RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-208ENST00000523203 CHD4Q14839 1912 aa14.31□□□□□ -0.12
CSNK1A1-208ENST00000523203 SLC16A10Q8TF71 515 aa14.31□□□□□ -0.12
CSNK1A1-208ENST00000523203 RRS1Q15050 365 aaKnown RBP14.3□□□□□ -0.12
CSNK1A1-208ENST00000523203 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
CSNK1A1-208ENST00000523203 TFCP2L1Q9NZI6 479 aa14.3□□□□□ -0.12
CSNK1A1-208ENST00000523203 RTL1A6NKG5 1358 aa14.3□□□□□ -0.12
CSNK1A1-208ENST00000523203 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
CSNK1A1-208ENST00000523203 DOT1LQ8TEK3 1739 aa14.29□□□□□ -0.12
CSNK1A1-208ENST00000523203 UTRNP46939 3433 aa14.29□□□□□ -0.12
CSNK1A1-208ENST00000523203 FYB1O15117 783 aa14.29□□□□□ -0.12
CSNK1A1-208ENST00000523203 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
CSNK1A1-208ENST00000523203 POLD1P28340 1107 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 KCNQ4P56696 695 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 CGNL1Q0VF96 1302 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 CDCA8Q53HL2 280 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 SMG6Q86US8 1419 aaKnown RBP14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 SHANK3Q9BYB0 1731 aa14.28□□□□□ -0.12
CSNK1A1-208ENST00000523203 LY75O60449 1722 aa14.27□□□□□ -0.12
CSNK1A1-208ENST00000523203 MEGF6O75095 1541 aa14.27□□□□□ -0.12
CSNK1A1-208ENST00000523203 MAP3K5Q99683 1374 aa14.27□□□□□ -0.12
CSNK1A1-208ENST00000523203 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.13
CSNK1A1-208ENST00000523203 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.13
CSNK1A1-208ENST00000523203 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
CSNK1A1-208ENST00000523203 TATP17735 454 aaPredicted RBP14.26□□□□□ -0.13
CSNK1A1-208ENST00000523203 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
CSNK1A1-208ENST00000523203 ZNF784Q8NCA9 323 aaPredicted RBP14.26□□□□□ -0.13
CSNK1A1-208ENST00000523203 CCNL1Q9UK58 526 aaPredicted RBP14.26□□□□□ -0.13
CSNK1A1-208ENST00000523203 NSD2O96028 1365 aa14.25□□□□□ -0.13
CSNK1A1-208ENST00000523203 KIF20BQ96Q89 1820 aa14.25□□□□□ -0.13
CSNK1A1-208ENST00000523203 GPR162Q16538 588 aa14.25□□□□□ -0.13
CSNK1A1-208ENST00000523203 MSH5O43196 834 aa14.24□□□□□ -0.13
CSNK1A1-208ENST00000523203 HSPA5P11021 654 aaKnown RBP14.24□□□□□ -0.13
CSNK1A1-208ENST00000523203 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
CSNK1A1-208ENST00000523203 INSRP06213 1382 aa14.23□□□□□ -0.13
CSNK1A1-208ENST00000523203 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
CSNK1A1-208ENST00000523203 COL24A1Q17RW2 1714 aa14.23□□□□□ -0.13
CSNK1A1-208ENST00000523203 FLT4P35916 1363 aa14.22□□□□□ -0.13
CSNK1A1-208ENST00000523203 PCDH11XQ9BZA7 1347 aa14.22□□□□□ -0.13
CSNK1A1-208ENST00000523203 PCDH11YQ9BZA8 1340 aa14.22□□□□□ -0.13
CSNK1A1-208ENST00000523203 HMGB2P26583 209 aaKnown RBP14.22□□□□□ -0.13
CSNK1A1-208ENST00000523203 EIF4G2P78344 907 aaKnown RBP eCLIP14.22□□□□□ -0.13
CSNK1A1-208ENST00000523203 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
CSNK1A1-208ENST00000523203 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
CSNK1A1-208ENST00000523203 COL23A1Q86Y22 540 aaPredicted RBP14.2□□□□□ -0.14
CSNK1A1-208ENST00000523203 CARD14Q9BXL6 1004 aa14.2□□□□□ -0.14
CSNK1A1-208ENST00000523203 GOLGB1Q14789 3259 aaKnown RBP14.2□□□□□ -0.14
CSNK1A1-208ENST00000523203 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
CSNK1A1-208ENST00000523203 MPRIPQ6WCQ1 1025 aa14.19□□□□□ -0.14
CSNK1A1-208ENST00000523203 EMILIN1Q9Y6C2 1016 aa14.19□□□□□ -0.14
CSNK1A1-208ENST00000523203 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
CSNK1A1-208ENST00000523203 ITGB4P16144 1822 aa14.18□□□□□ -0.14
CSNK1A1-208ENST00000523203 NSD3Q9BZ95 1437 aa14.18□□□□□ -0.14
CSNK1A1-208ENST00000523203 C5P01031 1676 aa14.18□□□□□ -0.14
CSNK1A1-208ENST00000523203 NLGN2Q8NFZ4 835 aa14.18□□□□□ -0.14
CSNK1A1-208ENST00000523203 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
CSNK1A1-208ENST00000523203 CYP27B1O15528 508 aa14.17□□□□□ -0.14
CSNK1A1-208ENST00000523203 MSL1Q68DK7 614 aa14.17□□□□□ -0.14
CSNK1A1-208ENST00000523203 FLAD1Q8NFF5 587 aa14.17□□□□□ -0.14
CSNK1A1-208ENST00000523203 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
CSNK1A1-208ENST00000523203 PALLDQ8WX93 1383 aa14.17□□□□□ -0.14
CSNK1A1-208ENST00000523203 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
CSNK1A1-208ENST00000523203 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.14
CSNK1A1-208ENST00000523203 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
CSNK1A1-208ENST00000523203 AK7Q96M32 723 aa14.14□□□□□ -0.15
CSNK1A1-208ENST00000523203 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
CSNK1A1-208ENST00000523203 TOGARAM1Q9Y4F4 1720 aa14.14□□□□□ -0.15
CSNK1A1-208ENST00000523203 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
CSNK1A1-208ENST00000523203 C1QTNF8P60827 252 aa14.13□□□□□ -0.15
CSNK1A1-208ENST00000523203 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
CSNK1A1-208ENST00000523203 PIGBQ92521 554 aa14.13□□□□□ -0.15
CSNK1A1-208ENST00000523203 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
CSNK1A1-208ENST00000523203 ANKRD26Q9UPS8 1709 aa14.12□□□□□ -0.15
CSNK1A1-208ENST00000523203 EYA1Q99502 592 aa14.12□□□□□ -0.15
CSNK1A1-208ENST00000523203 CD2APQ9Y5K6 639 aa14.12□□□□□ -0.15
CSNK1A1-208ENST00000523203 NCAPD2Q15021 1401 aa14.12□□□□□ -0.15
CSNK1A1-208ENST00000523203 YBX3P16989 372 aaKnown RBP eCLIP14.11□□□□□ -0.152e-8■□□□□ 9.4
CSNK1A1-208ENST00000523203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.15
CSNK1A1-208ENST00000523203 TMOD3Q9NYL9 352 aa14.11□□□□□ -0.15
CSNK1A1-208ENST00000523203 POLKQ9UBT6 870 aa14.11□□□□□ -0.15
CSNK1A1-208ENST00000523203 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
CSNK1A1-208ENST00000523203 SENP3-EIF4A1A0A087X0R7 540 aa14.1□□□□□ -0.15
CSNK1A1-208ENST00000523203 PHF14O94880 888 aa14.1□□□□□ -0.15
CSNK1A1-208ENST00000523203 IFNL2Q8IZJ0 200 aa14.1□□□□□ -0.15
CSNK1A1-208ENST00000523203 LOC102724428A0A0B4J2F2 783 aa14.09□□□□□ -0.15
CSNK1A1-208ENST00000523203 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
CSNK1A1-208ENST00000523203 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
CSNK1A1-208ENST00000523203 SIK1P57059 783 aa14.09□□□□□ -0.15
CSNK1A1-208ENST00000523203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.08□□□□□ -0.16
CSNK1A1-208ENST00000523203 PHKG2P15735 406 aa14.08□□□□□ -0.16
CSNK1A1-208ENST00000523203 SSFA2P28290 1259 aa14.08□□□□□ -0.16
CSNK1A1-208ENST00000523203 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
CSNK1A1-208ENST00000523203 KIF7Q2M1P5 1343 aa14.08□□□□□ -0.16
CSNK1A1-208ENST00000523203 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
CSNK1A1-208ENST00000523203 SMIM5Q71RC9 77 aa14.07□□□□□ -0.16
CSNK1A1-208ENST00000523203 AMIGO3Q86WK7 504 aa14.07□□□□□ -0.16
CSNK1A1-208ENST00000523203 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
CSNK1A1-208ENST00000523203 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms