RNA–Protein interactions for RNA: ENST00000522266.1

REPIN1-219, Transcript of replication initiator 1, humanhuman

TSL 2

Gene REPIN1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-219ENST00000522266 MEGF6O75095 1541 aa31.49■■■□□ 2.63
REPIN1-219ENST00000522266 MARCH10Q8NA82 808 aaPredicted RBP31.48■■■□□ 2.63
REPIN1-219ENST00000522266 SPG7Q9UQ90 795 aa31.48■■■□□ 2.63
REPIN1-219ENST00000522266 KDRP35968 1356 aa31.46■■■□□ 2.63
REPIN1-219ENST00000522266 COL3A1P02461 1466 aaPredicted RBP31.45■■■□□ 2.62
REPIN1-219ENST00000522266 MYBBP1AQ9BQG0 1328 aaKnown RBP31.45■■■□□ 2.62
REPIN1-219ENST00000522266 PCDH11XQ9BZA7 1347 aa31.45■■■□□ 2.62
REPIN1-219ENST00000522266 PCDH11YQ9BZA8 1340 aa31.45■■■□□ 2.62
REPIN1-219ENST00000522266 AMOTQ4VCS5 1084 aa31.43■■■□□ 2.62
REPIN1-219ENST00000522266 PKD1L3Q7Z443 1732 aa31.43■■■□□ 2.62
REPIN1-219ENST00000522266 FAM182BQ5T319 152 aa31.42■■■□□ 2.62
REPIN1-219ENST00000522266 SULT6B1Q6IMI4 303 aa31.42■■■□□ 2.62
REPIN1-219ENST00000522266 DDX54Q8TDD1 881 aaKnown RBP31.41■■■□□ 2.62
REPIN1-219ENST00000522266 PRKRIP1Q9H875 184 aaPredicted RBP31.41■■■□□ 2.62
REPIN1-219ENST00000522266 SBF2Q86WG5 1849 aa31.4■■■□□ 2.62
REPIN1-219ENST00000522266 PLEKHO1Q53GL0 409 aaPredicted RBP31.4■■■□□ 2.62
REPIN1-219ENST00000522266 SHANK3Q9BYB0 1731 aa31.38■■■□□ 2.61
REPIN1-219ENST00000522266 BAG6P46379 1132 aa31.37■■■□□ 2.61
REPIN1-219ENST00000522266 BCL11BQ9C0K0 894 aaPredicted RBP31.37■■■□□ 2.61
REPIN1-219ENST00000522266 U2SURPO15042 1029 aaKnown RBP31.36■■■□□ 2.61
REPIN1-219ENST00000522266 TRIM37O94972 964 aa31.36■■■□□ 2.61
REPIN1-219ENST00000522266 EP400Q96L91 3159 aa31.36■■■□□ 2.61
REPIN1-219ENST00000522266 IFNL2Q8IZJ0 200 aa31.34■■■□□ 2.61
REPIN1-219ENST00000522266 HSP90AB1P08238 724 aaKnown RBP31.33■■■□□ 2.61
REPIN1-219ENST00000522266 NKX1-1Q15270 411 aaPredicted RBP31.32■■■□□ 2.6
REPIN1-219ENST00000522266 AEBP1Q8IUX7 1158 aa31.32■■■□□ 2.6
REPIN1-219ENST00000522266 TNS1Q9HBL0 1735 aaKnown RBP31.32■■■□□ 2.6
REPIN1-219ENST00000522266 ANP32CO43423 234 aa31.31■■■□□ 2.6
REPIN1-219ENST00000522266 PNNQ9H307 717 aaKnown RBP31.31■■■□□ 2.6
REPIN1-219ENST00000522266 NHSQ6T4R5 1651 aa31.3■■■□□ 2.6
REPIN1-219ENST00000522266 FCHSD2O94868 740 aa31.3■■■□□ 2.6
REPIN1-219ENST00000522266 KAT6BQ8WYB5 2073 aa31.29■■■□□ 2.6
REPIN1-219ENST00000522266 CYP27B1O15528 508 aa31.29■■■□□ 2.6
REPIN1-219ENST00000522266 HMOX1P09601 288 aa31.29■■■□□ 2.6
REPIN1-219ENST00000522266 APBA3O96018 575 aa31.28■■■□□ 2.6
REPIN1-219ENST00000522266 U2AF1L5P0DN76 240 aaPredicted RBP31.28■■■□□ 2.6
REPIN1-219ENST00000522266 U2AF1Q01081 240 aaKnown RBP eCLIP31.28■■■□□ 2.61e-8■■■□□ 16.3
REPIN1-219ENST00000522266 PLSCR1O15162 318 aa31.27■■■□□ 2.6
REPIN1-219ENST00000522266 PHKG2P15735 406 aa31.27■■■□□ 2.6
REPIN1-219ENST00000522266 C1orf141Q5JVX7 400 aa31.27■■■□□ 2.6
REPIN1-219ENST00000522266 NEFMP07197 916 aa31.25■■■□□ 2.59
REPIN1-219ENST00000522266 ZNF530Q6P9A1 599 aaPredicted RBP31.24■■■□□ 2.59
REPIN1-219ENST00000522266 RGPD3A6NKT7 1758 aaPredicted RBP31.24■■■□□ 2.59
REPIN1-219ENST00000522266 RGPD4Q7Z3J3 1758 aa31.24■■■□□ 2.59
REPIN1-219ENST00000522266 DCAF5Q96JK2 942 aa31.23■■■□□ 2.59
REPIN1-219ENST00000522266 AKAP4Q5JQC9 854 aa31.22■■■□□ 2.59
REPIN1-219ENST00000522266 DOT1LQ8TEK3 1739 aa31.21■■■□□ 2.59
REPIN1-219ENST00000522266 GAS2L2Q8NHY3 880 aa31.21■■■□□ 2.59
REPIN1-219ENST00000522266 ACSBG1Q96GR2 724 aa31.21■■■□□ 2.59
REPIN1-219ENST00000522266 RSPH6AQ9H0K4 717 aa31.21■■■□□ 2.59
REPIN1-219ENST00000522266 HMGB2P26583 209 aaKnown RBP31.2■■■□□ 2.59
REPIN1-219ENST00000522266 PRIM1P49642 420 aaKnown RBP31.19■■■□□ 2.58
REPIN1-219ENST00000522266 ERVV-2B6SEH9 535 aa31.18■■■□□ 2.58
REPIN1-219ENST00000522266 KCNQ2O43526 872 aa31.18■■■□□ 2.58
REPIN1-219ENST00000522266 DEFB132Q7Z7B7 95 aa31.18■■■□□ 2.58
REPIN1-219ENST00000522266 PRKAR2BP31323 418 aa31.17■■■□□ 2.58
REPIN1-219ENST00000522266 SYTL4Q96C24 671 aaPredicted RBP31.17■■■□□ 2.58
REPIN1-219ENST00000522266 CAMKK2Q96RR4 588 aa31.17■■■□□ 2.58
REPIN1-219ENST00000522266 EN1Q05925 392 aaPredicted RBP31.16■■■□□ 2.58
REPIN1-219ENST00000522266 BTAF1O14981 1849 aa31.16■■■□□ 2.58
REPIN1-219ENST00000522266 WDR43Q15061 677 aaKnown RBP eCLIP31.14■■■□□ 2.583e-7■■■■□ 24.7
REPIN1-219ENST00000522266 MTHFSDQ2M296 383 aaKnown RBP31.14■■■□□ 2.58
REPIN1-219ENST00000522266 ITGB4P16144 1822 aa31.13■■■□□ 2.57
REPIN1-219ENST00000522266 TMOD3Q9NYL9 352 aa31.11■■■□□ 2.57
REPIN1-219ENST00000522266 EZH2Q15910 746 aaKnown RBP31.1■■■□□ 2.57
REPIN1-219ENST00000522266 SMARCC1Q92922 1105 aaPredicted RBP31.1■■■□□ 2.57
REPIN1-219ENST00000522266 MPRIPQ6WCQ1 1025 aa31.09■■■□□ 2.57
REPIN1-219ENST00000522266 PTF1AQ7RTS3 328 aa31.09■■■□□ 2.57
REPIN1-219ENST00000522266 SCN11AQ9UI33 1791 aa31.09■■■□□ 2.57
REPIN1-219ENST00000522266 TOGARAM1Q9Y4F4 1720 aa31.09■■■□□ 2.57
REPIN1-219ENST00000522266 MAPK8IP3Q9UPT6 1336 aa31.08■■■□□ 2.57
REPIN1-219ENST00000522266 GNAT3A8MTJ3 354 aa31.08■■■□□ 2.57
REPIN1-219ENST00000522266 RREB1Q92766 1687 aa31.07■■■□□ 2.56
REPIN1-219ENST00000522266 HTATSF1O43719 755 aaKnown RBP31.07■■■□□ 2.56
REPIN1-219ENST00000522266 MAP3K5Q99683 1374 aa31.06■■■□□ 2.56
REPIN1-219ENST00000522266 CABP4P57796 275 aa31.06■■■□□ 2.56
REPIN1-219ENST00000522266 SLC27A3Q5K4L6 730 aa31.06■■■□□ 2.56
REPIN1-219ENST00000522266 PHACTR3Q96KR7 559 aa31.06■■■□□ 2.56
REPIN1-219ENST00000522266 PLEKHF1Q96S99 279 aa31.06■■■□□ 2.56
REPIN1-219ENST00000522266 KDM6AO15550 1401 aaPredicted RBP31.05■■■□□ 2.56
REPIN1-219ENST00000522266 TXNRD1Q16881 649 aa31.04■■■□□ 2.56
REPIN1-219ENST00000522266 NBPF14Q5TI25 921 aa31.04■■■□□ 2.56
REPIN1-219ENST00000522266 PIGBQ92521 554 aa31.04■■■□□ 2.56
REPIN1-219ENST00000522266 ADAMTS7Q9UKP4 1686 aa31.03■■■□□ 2.56
REPIN1-219ENST00000522266 VIRMAQ69YN4 1812 aaKnown RBP31.03■■■□□ 2.56
REPIN1-219ENST00000522266 RNMTO43148 476 aaKnown RBP31.02■■■□□ 2.56
REPIN1-219ENST00000522266 RTF1Q92541 710 aaKnown RBP31.02■■■□□ 2.56
REPIN1-219ENST00000522266 LY75O60449 1722 aa31.01■■■□□ 2.56
REPIN1-219ENST00000522266 SLC52A2Q9HAB3 445 aa30.99■■■□□ 2.55
REPIN1-219ENST00000522266 RUNDC1Q96C34 613 aa30.98■■■□□ 2.55
REPIN1-219ENST00000522266 MRS2Q9HD23 443 aa30.98■■■□□ 2.55
REPIN1-219ENST00000522266 ADAMTS8Q9UP79 889 aa30.98■■■□□ 2.55
REPIN1-219ENST00000522266 NUP188Q5SRE5 1749 aa30.98■■■□□ 2.55
REPIN1-219ENST00000522266 MRC1P22897 1456 aa30.97■■■□□ 2.55
REPIN1-219ENST00000522266 NFE2L2Q16236 605 aa30.97■■■□□ 2.55
REPIN1-219ENST00000522266 PROM2Q8N271 834 aa30.97■■■□□ 2.55
REPIN1-219ENST00000522266 NFATC2IPQ8NCF5 419 aa30.97■■■□□ 2.55
REPIN1-219ENST00000522266 PALLDQ8WX93 1383 aa30.96■■■□□ 2.55
REPIN1-219ENST00000522266 TEFQ10587 303 aa30.96■■■□□ 2.55
REPIN1-219ENST00000522266 LGR6Q9HBX8 967 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms