RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 BCL9O00512 1426 aa18.55■□□□□ 0.56
CTNNA1-226ENST00000521368 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
CTNNA1-226ENST00000521368 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
CTNNA1-226ENST00000521368 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.56
CTNNA1-226ENST00000521368 CCDC125Q86Z20 511 aa18.51■□□□□ 0.55
CTNNA1-226ENST00000521368 UPF1Q92900 1129 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTNNA1-226ENST00000521368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.554e-8■□□□□ 10.7
CTNNA1-226ENST00000521368 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
CTNNA1-226ENST00000521368 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
CTNNA1-226ENST00000521368 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
CTNNA1-226ENST00000521368 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
CTNNA1-226ENST00000521368 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
CTNNA1-226ENST00000521368 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
CTNNA1-226ENST00000521368 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
CTNNA1-226ENST00000521368 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
CTNNA1-226ENST00000521368 TNS1Q9HBL0 1735 aaKnown RBP18.47■□□□□ 0.55
CTNNA1-226ENST00000521368 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
CTNNA1-226ENST00000521368 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
CTNNA1-226ENST00000521368 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
CTNNA1-226ENST00000521368 NHSQ6T4R5 1651 aa18.46■□□□□ 0.55
CTNNA1-226ENST00000521368 ANP32CO43423 234 aa18.45■□□□□ 0.54
CTNNA1-226ENST00000521368 HMOX1P09601 288 aa18.44■□□□□ 0.54
CTNNA1-226ENST00000521368 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
CTNNA1-226ENST00000521368 CYP27B1O15528 508 aa18.43■□□□□ 0.54
CTNNA1-226ENST00000521368 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
CTNNA1-226ENST00000521368 TRIM37O94972 964 aa18.42■□□□□ 0.54
CTNNA1-226ENST00000521368 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
CTNNA1-226ENST00000521368 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
CTNNA1-226ENST00000521368 SF3B2Q13435 895 aaKnown RBP18.42■□□□□ 0.54
CTNNA1-226ENST00000521368 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
CTNNA1-226ENST00000521368 IFNL2Q8IZJ0 200 aa18.42■□□□□ 0.54
CTNNA1-226ENST00000521368 FCHSD2O94868 740 aa18.41■□□□□ 0.54
CTNNA1-226ENST00000521368 PHKG2P15735 406 aa18.41■□□□□ 0.54
CTNNA1-226ENST00000521368 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
CTNNA1-226ENST00000521368 BCL11BQ9C0K0 894 aaPredicted RBP18.4■□□□□ 0.54
CTNNA1-226ENST00000521368 RGPD3A6NKT7 1758 aaPredicted RBP18.4■□□□□ 0.54
CTNNA1-226ENST00000521368 RGPD4Q7Z3J3 1758 aa18.4■□□□□ 0.54
CTNNA1-226ENST00000521368 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
CTNNA1-226ENST00000521368 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
CTNNA1-226ENST00000521368 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
CTNNA1-226ENST00000521368 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
CTNNA1-226ENST00000521368 BAG6P46379 1132 aa18.37■□□□□ 0.53
CTNNA1-226ENST00000521368 BTAF1O14981 1849 aa18.36■□□□□ 0.53
CTNNA1-226ENST00000521368 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
CTNNA1-226ENST00000521368 C1orf141Q5JVX7 400 aa18.36■□□□□ 0.53
CTNNA1-226ENST00000521368 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
CTNNA1-226ENST00000521368 PNNQ9H307 717 aaKnown RBP18.36■□□□□ 0.53
CTNNA1-226ENST00000521368 KCNQ2O43526 872 aa18.35■□□□□ 0.53
CTNNA1-226ENST00000521368 MTHFSDQ2M296 383 aaKnown RBP18.35■□□□□ 0.53
CTNNA1-226ENST00000521368 GAS2L2Q8NHY3 880 aa18.35■□□□□ 0.53
CTNNA1-226ENST00000521368 DCAF5Q96JK2 942 aa18.35■□□□□ 0.53
CTNNA1-226ENST00000521368 ITGB4P16144 1822 aa18.35■□□□□ 0.53
CTNNA1-226ENST00000521368 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
CTNNA1-226ENST00000521368 PLSCR1O15162 318 aa18.34■□□□□ 0.53
CTNNA1-226ENST00000521368 APBA3O96018 575 aa18.34■□□□□ 0.53
CTNNA1-226ENST00000521368 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
CTNNA1-226ENST00000521368 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
CTNNA1-226ENST00000521368 PRIM1P49642 420 aaKnown RBP18.33■□□□□ 0.52
CTNNA1-226ENST00000521368 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
CTNNA1-226ENST00000521368 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.52
CTNNA1-226ENST00000521368 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.52
CTNNA1-226ENST00000521368 RREB1Q92766 1687 aa18.32■□□□□ 0.52
CTNNA1-226ENST00000521368 NEFMP07197 916 aa18.32■□□□□ 0.52
CTNNA1-226ENST00000521368 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
CTNNA1-226ENST00000521368 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
CTNNA1-226ENST00000521368 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
CTNNA1-226ENST00000521368 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
CTNNA1-226ENST00000521368 SYTL4Q96C24 671 aaPredicted RBP18.31■□□□□ 0.52
CTNNA1-226ENST00000521368 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
CTNNA1-226ENST00000521368 CAMKK2Q96RR4 588 aa18.3■□□□□ 0.52
CTNNA1-226ENST00000521368 KAT6BQ8WYB5 2073 aa18.29■□□□□ 0.52
CTNNA1-226ENST00000521368 MRC1P22897 1456 aa18.29■□□□□ 0.52
CTNNA1-226ENST00000521368 EN1Q05925 392 aaPredicted RBP18.29■□□□□ 0.52
CTNNA1-226ENST00000521368 CCDC184Q52MB2 194 aa18.29■□□□□ 0.52
CTNNA1-226ENST00000521368 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 MRS2Q9HD23 443 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 LY75O60449 1722 aa18.28■□□□□ 0.52
CTNNA1-226ENST00000521368 EZH2Q15910 746 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-226ENST00000521368 RNMTO43148 476 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-226ENST00000521368 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-226ENST00000521368 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-226ENST00000521368 PIGBQ92521 554 aa18.26■□□□□ 0.51
CTNNA1-226ENST00000521368 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
CTNNA1-226ENST00000521368 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
CTNNA1-226ENST00000521368 CABP4P57796 275 aa18.25■□□□□ 0.51
CTNNA1-226ENST00000521368 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
CTNNA1-226ENST00000521368 RUNDC1Q96C34 613 aa18.25■□□□□ 0.51
CTNNA1-226ENST00000521368 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
CTNNA1-226ENST00000521368 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
CTNNA1-226ENST00000521368 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
CTNNA1-226ENST00000521368 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
CTNNA1-226ENST00000521368 LGR6Q9HBX8 967 aa18.24■□□□□ 0.51
CTNNA1-226ENST00000521368 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
CTNNA1-226ENST00000521368 TXNRD1Q16881 649 aa18.23■□□□□ 0.51
CTNNA1-226ENST00000521368 PAPPAQ13219 1627 aa18.23■□□□□ 0.51
CTNNA1-226ENST00000521368 PALLDQ8WX93 1383 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms