RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 ZNF827Q17R98 1081 aa19.68■□□□□ 0.74
HMBOX1-209ENST00000522468 CDCA8Q53HL2 280 aa19.68■□□□□ 0.74
HMBOX1-209ENST00000522468 NBPF6Q5VWK0 638 aa19.68■□□□□ 0.74
HMBOX1-209ENST00000522468 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
HMBOX1-209ENST00000522468 CARD14Q9BXL6 1004 aa19.68■□□□□ 0.74
HMBOX1-209ENST00000522468 MTFR1LQ9H019 292 aa19.67■□□□□ 0.74
HMBOX1-209ENST00000522468 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
HMBOX1-209ENST00000522468 INSRP06213 1382 aa19.67■□□□□ 0.74
HMBOX1-209ENST00000522468 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
HMBOX1-209ENST00000522468 ZCRB1Q8TBF4 217 aaKnown RBP19.66■□□□□ 0.74
HMBOX1-209ENST00000522468 ATF5Q9Y2D1 282 aaPredicted RBP19.66■□□□□ 0.74
HMBOX1-209ENST00000522468 AKT1S1Q96B36 256 aa19.65■□□□□ 0.74
HMBOX1-209ENST00000522468 FLT4P35916 1363 aa19.65■□□□□ 0.74
HMBOX1-209ENST00000522468 HSP90AB2PQ58FF8 381 aa19.64■□□□□ 0.73
HMBOX1-209ENST00000522468 SLC27A3Q5K4L6 730 aa19.64■□□□□ 0.73
HMBOX1-209ENST00000522468 PCGF6Q9BYE7 350 aa19.64■□□□□ 0.73
HMBOX1-209ENST00000522468 CGNL1Q0VF96 1302 aa19.64■□□□□ 0.73
HMBOX1-209ENST00000522468 NSD3Q9BZ95 1437 aa19.64■□□□□ 0.73
HMBOX1-209ENST00000522468 GOLGB1Q14789 3259 aaKnown RBP19.64■□□□□ 0.73
HMBOX1-209ENST00000522468 SMG6Q86US8 1419 aaKnown RBP19.63■□□□□ 0.73
HMBOX1-209ENST00000522468 PRIM1P49642 420 aaKnown RBP19.63■□□□□ 0.73
HMBOX1-209ENST00000522468 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
HMBOX1-209ENST00000522468 USHBP1Q8N6Y0 703 aa19.62■□□□□ 0.73
HMBOX1-209ENST00000522468 PKD1L3Q7Z443 1732 aa19.62■□□□□ 0.73
HMBOX1-209ENST00000522468 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
HMBOX1-209ENST00000522468 TOGARAM1Q9Y4F4 1720 aa19.6■□□□□ 0.73
HMBOX1-209ENST00000522468 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
HMBOX1-209ENST00000522468 SYTL4Q96C24 671 aaPredicted RBP19.59■□□□□ 0.73
HMBOX1-209ENST00000522468 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
HMBOX1-209ENST00000522468 FHDC1Q9C0D6 1143 aaPredicted RBP19.59■□□□□ 0.73
HMBOX1-209ENST00000522468 EMILIN1Q9Y6C2 1016 aa19.59■□□□□ 0.73
HMBOX1-209ENST00000522468 PNPLA7Q6ZV29 1317 aa19.58■□□□□ 0.73
HMBOX1-209ENST00000522468 YY1P25490 414 aa19.58■□□□□ 0.72
HMBOX1-209ENST00000522468 ITGB4P16144 1822 aa19.58■□□□□ 0.72
HMBOX1-209ENST00000522468 KCNQ4P56696 695 aa19.57■□□□□ 0.72
HMBOX1-209ENST00000522468 RAPGEF4Q8WZA2 1011 aa19.57■□□□□ 0.72
HMBOX1-209ENST00000522468 C5P01031 1676 aa19.56■□□□□ 0.72
HMBOX1-209ENST00000522468 TAF1LQ8IZX4 1826 aa19.56■□□□□ 0.72
HMBOX1-209ENST00000522468 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
HMBOX1-209ENST00000522468 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
HMBOX1-209ENST00000522468 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
HMBOX1-209ENST00000522468 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
HMBOX1-209ENST00000522468 ARXQ96QS3 562 aa19.55■□□□□ 0.72
HMBOX1-209ENST00000522468 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
HMBOX1-209ENST00000522468 CYP27B1O15528 508 aa19.54■□□□□ 0.72
HMBOX1-209ENST00000522468 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
HMBOX1-209ENST00000522468 CHD4Q14839 1912 aa19.53■□□□□ 0.72
HMBOX1-209ENST00000522468 CCNL1Q9UK58 526 aaPredicted RBP19.52■□□□□ 0.72
HMBOX1-209ENST00000522468 TFCP2L1Q9NZI6 479 aa19.51■□□□□ 0.71
HMBOX1-209ENST00000522468 POLKQ9UBT6 870 aa19.5■□□□□ 0.71
HMBOX1-209ENST00000522468 NKX1-1Q15270 411 aaPredicted RBP19.49■□□□□ 0.71
HMBOX1-209ENST00000522468 EYA1Q99502 592 aa19.48■□□□□ 0.71
HMBOX1-209ENST00000522468 PALLDQ8WX93 1383 aa19.47■□□□□ 0.71
HMBOX1-209ENST00000522468 C4BP0C0L5 1744 aa19.47■□□□□ 0.71
HMBOX1-209ENST00000522468 PPM1GO15355 546 aaPredicted RBP19.46■□□□□ 0.71
HMBOX1-209ENST00000522468 HSPA5P11021 654 aaKnown RBP19.46■□□□□ 0.71
HMBOX1-209ENST00000522468 COL23A1Q86Y22 540 aaPredicted RBP19.46■□□□□ 0.71
HMBOX1-209ENST00000522468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.46■□□□□ 0.71
HMBOX1-209ENST00000522468 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
HMBOX1-209ENST00000522468 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
HMBOX1-209ENST00000522468 MPRIPQ6WCQ1 1025 aa19.45■□□□□ 0.7
HMBOX1-209ENST00000522468 PLEKHG2Q9H7P9 1386 aa19.44■□□□□ 0.7
HMBOX1-209ENST00000522468 POLD1P28340 1107 aa19.44■□□□□ 0.7
HMBOX1-209ENST00000522468 EIF4A2Q14240 407 aaKnown RBP19.43■□□□□ 0.7
HMBOX1-209ENST00000522468 PIGBQ92521 554 aa19.43■□□□□ 0.7
HMBOX1-209ENST00000522468 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
HMBOX1-209ENST00000522468 SMARCC1Q92922 1105 aaPredicted RBP19.41■□□□□ 0.7
HMBOX1-209ENST00000522468 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
HMBOX1-209ENST00000522468 PANK3Q9H999 370 aa19.41■□□□□ 0.7
HMBOX1-209ENST00000522468 PHKG2P15735 406 aa19.4■□□□□ 0.7
HMBOX1-209ENST00000522468 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
HMBOX1-209ENST00000522468 NLGN2Q8NFZ4 835 aa19.4■□□□□ 0.7
HMBOX1-209ENST00000522468 IGSF1Q8N6C5 1336 aa19.4■□□□□ 0.7
HMBOX1-209ENST00000522468 HMGB2P26583 209 aaKnown RBP19.39■□□□□ 0.69
HMBOX1-209ENST00000522468 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.69
HMBOX1-209ENST00000522468 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
HMBOX1-209ENST00000522468 ZNF831Q5JPB2 1677 aa19.37■□□□□ 0.69
HMBOX1-209ENST00000522468 IFNL2Q8IZJ0 200 aa19.37■□□□□ 0.69
HMBOX1-209ENST00000522468 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
HMBOX1-209ENST00000522468 LOC102724428A0A0B4J2F2 783 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 MSH5O43196 834 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 SIK1P57059 783 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 KLHL34Q8N239 644 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 LINC00116Q8NCU8 138 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 TMOD3Q9NYL9 352 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
HMBOX1-209ENST00000522468 GPR162Q16538 588 aa19.34■□□□□ 0.69
HMBOX1-209ENST00000522468 KDRP35968 1356 aa19.33■□□□□ 0.69
HMBOX1-209ENST00000522468 ITPK1Q13572 414 aa19.33■□□□□ 0.68
HMBOX1-209ENST00000522468 COL5A3P25940 1745 aaPredicted RBP19.33■□□□□ 0.68
HMBOX1-209ENST00000522468 SMIM5Q71RC9 77 aa19.32■□□□□ 0.68
HMBOX1-209ENST00000522468 AK7Q96M32 723 aa19.32■□□□□ 0.68
HMBOX1-209ENST00000522468 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
HMBOX1-209ENST00000522468 KDM6AO15550 1401 aaPredicted RBP19.32■□□□□ 0.68
HMBOX1-209ENST00000522468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.31■□□□□ 0.68
HMBOX1-209ENST00000522468 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.687e-7■■■■□ 22.3
HMBOX1-209ENST00000522468 SSFA2P28290 1259 aa19.31■□□□□ 0.68
HMBOX1-209ENST00000522468 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms