RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
CLK4-209ENST00000521621 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
CLK4-209ENST00000521621 BAG6P46379 1132 aa12.84□□□□□ -0.35
CLK4-209ENST00000521621 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
CLK4-209ENST00000521621 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
CLK4-209ENST00000521621 LY75O60449 1722 aa12.84□□□□□ -0.35
CLK4-209ENST00000521621 BTAF1O14981 1849 aa12.83□□□□□ -0.36
CLK4-209ENST00000521621 A0A0G2JS52 829 aa12.83□□□□□ -0.36
CLK4-209ENST00000521621 MYT1Q01538 1121 aa12.83□□□□□ -0.36
CLK4-209ENST00000521621 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
CLK4-209ENST00000521621 QSER1Q2KHR3 1735 aa12.83□□□□□ -0.36
CLK4-209ENST00000521621 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
CLK4-209ENST00000521621 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
CLK4-209ENST00000521621 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
CLK4-209ENST00000521621 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
CLK4-209ENST00000521621 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
CLK4-209ENST00000521621 RALBP1Q15311 655 aa12.81□□□□□ -0.36
CLK4-209ENST00000521621 MTHFSP49914 203 aa12.81□□□□□ -0.36
CLK4-209ENST00000521621 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
CLK4-209ENST00000521621 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
CLK4-209ENST00000521621 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
CLK4-209ENST00000521621 ITGB4P16144 1822 aa12.8□□□□□ -0.36
CLK4-209ENST00000521621 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
CLK4-209ENST00000521621 CC2D1BQ5T0F9 858 aaKnown RBP12.79□□□□□ -0.36
CLK4-209ENST00000521621 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
CLK4-209ENST00000521621 MRC1P22897 1456 aa12.78□□□□□ -0.36
CLK4-209ENST00000521621 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
CLK4-209ENST00000521621 CFAP53Q96M91 514 aa12.78□□□□□ -0.36
CLK4-209ENST00000521621 TRIM37O94972 964 aa12.77□□□□□ -0.36
CLK4-209ENST00000521621 LRP5O75197 1615 aa12.77□□□□□ -0.37
CLK4-209ENST00000521621 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.37
CLK4-209ENST00000521621 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.37
CLK4-209ENST00000521621 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
CLK4-209ENST00000521621 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
CLK4-209ENST00000521621 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
CLK4-209ENST00000521621 CYP27B1O15528 508 aa12.75□□□□□ -0.37
CLK4-209ENST00000521621 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
CLK4-209ENST00000521621 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CLK4-209ENST00000521621 APBA3O96018 575 aa12.75□□□□□ -0.37
CLK4-209ENST00000521621 PHKG2P15735 406 aa12.75□□□□□ -0.37
CLK4-209ENST00000521621 FAM182BQ5T319 152 aa12.75□□□□□ -0.37
CLK4-209ENST00000521621 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
CLK4-209ENST00000521621 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
CLK4-209ENST00000521621 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
CLK4-209ENST00000521621 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
CLK4-209ENST00000521621 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
CLK4-209ENST00000521621 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
CLK4-209ENST00000521621 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
CLK4-209ENST00000521621 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
CLK4-209ENST00000521621 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
CLK4-209ENST00000521621 C5P01031 1676 aa12.72□□□□□ -0.37
CLK4-209ENST00000521621 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
CLK4-209ENST00000521621 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
CLK4-209ENST00000521621 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
CLK4-209ENST00000521621 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
CLK4-209ENST00000521621 FCHSD2O94868 740 aa12.71□□□□□ -0.37
CLK4-209ENST00000521621 EZH2Q15910 746 aaKnown RBP12.71□□□□□ -0.37
CLK4-209ENST00000521621 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
CLK4-209ENST00000521621 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
CLK4-209ENST00000521621 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.38
CLK4-209ENST00000521621 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.38
CLK4-209ENST00000521621 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
CLK4-209ENST00000521621 KCNQ2O43526 872 aa12.69□□□□□ -0.38
CLK4-209ENST00000521621 DDX10Q13206 875 aaKnown RBP12.69□□□□□ -0.38
CLK4-209ENST00000521621 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
CLK4-209ENST00000521621 PROM2Q8N271 834 aa12.69□□□□□ -0.38
CLK4-209ENST00000521621 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
CLK4-209ENST00000521621 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
CLK4-209ENST00000521621 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
CLK4-209ENST00000521621 HTATSF1O43719 755 aaKnown RBP12.69□□□□□ -0.38
CLK4-209ENST00000521621 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
CLK4-209ENST00000521621 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
CLK4-209ENST00000521621 TXNRD1Q16881 649 aa12.68□□□□□ -0.38
CLK4-209ENST00000521621 PRKRIP1Q9H875 184 aaPredicted RBP12.68□□□□□ -0.38
CLK4-209ENST00000521621 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
CLK4-209ENST00000521621 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
CLK4-209ENST00000521621 EP400Q96L91 3159 aa12.67□□□□□ -0.38
CLK4-209ENST00000521621 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
CLK4-209ENST00000521621 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
CLK4-209ENST00000521621 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
CLK4-209ENST00000521621 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
CLK4-209ENST00000521621 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
CLK4-209ENST00000521621 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
CLK4-209ENST00000521621 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
CLK4-209ENST00000521621 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
CLK4-209ENST00000521621 TJP1Q07157 1748 aa12.65□□□□□ -0.38
CLK4-209ENST00000521621 PALLDQ8WX93 1383 aa12.65□□□□□ -0.39
CLK4-209ENST00000521621 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
CLK4-209ENST00000521621 PIGBQ92521 554 aa12.64□□□□□ -0.39
CLK4-209ENST00000521621 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
CLK4-209ENST00000521621 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
CLK4-209ENST00000521621 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
CLK4-209ENST00000521621 KCPQ6ZWJ8 1503 aa12.63□□□□□ -0.39
CLK4-209ENST00000521621 DLG5Q8TDM6 1919 aa12.63□□□□□ -0.39
CLK4-209ENST00000521621 HMOX1P09601 288 aa12.63□□□□□ -0.39
CLK4-209ENST00000521621 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
CLK4-209ENST00000521621 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
CLK4-209ENST00000521621 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
CLK4-209ENST00000521621 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
CLK4-209ENST00000521621 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms