RNA–Protein interactions for RNA: ENST00000523627.1

AC055854.1-201, humanhuman

TSL 4 BASIC

Gene AC055854.1, Length 570 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-201ENST00000523627 HOXC9P31274 260 aa22.54■■□□□ 1.2
AC055854.1-201ENST00000523627 PRIM1P49642 420 aaKnown RBP22.54■■□□□ 1.2
AC055854.1-201ENST00000523627 SLC16A10Q8TF71 515 aa22.54■■□□□ 1.2
AC055854.1-201ENST00000523627 NLGN2Q8NFZ4 835 aa22.51■■□□□ 1.19
AC055854.1-201ENST00000523627 C1QTNF8P60827 252 aa22.5■■□□□ 1.19
AC055854.1-201ENST00000523627 SYTL4Q96C24 671 aaPredicted RBP22.48■■□□□ 1.19
AC055854.1-201ENST00000523627 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
AC055854.1-201ENST00000523627 GPR162Q16538 588 aa22.47■■□□□ 1.19
AC055854.1-201ENST00000523627 ZCRB1Q8TBF4 217 aaKnown RBP22.47■■□□□ 1.19
AC055854.1-201ENST00000523627 COG3Q96JB2 828 aa22.47■■□□□ 1.19
AC055854.1-201ENST00000523627 TFCP2L1Q9NZI6 479 aa22.47■■□□□ 1.19
AC055854.1-201ENST00000523627 NBPF6Q5VWK0 638 aa22.46■■□□□ 1.19
AC055854.1-201ENST00000523627 NBPF4Q96M43 638 aa22.46■■□□□ 1.19
AC055854.1-201ENST00000523627 RTL1A6NKG5 1358 aa22.44■■□□□ 1.18
AC055854.1-201ENST00000523627 POLD1P28340 1107 aa22.44■■□□□ 1.18
AC055854.1-201ENST00000523627 RRS1Q15050 365 aaKnown RBP22.44■■□□□ 1.18
AC055854.1-201ENST00000523627 COL23A1Q86Y22 540 aaPredicted RBP22.44■■□□□ 1.18
AC055854.1-201ENST00000523627 KLHL34Q8N239 644 aa22.44■■□□□ 1.18
AC055854.1-201ENST00000523627 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
AC055854.1-201ENST00000523627 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
AC055854.1-201ENST00000523627 YBX3P16989 372 aaKnown RBP eCLIP22.43■■□□□ 1.18
AC055854.1-201ENST00000523627 AMPHP49418 695 aa22.43■■□□□ 1.18
AC055854.1-201ENST00000523627 USHBP1Q8N6Y0 703 aa22.43■■□□□ 1.18
AC055854.1-201ENST00000523627 CCNL1Q9UK58 526 aaPredicted RBP22.43■■□□□ 1.18
AC055854.1-201ENST00000523627 FYB1O15117 783 aa22.42■■□□□ 1.18
AC055854.1-201ENST00000523627 C5P01031 1676 aa22.4■■□□□ 1.18
AC055854.1-201ENST00000523627 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
AC055854.1-201ENST00000523627 TOGARAM1Q9Y4F4 1720 aa22.39■■□□□ 1.17
AC055854.1-201ENST00000523627 USP47Q96K76 1375 aa22.38■■□□□ 1.17
AC055854.1-201ENST00000523627 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
AC055854.1-201ENST00000523627 TAF1LQ8IZX4 1826 aa22.37■■□□□ 1.17
AC055854.1-201ENST00000523627 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
AC055854.1-201ENST00000523627 HSP90AB2PQ58FF8 381 aa22.36■■□□□ 1.17
AC055854.1-201ENST00000523627 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
AC055854.1-201ENST00000523627 AMIGO3Q86WK7 504 aa22.36■■□□□ 1.17
AC055854.1-201ENST00000523627 INSRP06213 1382 aa22.36■■□□□ 1.17
AC055854.1-201ENST00000523627 CYP27B1O15528 508 aa22.34■■□□□ 1.17
AC055854.1-201ENST00000523627 CEP350Q5VT06 3117 aa22.33■■□□□ 1.17
AC055854.1-201ENST00000523627 GIGYF1O75420 1035 aaPredicted RBP22.33■■□□□ 1.17
AC055854.1-201ENST00000523627 KIF20BQ96Q89 1820 aa22.32■■□□□ 1.16
AC055854.1-201ENST00000523627 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
AC055854.1-201ENST00000523627 PALLDQ8WX93 1383 aa22.32■■□□□ 1.16
AC055854.1-201ENST00000523627 NCAPD2Q15021 1401 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 PKD1L3Q7Z443 1732 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 ITGB4P16144 1822 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 MSH5O43196 834 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 C4BP0C0L5 1744 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 PCDH11XQ9BZA7 1347 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 PCDH11YQ9BZA8 1340 aa22.31■■□□□ 1.16
AC055854.1-201ENST00000523627 FLT4P35916 1363 aa22.3■■□□□ 1.16
AC055854.1-201ENST00000523627 TATP17735 454 aaPredicted RBP22.3■■□□□ 1.16
AC055854.1-201ENST00000523627 SMG6Q86US8 1419 aaKnown RBP22.3■■□□□ 1.16
AC055854.1-201ENST00000523627 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
AC055854.1-201ENST00000523627 GRIN3BO60391 1043 aa22.29■■□□□ 1.16
AC055854.1-201ENST00000523627 SMIM5Q71RC9 77 aa22.29■■□□□ 1.16
AC055854.1-201ENST00000523627 CARD14Q9BXL6 1004 aa22.29■■□□□ 1.16
AC055854.1-201ENST00000523627 KIF24Q5T7B8 1368 aa22.28■■□□□ 1.16
AC055854.1-201ENST00000523627 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
AC055854.1-201ENST00000523627 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
AC055854.1-201ENST00000523627 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
AC055854.1-201ENST00000523627 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
AC055854.1-201ENST00000523627 ATP10DQ9P241 1426 aa22.27■■□□□ 1.16
AC055854.1-201ENST00000523627 ADCY9O60503 1353 aa22.26■■□□□ 1.15
AC055854.1-201ENST00000523627 ANKRD26Q9UPS8 1709 aa22.26■■□□□ 1.15
AC055854.1-201ENST00000523627 TMF1P82094 1093 aa22.26■■□□□ 1.15
AC055854.1-201ENST00000523627 EMILIN1Q9Y6C2 1016 aa22.26■■□□□ 1.15
AC055854.1-201ENST00000523627 PIGBQ92521 554 aa22.25■■□□□ 1.15
AC055854.1-201ENST00000523627 NKX1-1Q15270 411 aaPredicted RBP22.24■■□□□ 1.15
AC055854.1-201ENST00000523627 FLAD1Q8NFF5 587 aa22.23■■□□□ 1.15
AC055854.1-201ENST00000523627 LINC00116Q8NCU8 138 aa22.21■■□□□ 1.15
AC055854.1-201ENST00000523627 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
AC055854.1-201ENST00000523627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.19■■□□□ 1.14
AC055854.1-201ENST00000523627 SMARCC1Q92922 1105 aaPredicted RBP22.19■■□□□ 1.14
AC055854.1-201ENST00000523627 ITPK1Q13572 414 aa22.18■■□□□ 1.14
AC055854.1-201ENST00000523627 AK7Q96M32 723 aa22.18■■□□□ 1.14
AC055854.1-201ENST00000523627 IGSF1Q8N6C5 1336 aa22.17■■□□□ 1.14
AC055854.1-201ENST00000523627 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
AC055854.1-201ENST00000523627 PHF14O94880 888 aa22.17■■□□□ 1.14
AC055854.1-201ENST00000523627 SIK1P57059 783 aa22.17■■□□□ 1.14
AC055854.1-201ENST00000523627 EYA1Q99502 592 aa22.17■■□□□ 1.14
AC055854.1-201ENST00000523627 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
AC055854.1-201ENST00000523627 ASAP1Q9ULH1 1129 aa22.16■■□□□ 1.14
AC055854.1-201ENST00000523627 KIAA1551Q9HCM1 1747 aa22.16■■□□□ 1.14
AC055854.1-201ENST00000523627 SSFA2P28290 1259 aa22.15■■□□□ 1.14
AC055854.1-201ENST00000523627 WWC3Q9ULE0 1092 aa22.15■■□□□ 1.14
AC055854.1-201ENST00000523627 CICQ96RK0 1608 aaPredicted RBP22.13■■□□□ 1.13
AC055854.1-201ENST00000523627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.13■■□□□ 1.13
AC055854.1-201ENST00000523627 PHKG2P15735 406 aa22.12■■□□□ 1.13
AC055854.1-201ENST00000523627 HMGB2P26583 209 aaKnown RBP22.12■■□□□ 1.13
AC055854.1-201ENST00000523627 GPBP1L1Q9HC44 474 aaPredicted RBP22.12■■□□□ 1.13
AC055854.1-201ENST00000523627 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
AC055854.1-201ENST00000523627 SPG7Q9UQ90 795 aa22.12■■□□□ 1.13
AC055854.1-201ENST00000523627 KDRP35968 1356 aa22.12■■□□□ 1.13
AC055854.1-201ENST00000523627 KIF13BQ9NQT8 1826 aa22.11■■□□□ 1.13
AC055854.1-201ENST00000523627 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
AC055854.1-201ENST00000523627 CDCA8Q53HL2 280 aa22.11■■□□□ 1.13
AC055854.1-201ENST00000523627 IFFO2Q5TF58 517 aa22.11■■□□□ 1.13
AC055854.1-201ENST00000523627 ZNF526Q8TF50 670 aaPredicted RBP22.11■■□□□ 1.13
AC055854.1-201ENST00000523627 SLC4A9Q96Q91 983 aa22.11■■□□□ 1.13
AC055854.1-201ENST00000523627 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms