RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 CNGB1Q14028 1251 aaPredicted RBP30.63■■■□□ 2.49
HDAC2-214ENST00000523240 SHANK3Q9BYB0 1731 aa30.63■■■□□ 2.49
HDAC2-214ENST00000523240 RREB1Q92766 1687 aa30.62■■■□□ 2.49
HDAC2-214ENST00000523240 RGPD3A6NKT7 1758 aaPredicted RBP30.62■■■□□ 2.49
HDAC2-214ENST00000523240 RGPD4Q7Z3J3 1758 aa30.62■■■□□ 2.49
HDAC2-214ENST00000523240 EIF4A2Q14240 407 aaKnown RBP30.61■■■□□ 2.49
HDAC2-214ENST00000523240 EYA1Q99502 592 aa30.59■■■□□ 2.49
HDAC2-214ENST00000523240 NUP188Q5SRE5 1749 aa30.59■■■□□ 2.49
HDAC2-214ENST00000523240 PTF1AQ7RTS3 328 aa30.58■■■□□ 2.49
HDAC2-214ENST00000523240 DOT1LQ8TEK3 1739 aa30.57■■■□□ 2.48
HDAC2-214ENST00000523240 KCNQ2O43526 872 aa30.57■■■□□ 2.48
HDAC2-214ENST00000523240 BTAF1O14981 1849 aa30.57■■■□□ 2.48
HDAC2-214ENST00000523240 NCAPD2Q15021 1401 aa30.56■■■□□ 2.48
HDAC2-214ENST00000523240 PCDH11XQ9BZA7 1347 aa30.56■■■□□ 2.48
HDAC2-214ENST00000523240 PCDH11YQ9BZA8 1340 aa30.56■■■□□ 2.48
HDAC2-214ENST00000523240 PLSCR1O15162 318 aa30.56■■■□□ 2.48
HDAC2-214ENST00000523240 NPC1L1Q9UHC9 1359 aa30.55■■■□□ 2.48
HDAC2-214ENST00000523240 PKD1L3Q7Z443 1732 aa30.55■■■□□ 2.48
HDAC2-214ENST00000523240 SYTL4Q96C24 671 aaPredicted RBP30.54■■■□□ 2.48
HDAC2-214ENST00000523240 PSDA5PKW4 1024 aaPredicted RBP30.53■■■□□ 2.48
HDAC2-214ENST00000523240 NBPF14Q5TI25 921 aa30.53■■■□□ 2.48
HDAC2-214ENST00000523240 SPG7Q9UQ90 795 aa30.51■■■□□ 2.47
HDAC2-214ENST00000523240 MTHFSP49914 203 aa30.5■■■□□ 2.47
HDAC2-214ENST00000523240 IGSF1Q8N6C5 1336 aa30.49■■■□□ 2.47
HDAC2-214ENST00000523240 R3HDM1Q15032 1099 aaKnown RBP30.49■■■□□ 2.47
HDAC2-214ENST00000523240 PRIM1P49642 420 aaKnown RBP30.46■■■□□ 2.47
HDAC2-214ENST00000523240 ZEB1P37275 1124 aaPredicted RBP30.45■■■□□ 2.47
HDAC2-214ENST00000523240 TXNRD1Q16881 649 aa30.44■■■□□ 2.46
HDAC2-214ENST00000523240 CYP27B1O15528 508 aa30.43■■■□□ 2.46
HDAC2-214ENST00000523240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.43■■■□□ 2.468e-7■■■■□ 21.4
HDAC2-214ENST00000523240 IL13P35225 146 aa30.41■■■□□ 2.46
HDAC2-214ENST00000523240 PLEKHG2Q9H7P9 1386 aa30.41■■■□□ 2.46
HDAC2-214ENST00000523240 SULT6B1Q6IMI4 303 aa30.4■■■□□ 2.46
HDAC2-214ENST00000523240 DIAPH1O60610 1272 aaKnown RBP30.39■■■□□ 2.46
HDAC2-214ENST00000523240 ITGB4P16144 1822 aa30.38■■■□□ 2.45
HDAC2-214ENST00000523240 PLEKHO1Q53GL0 409 aaPredicted RBP30.38■■■□□ 2.45
HDAC2-214ENST00000523240 IFNL2Q8IZJ0 200 aa30.38■■■□□ 2.45
HDAC2-214ENST00000523240 PROM2Q8N271 834 aa30.38■■■□□ 2.45
HDAC2-214ENST00000523240 TOGARAM1Q9Y4F4 1720 aa30.37■■■□□ 2.45
HDAC2-214ENST00000523240 AEBP1Q8IUX7 1158 aa30.37■■■□□ 2.45
HDAC2-214ENST00000523240 CFAP53Q96M91 514 aa30.35■■■□□ 2.45
HDAC2-214ENST00000523240 STK32BQ9NY57 414 aa30.35■■■□□ 2.45
HDAC2-214ENST00000523240 PHKG2P15735 406 aa30.34■■■□□ 2.45
HDAC2-214ENST00000523240 AMOTQ4VCS5 1084 aa30.34■■■□□ 2.45
HDAC2-214ENST00000523240 MPRIPQ6WCQ1 1025 aa30.34■■■□□ 2.45
HDAC2-214ENST00000523240 ZNF530Q6P9A1 599 aaPredicted RBP30.33■■■□□ 2.45
HDAC2-214ENST00000523240 ANO8Q9HCE9 1232 aaPredicted RBP30.33■■■□□ 2.45
HDAC2-214ENST00000523240 KDRP35968 1356 aa30.32■■■□□ 2.44
HDAC2-214ENST00000523240 NKX1-1Q15270 411 aaPredicted RBP30.32■■■□□ 2.44
HDAC2-214ENST00000523240 LY75O60449 1722 aa30.32■■■□□ 2.44
HDAC2-214ENST00000523240 U2SURPO15042 1029 aaKnown RBP30.3■■■□□ 2.44
HDAC2-214ENST00000523240 HSP90AB1P08238 724 aaKnown RBP30.3■■■□□ 2.44
HDAC2-214ENST00000523240 HMOX1P09601 288 aa30.3■■■□□ 2.44
HDAC2-214ENST00000523240 C1orf141Q5JVX7 400 aa30.3■■■□□ 2.44
HDAC2-214ENST00000523240 SLC27A3Q5K4L6 730 aa30.3■■■□□ 2.44
HDAC2-214ENST00000523240 LRP5O75197 1615 aa30.29■■■□□ 2.44
HDAC2-214ENST00000523240 COL3A1P02461 1466 aaPredicted RBP30.29■■■□□ 2.44
HDAC2-214ENST00000523240 PPP2R1AP30153 589 aa30.27■■■□□ 2.44
HDAC2-214ENST00000523240 TMOD3Q9NYL9 352 aa30.27■■■□□ 2.44
HDAC2-214ENST00000523240 DDX10Q13206 875 aaKnown RBP30.26■■■□□ 2.43
HDAC2-214ENST00000523240 CCNL1Q9UK58 526 aaPredicted RBP30.26■■■□□ 2.43
HDAC2-214ENST00000523240 PAPPAQ13219 1627 aa30.25■■■□□ 2.43
HDAC2-214ENST00000523240 SLC15A2Q16348 729 aa30.25■■■□□ 2.43
HDAC2-214ENST00000523240 SMARCC1Q92922 1105 aaPredicted RBP30.24■■■□□ 2.43
HDAC2-214ENST00000523240 DCAF5Q96JK2 942 aa30.24■■■□□ 2.43
HDAC2-214ENST00000523240 LRRC4BQ9NT99 713 aa30.24■■■□□ 2.43
HDAC2-214ENST00000523240 PALLDQ8WX93 1383 aa30.24■■■□□ 2.43
HDAC2-214ENST00000523240 NUDCQ9Y266 331 aa30.23■■■□□ 2.43
HDAC2-214ENST00000523240 PIGBQ92521 554 aa30.22■■■□□ 2.43
HDAC2-214ENST00000523240 KCNQ4P56696 695 aa30.21■■■□□ 2.43
HDAC2-214ENST00000523240 CASZ1Q86V15 1759 aa30.2■■■□□ 2.42
HDAC2-214ENST00000523240 ERVV-2B6SEH9 535 aa30.18■■■□□ 2.42
HDAC2-214ENST00000523240 HMGB2P26583 209 aaKnown RBP30.18■■■□□ 2.42
HDAC2-214ENST00000523240 C5P01031 1676 aa30.17■■■□□ 2.42
HDAC2-214ENST00000523240 CABP4P57796 275 aa30.17■■■□□ 2.42
HDAC2-214ENST00000523240 SCN11AQ9UI33 1791 aa30.17■■■□□ 2.42
HDAC2-214ENST00000523240 VIRMAQ69YN4 1812 aaKnown RBP30.17■■■□□ 2.42
HDAC2-214ENST00000523240 KDM6AO15550 1401 aaPredicted RBP30.16■■■□□ 2.42
HDAC2-214ENST00000523240 ZNF827Q17R98 1081 aa30.16■■■□□ 2.42
HDAC2-214ENST00000523240 AKAP4Q5JQC9 854 aa30.16■■■□□ 2.42
HDAC2-214ENST00000523240 TAF1LQ8IZX4 1826 aa30.15■■■□□ 2.42
HDAC2-214ENST00000523240 SPON1Q9HCB6 807 aa30.15■■■□□ 2.42
HDAC2-214ENST00000523240 TFCP2L1Q9NZI6 479 aa30.14■■■□□ 2.42
HDAC2-214ENST00000523240 QSER1Q2KHR3 1735 aa30.13■■■□□ 2.41
HDAC2-214ENST00000523240 U2AF1L5P0DN76 240 aaPredicted RBP30.13■■■□□ 2.41
HDAC2-214ENST00000523240 U2AF1Q01081 240 aaKnown RBP eCLIP30.13■■■□□ 2.41
HDAC2-214ENST00000523240 TUBGCP6Q96RT7 1819 aa30.12■■■□□ 2.41
HDAC2-214ENST00000523240 AKT1S1Q96B36 256 aa30.12■■■□□ 2.41
HDAC2-214ENST00000523240 ASAP1Q9ULH1 1129 aa30.12■■■□□ 2.41
HDAC2-214ENST00000523240 SRCAPQ6ZRS2 3230 aa30.11■■■□□ 2.41
HDAC2-214ENST00000523240 RALBP1Q15311 655 aa30.11■■■□□ 2.41
HDAC2-214ENST00000523240 MTHFSDQ2M296 383 aaKnown RBP30.11■■■□□ 2.41
HDAC2-214ENST00000523240 PDGFDQ9GZP0 370 aaPredicted RBP30.11■■■□□ 2.41
HDAC2-214ENST00000523240 ZBTB7AO95365 584 aa30.1■■■□□ 2.41
HDAC2-214ENST00000523240 PPP1R1BQ9UD71 204 aaPredicted RBP30.1■■■□□ 2.41
HDAC2-214ENST00000523240 LOC102724428A0A0B4J2F2 783 aa30.08■■■□□ 2.41
HDAC2-214ENST00000523240 PRKAR2BP31323 418 aa30.08■■■□□ 2.41
HDAC2-214ENST00000523240 SIK1P57059 783 aa30.08■■■□□ 2.41
HDAC2-214ENST00000523240 GAS2L2Q8NHY3 880 aa30.08■■■□□ 2.41
HDAC2-214ENST00000523240 ATG3Q9NT62 314 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms