RNA–Protein interactions for RNA: ENST00000521344.1

PCMTD1-206, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3 BASIC

Gene PCMTD1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-206ENST00000521344 CDCA7Q9BWT1 371 aaPredicted RBP22.93■■□□□ 1.26
PCMTD1-206ENST00000521344 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
PCMTD1-206ENST00000521344 OVOS2A0A0G2JMS6 1433 aa22.92■■□□□ 1.26
PCMTD1-206ENST00000521344 PLEKHF1Q96S99 279 aa22.91■■□□□ 1.26
PCMTD1-206ENST00000521344 PKD1L3Q7Z443 1732 aa22.91■■□□□ 1.26
PCMTD1-206ENST00000521344 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
PCMTD1-206ENST00000521344 PHACTR3Q96KR7 559 aa22.9■■□□□ 1.26
PCMTD1-206ENST00000521344 SHANK3Q9BYB0 1731 aa22.9■■□□□ 1.26
PCMTD1-206ENST00000521344 LRRC37A3O60309 1634 aa22.9■■□□□ 1.26
PCMTD1-206ENST00000521344 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.26
PCMTD1-206ENST00000521344 BRWD3Q6RI45 1802 aa22.89■■□□□ 1.25
PCMTD1-206ENST00000521344 A0A0G2JS52 829 aa22.88■■□□□ 1.25
PCMTD1-206ENST00000521344 MYT1Q01538 1121 aa22.88■■□□□ 1.25
PCMTD1-206ENST00000521344 PLEKHG2Q9H7P9 1386 aa22.88■■□□□ 1.25
PCMTD1-206ENST00000521344 SEPT12Q8IYM1 358 aa22.88■■□□□ 1.25
PCMTD1-206ENST00000521344 EXOC5O00471 708 aa22.87■■□□□ 1.25
PCMTD1-206ENST00000521344 DDB1Q16531 1140 aa22.87■■□□□ 1.25
PCMTD1-206ENST00000521344 ZCRB1Q8TBF4 217 aaKnown RBP22.87■■□□□ 1.25
PCMTD1-206ENST00000521344 AMOTQ4VCS5 1084 aa22.86■■□□□ 1.25
PCMTD1-206ENST00000521344 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
PCMTD1-206ENST00000521344 RUNDC1Q96C34 613 aa22.86■■□□□ 1.25
PCMTD1-206ENST00000521344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.86■■□□□ 1.253e-6■□□□□ 9.4
PCMTD1-206ENST00000521344 NEFMP07197 916 aa22.85■■□□□ 1.25
PCMTD1-206ENST00000521344 SPG7Q9UQ90 795 aa22.85■■□□□ 1.25
PCMTD1-206ENST00000521344 DLG5Q8TDM6 1919 aa22.85■■□□□ 1.25
PCMTD1-206ENST00000521344 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
PCMTD1-206ENST00000521344 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
PCMTD1-206ENST00000521344 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
PCMTD1-206ENST00000521344 RGS12O14924 1447 aa22.82■■□□□ 1.24
PCMTD1-206ENST00000521344 DDX54Q8TDD1 881 aaKnown RBP22.82■■□□□ 1.24
PCMTD1-206ENST00000521344 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
PCMTD1-206ENST00000521344 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
PCMTD1-206ENST00000521344 VIRMAQ69YN4 1812 aaKnown RBP22.81■■□□□ 1.24
PCMTD1-206ENST00000521344 CYP27B1O15528 508 aa22.8■■□□□ 1.24
PCMTD1-206ENST00000521344 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
PCMTD1-206ENST00000521344 ZNF530Q6P9A1 599 aaPredicted RBP22.8■■□□□ 1.24
PCMTD1-206ENST00000521344 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
PCMTD1-206ENST00000521344 APAF1O14727 1248 aa22.79■■□□□ 1.24
PCMTD1-206ENST00000521344 KAT6BQ8WYB5 2073 aa22.79■■□□□ 1.24
PCMTD1-206ENST00000521344 PHKG2P15735 406 aa22.78■■□□□ 1.24
PCMTD1-206ENST00000521344 NFE2L2Q16236 605 aa22.78■■□□□ 1.24
PCMTD1-206ENST00000521344 IFNL2Q8IZJ0 200 aa22.78■■□□□ 1.24
PCMTD1-206ENST00000521344 MARCH10Q8NA82 808 aaPredicted RBP22.78■■□□□ 1.24
PCMTD1-206ENST00000521344 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
PCMTD1-206ENST00000521344 EP400Q96L91 3159 aa22.77■■□□□ 1.24
PCMTD1-206ENST00000521344 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.23
PCMTD1-206ENST00000521344 AKAP4Q5JQC9 854 aa22.77■■□□□ 1.23
PCMTD1-206ENST00000521344 C1orf141Q5JVX7 400 aa22.77■■□□□ 1.23
PCMTD1-206ENST00000521344 RRP7AQ9Y3A4 280 aaKnown RBP22.77■■□□□ 1.23
PCMTD1-206ENST00000521344 KRT27Q7Z3Y8 459 aa22.76■■□□□ 1.23
PCMTD1-206ENST00000521344 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
PCMTD1-206ENST00000521344 RIPK4P57078 832 aa22.74■■□□□ 1.23
PCMTD1-206ENST00000521344 SCN11AQ9UI33 1791 aa22.74■■□□□ 1.23
PCMTD1-206ENST00000521344 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
PCMTD1-206ENST00000521344 FAM182BQ5T319 152 aa22.74■■□□□ 1.23
PCMTD1-206ENST00000521344 MAP3K5Q99683 1374 aa22.73■■□□□ 1.23
PCMTD1-206ENST00000521344 NKX1-1Q15270 411 aaPredicted RBP22.73■■□□□ 1.23
PCMTD1-206ENST00000521344 MPRIPQ6WCQ1 1025 aa22.71■■□□□ 1.23
PCMTD1-206ENST00000521344 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
PCMTD1-206ENST00000521344 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
PCMTD1-206ENST00000521344 SBF2Q86WG5 1849 aa22.71■■□□□ 1.23
PCMTD1-206ENST00000521344 TOGARAM1Q9Y4F4 1720 aa22.7■■□□□ 1.22
PCMTD1-206ENST00000521344 DCAF5Q96JK2 942 aa22.7■■□□□ 1.22
PCMTD1-206ENST00000521344 DOT1LQ8TEK3 1739 aa22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 HTATSF1O43719 755 aaKnown RBP22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 RTF1Q92541 710 aaKnown RBP22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 LGR6Q9HBX8 967 aa22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 TRIM35Q9UPQ4 493 aa22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 ITGB4P16144 1822 aa22.69■■□□□ 1.22
PCMTD1-206ENST00000521344 IL17REQ8NFR9 667 aa22.68■■□□□ 1.22
PCMTD1-206ENST00000521344 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
PCMTD1-206ENST00000521344 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
PCMTD1-206ENST00000521344 MCM10Q7L590 875 aa22.68■■□□□ 1.22
PCMTD1-206ENST00000521344 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
PCMTD1-206ENST00000521344 BCL9O00512 1426 aa22.66■■□□□ 1.22
PCMTD1-206ENST00000521344 LMOD3Q0VAK6 560 aa22.66■■□□□ 1.22
PCMTD1-206ENST00000521344 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
PCMTD1-206ENST00000521344 FAM196AQ6ZSG2 479 aa22.65■■□□□ 1.22
PCMTD1-206ENST00000521344 CEMIPQ8WUJ3 1361 aa22.64■■□□□ 1.22
PCMTD1-206ENST00000521344 CCDC27Q2M243 656 aa22.64■■□□□ 1.21
PCMTD1-206ENST00000521344 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
PCMTD1-206ENST00000521344 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
PCMTD1-206ENST00000521344 THUMPD2Q9BTF0 503 aaKnown RBP22.64■■□□□ 1.21
PCMTD1-206ENST00000521344 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
PCMTD1-206ENST00000521344 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
PCMTD1-206ENST00000521344 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
PCMTD1-206ENST00000521344 WWC1Q8IX03 1113 aa22.62■■□□□ 1.21
PCMTD1-206ENST00000521344 PRIM1P49642 420 aaKnown RBP22.62■■□□□ 1.21
PCMTD1-206ENST00000521344 NHSQ6T4R5 1651 aa22.62■■□□□ 1.21
PCMTD1-206ENST00000521344 MRC1P22897 1456 aa22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 KCNQ2O43526 872 aa22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 NFATC2IPQ8NCF5 419 aa22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 SLC52A2Q9HAB3 445 aa22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 CABP4P57796 275 aa22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 TEFQ10587 303 aa22.6■■□□□ 1.21
PCMTD1-206ENST00000521344 TMOD3Q9NYL9 352 aa22.58■■□□□ 1.21
PCMTD1-206ENST00000521344 PTF1AQ7RTS3 328 aa22.57■■□□□ 1.2
PCMTD1-206ENST00000521344 BTAF1O14981 1849 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms