPC9-215ENST00000524162 HMOX1P09601 288 aa28.05■■■□□ 2.08
TRAPPC9-215ENST00000524162 RALBP1Q15311 655 aa28.05■■■□□ 2.08
TRAPPC9-215ENST00000524162 ZNF831Q5JPB2 1677 aa28.05■■■□□ 2.08
TRAPPC9-215ENST00000524162 AKAP4Q5JQC9 854 aa28.05■■■□□ 2.08
TRAPPC9-215ENST00000524162 VIRMAQ69YN4 1812 aaKnown RBP28.05■■■□□ 2.08
TRAPPC9-215ENST00000524162 ADAMTS7Q9UKP4 1686 aa28.04■■■□□ 2.08
TRAPPC9-215ENST00000524162 AKT1S1Q96B36 256 aa28.04■■■□□ 2.08
TRAPPC9-215ENST00000524162 CCNL1Q9UK58 526 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC9-215ENST00000524162 C5P01031 1676 aa28.03■■■□□ 2.08
TRAPPC9-215ENST00000524162 DDX10Q13206 875 aaKnown RBP28.03■■■□□ 2.08
TRAPPC9-215ENST00000524162 U2SURPO15042 1029 aaKnown RBP28.01■■■□□ 2.07
TRAPPC9-215ENST00000524162 TUBGCP6Q96RT7 1819 aa27.98■■■□□ 2.07
TRAPPC9-215ENST00000524162 ZNF827Q17R98 1081 aa27.98■■■□□ 2.07
TRAPPC9-215ENST00000524162 SPON1Q9HCB6 807 aa27.98■■■□□ 2.07
TRAPPC9-215ENST00000524162 MRC1P22897 1456 aa27.97■■■□□ 2.07
TRAPPC9-215ENST00000524162 FCHSD2O94868 740 aa27.97■■■□□ 2.07
TRAPPC9-215ENST00000524162 MTHFSDQ2M296 383 aaKnown RBP27.97■■■□□ 2.07
TRAPPC9-215ENST00000524162 CABP4P57796 275 aa27.96■■■□□ 2.07
TRAPPC9-215ENST00000524162 GAS2L2Q8NHY3 880 aa27.96■■■□□ 2.07
TRAPPC9-215ENST00000524162 RSPH6AQ9H0K4 717 aa27.96■■■□□ 2.07
TRAPPC9-215ENST00000524162 ATG3Q9NT62 314 aa27.96■■■□□ 2.07
TRAPPC9-215ENST00000524162 LOC102724428A0A0B4J2F2 783 aa27.95■■■□□ 2.06
TRAPPC9-215ENST00000524162 SIK1P57059 783 aa27.95■■■□□ 2.06
TRAPPC9-215ENST00000524162 SLC16A10Q8TF71 515 aa27.95■■■□□ 2.06
TRAPPC9-215ENST00000524162 ASAP1Q9ULH1 1129 aa27.95■■■□□ 2.06
TRAPPC9-215ENST00000524162 COL24A1Q17RW2 1714 aa27.94■■■□□ 2.06
TRAPPC9-215ENST00000524162 C4BP0C0L5 1744 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms