RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 RGPD2P0DJD1 1756 aa23.62■■□□□ 1.37
CCNC-213ENST00000523541 TATP17735 454 aaPredicted RBP23.61■■□□□ 1.37
CCNC-213ENST00000523541 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
CCNC-213ENST00000523541 NHSQ6T4R5 1651 aa23.6■■□□□ 1.37
CCNC-213ENST00000523541 TXNRD1Q16881 649 aa23.6■■□□□ 1.37
CCNC-213ENST00000523541 SYTL4Q96C24 671 aaPredicted RBP23.6■■□□□ 1.37
CCNC-213ENST00000523541 TNNT2P45379 298 aaPredicted RBP23.59■■□□□ 1.37
CCNC-213ENST00000523541 MORC1Q86VD1 984 aa23.58■■□□□ 1.37
CCNC-213ENST00000523541 PROM2Q8N271 834 aa23.57■■□□□ 1.36
CCNC-213ENST00000523541 STK32BQ9NY57 414 aa23.57■■□□□ 1.36
CCNC-213ENST00000523541 MEGF6O75095 1541 aa23.56■■□□□ 1.36
CCNC-213ENST00000523541 AMER1Q5JTC6 1135 aaPredicted RBP23.55■■□□□ 1.36
CCNC-213ENST00000523541 ANO8Q9HCE9 1232 aaPredicted RBP23.55■■□□□ 1.36
CCNC-213ENST00000523541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.55■■□□□ 1.36
CCNC-213ENST00000523541 NCAPD2Q15021 1401 aa23.55■■□□□ 1.36
CCNC-213ENST00000523541 PLEKHG2Q9H7P9 1386 aa23.54■■□□□ 1.36
CCNC-213ENST00000523541 ANKRD26Q9UPS8 1709 aa23.54■■□□□ 1.36
CCNC-213ENST00000523541 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
CCNC-213ENST00000523541 PPP1R1BQ9UD71 204 aaPredicted RBP23.54■■□□□ 1.36
CCNC-213ENST00000523541 EYA1Q99502 592 aa23.53■■□□□ 1.36
CCNC-213ENST00000523541 MAP2P11137 1827 aaKnown RBP23.53■■□□□ 1.36
CCNC-213ENST00000523541 PCDH11XQ9BZA7 1347 aa23.53■■□□□ 1.36
CCNC-213ENST00000523541 PCDH11YQ9BZA8 1340 aa23.53■■□□□ 1.36
CCNC-213ENST00000523541 BTAF1O14981 1849 aa23.52■■□□□ 1.36
CCNC-213ENST00000523541 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
CCNC-213ENST00000523541 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
CCNC-213ENST00000523541 EIF4A2Q14240 407 aaKnown RBP23.51■■□□□ 1.35
CCNC-213ENST00000523541 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
CCNC-213ENST00000523541 HMGB2P26583 209 aaKnown RBP23.5■■□□□ 1.35
CCNC-213ENST00000523541 SLC27A3Q5K4L6 730 aa23.49■■□□□ 1.35
CCNC-213ENST00000523541 DOT1LQ8TEK3 1739 aa23.49■■□□□ 1.35
CCNC-213ENST00000523541 SLC15A2Q16348 729 aa23.48■■□□□ 1.35
CCNC-213ENST00000523541 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
CCNC-213ENST00000523541 NKX1-1Q15270 411 aaPredicted RBP23.46■■□□□ 1.35
CCNC-213ENST00000523541 SHANK3Q9BYB0 1731 aa23.46■■□□□ 1.35
CCNC-213ENST00000523541 IGSF1Q8N6C5 1336 aa23.45■■□□□ 1.34
CCNC-213ENST00000523541 CYP27B1O15528 508 aa23.45■■□□□ 1.34
CCNC-213ENST00000523541 ZBTB7AO95365 584 aa23.45■■□□□ 1.34
CCNC-213ENST00000523541 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
CCNC-213ENST00000523541 PDGFDQ9GZP0 370 aaPredicted RBP23.42■■□□□ 1.34
CCNC-213ENST00000523541 ATF5Q9Y2D1 282 aaPredicted RBP23.41■■□□□ 1.34
CCNC-213ENST00000523541 AMOTQ4VCS5 1084 aa23.4■■□□□ 1.34
CCNC-213ENST00000523541 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
CCNC-213ENST00000523541 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
CCNC-213ENST00000523541 MTHFSP49914 203 aa23.39■■□□□ 1.33
CCNC-213ENST00000523541 KCNQ4P56696 695 aa23.39■■□□□ 1.33
CCNC-213ENST00000523541 MPRIPQ6WCQ1 1025 aa23.39■■□□□ 1.33
CCNC-213ENST00000523541 IL13P35225 146 aa23.38■■□□□ 1.33
CCNC-213ENST00000523541 PLEKHO1Q53GL0 409 aaPredicted RBP23.38■■□□□ 1.33
CCNC-213ENST00000523541 CC2D1BQ5T0F9 858 aaKnown RBP23.38■■□□□ 1.33
CCNC-213ENST00000523541 CCNL1Q9UK58 526 aaPredicted RBP23.38■■□□□ 1.33
CCNC-213ENST00000523541 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
CCNC-213ENST00000523541 PHKG2P15735 406 aa23.37■■□□□ 1.33
CCNC-213ENST00000523541 ZNF827Q17R98 1081 aa23.37■■□□□ 1.33
CCNC-213ENST00000523541 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
CCNC-213ENST00000523541 PKD1L3Q7Z443 1732 aa23.36■■□□□ 1.33
CCNC-213ENST00000523541 DCAF8L1A6NGE4 600 aa23.36■■□□□ 1.33
CCNC-213ENST00000523541 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
CCNC-213ENST00000523541 PAPPAQ13219 1627 aa23.35■■□□□ 1.33
CCNC-213ENST00000523541 MTFR1LQ9H019 292 aa23.35■■□□□ 1.33
CCNC-213ENST00000523541 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
CCNC-213ENST00000523541 KDRP35968 1356 aa23.34■■□□□ 1.33
CCNC-213ENST00000523541 AKT1S1Q96B36 256 aa23.33■■□□□ 1.33
CCNC-213ENST00000523541 ERVV-2B6SEH9 535 aa23.32■■□□□ 1.32
CCNC-213ENST00000523541 MSH5O43196 834 aa23.32■■□□□ 1.32
CCNC-213ENST00000523541 SULT6B1Q6IMI4 303 aa23.32■■□□□ 1.32
CCNC-213ENST00000523541 LY75O60449 1722 aa23.31■■□□□ 1.32
CCNC-213ENST00000523541 DIAPH1O60610 1272 aaKnown RBP23.31■■□□□ 1.32
CCNC-213ENST00000523541 SLC16A10Q8TF71 515 aa23.31■■□□□ 1.32
CCNC-213ENST00000523541 PIGBQ92521 554 aa23.31■■□□□ 1.32
CCNC-213ENST00000523541 DCAF5Q96JK2 942 aa23.31■■□□□ 1.32
CCNC-213ENST00000523541 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
CCNC-213ENST00000523541 TMOD3Q9NYL9 352 aa23.3■■□□□ 1.32
CCNC-213ENST00000523541 PTGER2P43116 358 aa23.28■■□□□ 1.32
CCNC-213ENST00000523541 TOGARAM1Q9Y4F4 1720 aa23.28■■□□□ 1.32
CCNC-213ENST00000523541 C1orf141Q5JVX7 400 aa23.27■■□□□ 1.32
CCNC-213ENST00000523541 AEBP1Q8IUX7 1158 aa23.27■■□□□ 1.32
CCNC-213ENST00000523541 ZNF530Q6P9A1 599 aaPredicted RBP23.26■■□□□ 1.31
CCNC-213ENST00000523541 ITGB4P16144 1822 aa23.26■■□□□ 1.31
CCNC-213ENST00000523541 POLD1P28340 1107 aa23.25■■□□□ 1.31
CCNC-213ENST00000523541 KLHL34Q8N239 644 aa23.25■■□□□ 1.31
CCNC-213ENST00000523541 PNPLA7Q6ZV29 1317 aa23.25■■□□□ 1.31
CCNC-213ENST00000523541 FLAD1Q8NFF5 587 aa23.24■■□□□ 1.31
CCNC-213ENST00000523541 ARXQ96QS3 562 aa23.24■■□□□ 1.31
CCNC-213ENST00000523541 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
CCNC-213ENST00000523541 FHDC1Q9C0D6 1143 aaPredicted RBP23.23■■□□□ 1.31
CCNC-213ENST00000523541 C5P01031 1676 aa23.22■■□□□ 1.31
CCNC-213ENST00000523541 AKAP4Q5JQC9 854 aa23.22■■□□□ 1.31
CCNC-213ENST00000523541 AK7Q96M32 723 aa23.22■■□□□ 1.31
CCNC-213ENST00000523541 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
CCNC-213ENST00000523541 TUBGCP6Q96RT7 1819 aa23.2■■□□□ 1.3
CCNC-213ENST00000523541 LOC102724428A0A0B4J2F2 783 aa23.2■■□□□ 1.3
CCNC-213ENST00000523541 SIK1P57059 783 aa23.2■■□□□ 1.3
CCNC-213ENST00000523541 CABP4P57796 275 aa23.2■■□□□ 1.3
CCNC-213ENST00000523541 SGIP1Q9BQI5 828 aa23.2■■□□□ 1.3
CCNC-213ENST00000523541 ATG3Q9NT62 314 aa23.2■■□□□ 1.3
CCNC-213ENST00000523541 ASAP1Q9ULH1 1129 aa23.19■■□□□ 1.3
CCNC-213ENST00000523541 HMOX1P09601 288 aa23.18■■□□□ 1.3
CCNC-213ENST00000523541 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
CCNC-213ENST00000523541 COL23A1Q86Y22 540 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms