RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
ERGIC1-211ENST00000523215 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
ERGIC1-211ENST00000523215 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
ERGIC1-211ENST00000523215 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 IL13P35225 146 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 ADAMTSL3P82987 1691 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
ERGIC1-211ENST00000523215 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 OSBPL3Q9H4L5 887 aa13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
ERGIC1-211ENST00000523215 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
ERGIC1-211ENST00000523215 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
ERGIC1-211ENST00000523215 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
ERGIC1-211ENST00000523215 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
ERGIC1-211ENST00000523215 TERF1P54274 439 aa13.14□□□□□ -0.31
ERGIC1-211ENST00000523215 CLCN1P35523 988 aa13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 COL18A1P39060 1754 aa13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-211ENST00000523215 PTMSP20962 102 aa13.12□□□□□ -0.31
ERGIC1-211ENST00000523215 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERGIC1-211ENST00000523215 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
ERGIC1-211ENST00000523215 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
ERGIC1-211ENST00000523215 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-211ENST00000523215 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
ERGIC1-211ENST00000523215 USP6P35125 1406 aa13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 MCM4P33991 863 aa13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 VAMP4O75379 141 aa13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 BECN1Q14457 450 aa13.11□□□□□ -0.31
ERGIC1-211ENST00000523215 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 L1TD1Q5T7N2 865 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 RGS3P49796 1198 aa13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
ERGIC1-211ENST00000523215 C5P01031 1676 aa13.09□□□□□ -0.31
ERGIC1-211ENST00000523215 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-211ENST00000523215 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
ERGIC1-211ENST00000523215 STK26Q9P289 416 aa13.09□□□□□ -0.31
ERGIC1-211ENST00000523215 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
ERGIC1-211ENST00000523215 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
ERGIC1-211ENST00000523215 HS1BP3Q53T59 392 aa13.08□□□□□ -0.31
ERGIC1-211ENST00000523215 CHMP5Q9NZZ3 219 aa13.08□□□□□ -0.31
ERGIC1-211ENST00000523215 CLSTN1O94985 981 aa13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 PDLIM2Q96JY6 352 aa13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 PRDM16Q9HAZ2 1276 aa13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 METP08581 1390 aa13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
ERGIC1-211ENST00000523215 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
ERGIC1-211ENST00000523215 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
ERGIC1-211ENST00000523215 JCADQ9P266 1359 aa13.07□□□□□ -0.32
ERGIC1-211ENST00000523215 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
ERGIC1-211ENST00000523215 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
ERGIC1-211ENST00000523215 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
ERGIC1-211ENST00000523215 ZNF445P59923 1031 aa13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 TJP1Q07157 1748 aa13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 FBLN1P23142 703 aa13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 SHANK3Q9BYB0 1731 aa13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
ERGIC1-211ENST00000523215 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
ERGIC1-211ENST00000523215 AOX1Q06278 1338 aa13.05□□□□□ -0.32
ERGIC1-211ENST00000523215 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
ERGIC1-211ENST00000523215 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
ERGIC1-211ENST00000523215 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
ERGIC1-211ENST00000523215 CABP1Q9NZU7 370 aa13.05□□□□□ -0.32
ERGIC1-211ENST00000523215 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
ERGIC1-211ENST00000523215 POGKQ9P215 609 aa13.04□□□□□ -0.32
ERGIC1-211ENST00000523215 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
ERGIC1-211ENST00000523215 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
ERGIC1-211ENST00000523215 RRAGDQ9NQL2 400 aaPredicted RBP13.04□□□□□ -0.32
ERGIC1-211ENST00000523215 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 PTPRCP08575 1304 aa13.03□□□□□ -0.32
ERGIC1-211ENST00000523215 TMEM57Q8N5G2 664 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms