RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 EMILIN1Q9Y6C2 1016 aa28.3■■■□□ 2.12
SNHG6-203ENST00000520944 MYOM1P52179 1685 aa28.29■■■□□ 2.12
SNHG6-203ENST00000520944 NHSQ6T4R5 1651 aa28.29■■■□□ 2.12
SNHG6-203ENST00000520944 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
SNHG6-203ENST00000520944 PRIM1P49642 420 aaKnown RBP28.27■■■□□ 2.12
SNHG6-203ENST00000520944 MEGF6O75095 1541 aa28.27■■■□□ 2.12
SNHG6-203ENST00000520944 PANK3Q9H999 370 aa28.25■■■□□ 2.11
SNHG6-203ENST00000520944 KAT6BQ8WYB5 2073 aa28.25■■■□□ 2.11
SNHG6-203ENST00000520944 PDGFDQ9GZP0 370 aaPredicted RBP28.23■■■□□ 2.11
SNHG6-203ENST00000520944 WASHC2AQ641Q2 1341 aa28.22■■■□□ 2.11
SNHG6-203ENST00000520944 ZBTB7AO95365 584 aa28.22■■■□□ 2.11
SNHG6-203ENST00000520944 SLC27A3Q5K4L6 730 aa28.22■■■□□ 2.11
SNHG6-203ENST00000520944 TNNT2P45379 298 aaPredicted RBP28.21■■■□□ 2.11
SNHG6-203ENST00000520944 RGPD2P0DJD1 1756 aa28.21■■■□□ 2.11
SNHG6-203ENST00000520944 LRRC4BQ9NT99 713 aa28.2■■■□□ 2.1
SNHG6-203ENST00000520944 POLKQ9UBT6 870 aa28.2■■■□□ 2.1
SNHG6-203ENST00000520944 PCDH11XQ9BZA7 1347 aa28.19■■■□□ 2.1
SNHG6-203ENST00000520944 PCDH11YQ9BZA8 1340 aa28.19■■■□□ 2.1
SNHG6-203ENST00000520944 BTAF1O14981 1849 aa28.18■■■□□ 2.1
SNHG6-203ENST00000520944 ATF5Q9Y2D1 282 aaPredicted RBP28.18■■■□□ 2.1
SNHG6-203ENST00000520944 EYA1Q99502 592 aa28.14■■■□□ 2.1
SNHG6-203ENST00000520944 MTFR1LQ9H019 292 aa28.14■■■□□ 2.1
SNHG6-203ENST00000520944 SPG7Q9UQ90 795 aa28.14■■■□□ 2.1
SNHG6-203ENST00000520944 ZNF827Q17R98 1081 aa28.13■■■□□ 2.09
SNHG6-203ENST00000520944 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
SNHG6-203ENST00000520944 KNSTRNQ9Y448 316 aa28.12■■■□□ 2.09
SNHG6-203ENST00000520944 NSD2O96028 1365 aa28.11■■■□□ 2.09
SNHG6-203ENST00000520944 CASZ1Q86V15 1759 aa28.11■■■□□ 2.09
SNHG6-203ENST00000520944 CYP27B1O15528 508 aa28.11■■■□□ 2.09
SNHG6-203ENST00000520944 PTGER2P43116 358 aa28.11■■■□□ 2.09
SNHG6-203ENST00000520944 KCNQ4P56696 695 aa28.11■■■□□ 2.09
SNHG6-203ENST00000520944 AKT1S1Q96B36 256 aa28.11■■■□□ 2.09
SNHG6-203ENST00000520944 MORC1Q86VD1 984 aa28.1■■■□□ 2.09
SNHG6-203ENST00000520944 TFCP2L1Q9NZI6 479 aa28.1■■■□□ 2.09
SNHG6-203ENST00000520944 CCNL1Q9UK58 526 aaPredicted RBP28.1■■■□□ 2.09
SNHG6-203ENST00000520944 EIF4A2Q14240 407 aaKnown RBP28.09■■■□□ 2.09
SNHG6-203ENST00000520944 MPRIPQ6WCQ1 1025 aa28.08■■■□□ 2.09
SNHG6-203ENST00000520944 SHANK3Q9BYB0 1731 aa28.08■■■□□ 2.09
SNHG6-203ENST00000520944 DOT1LQ8TEK3 1739 aa28.07■■■□□ 2.08
SNHG6-203ENST00000520944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.07■■■□□ 2.085e-10■□□□□ 10.5
SNHG6-203ENST00000520944 HMGB2P26583 209 aaKnown RBP28.06■■■□□ 2.08
SNHG6-203ENST00000520944 NCAPD2Q15021 1401 aa28.06■■■□□ 2.08
SNHG6-203ENST00000520944 PAPPAQ13219 1627 aa28.06■■■□□ 2.08
SNHG6-203ENST00000520944 MAP2P11137 1827 aaKnown RBP28.06■■■□□ 2.08
SNHG6-203ENST00000520944 SLC16A10Q8TF71 515 aa28.04■■■□□ 2.08
SNHG6-203ENST00000520944 ANKRD26Q9UPS8 1709 aa28.04■■■□□ 2.08
SNHG6-203ENST00000520944 NKX1-1Q15270 411 aaPredicted RBP28.03■■■□□ 2.08
SNHG6-203ENST00000520944 KIF7Q2M1P5 1343 aa28.02■■■□□ 2.08
SNHG6-203ENST00000520944 IFNL2Q8IZJ0 200 aa28.02■■■□□ 2.08
SNHG6-203ENST00000520944 SMARCC1Q92922 1105 aaPredicted RBP28.01■■■□□ 2.07
SNHG6-203ENST00000520944 ARXQ96QS3 562 aa28.01■■■□□ 2.07
SNHG6-203ENST00000520944 SGIP1Q9BQI5 828 aa28.01■■■□□ 2.07
SNHG6-203ENST00000520944 PNPLA7Q6ZV29 1317 aa28■■■□□ 2.07
SNHG6-203ENST00000520944 FHDC1Q9C0D6 1143 aaPredicted RBP27.99■■■□□ 2.07
SNHG6-203ENST00000520944 PALLDQ8WX93 1383 aa27.99■■■□□ 2.07
SNHG6-203ENST00000520944 PIGBQ92521 554 aa27.98■■■□□ 2.07
SNHG6-203ENST00000520944 IGSF1Q8N6C5 1336 aa27.97■■■□□ 2.07
SNHG6-203ENST00000520944 MSH5O43196 834 aa27.97■■■□□ 2.07
SNHG6-203ENST00000520944 PHKG2P15735 406 aa27.97■■■□□ 2.07
SNHG6-203ENST00000520944 POLD1P28340 1107 aa27.97■■■□□ 2.07
SNHG6-203ENST00000520944 SYT17Q9BSW7 474 aa27.97■■■□□ 2.07
SNHG6-203ENST00000520944 TMOD3Q9NYL9 352 aa27.96■■■□□ 2.07
SNHG6-203ENST00000520944 AMER1Q5JTC6 1135 aaPredicted RBP27.95■■■□□ 2.06
SNHG6-203ENST00000520944 LY75O60449 1722 aa27.95■■■□□ 2.06
SNHG6-203ENST00000520944 PKD1L3Q7Z443 1732 aa27.95■■■□□ 2.06
SNHG6-203ENST00000520944 PLEKHO1Q53GL0 409 aaPredicted RBP27.94■■■□□ 2.06
SNHG6-203ENST00000520944 PLEKHG2Q9H7P9 1386 aa27.94■■■□□ 2.06
SNHG6-203ENST00000520944 AMOTQ4VCS5 1084 aa27.91■■■□□ 2.06
SNHG6-203ENST00000520944 HSP90AB1P08238 724 aaKnown RBP27.9■■■□□ 2.06
SNHG6-203ENST00000520944 COL23A1Q86Y22 540 aaPredicted RBP27.9■■■□□ 2.06
SNHG6-203ENST00000520944 FLAD1Q8NFF5 587 aa27.9■■■□□ 2.06
SNHG6-203ENST00000520944 YY1P25490 414 aa27.89■■■□□ 2.06
SNHG6-203ENST00000520944 AK7Q96M32 723 aa27.88■■■□□ 2.05
SNHG6-203ENST00000520944 LOC102724428A0A0B4J2F2 783 aa27.87■■■□□ 2.05
SNHG6-203ENST00000520944 PER1O15534 1290 aaPredicted RBP27.87■■■□□ 2.05
SNHG6-203ENST00000520944 SIK1P57059 783 aa27.87■■■□□ 2.05
SNHG6-203ENST00000520944 SULT6B1Q6IMI4 303 aa27.87■■■□□ 2.05
SNHG6-203ENST00000520944 ZNF530Q6P9A1 599 aaPredicted RBP27.87■■■□□ 2.05
SNHG6-203ENST00000520944 KLHL34Q8N239 644 aa27.87■■■□□ 2.05
SNHG6-203ENST00000520944 DCAF5Q96JK2 942 aa27.87■■■□□ 2.05
SNHG6-203ENST00000520944 ASAP1Q9ULH1 1129 aa27.87■■■□□ 2.05
SNHG6-203ENST00000520944 UTRNP46939 3433 aa27.86■■■□□ 2.05
SNHG6-203ENST00000520944 ERVV-2B6SEH9 535 aa27.86■■■□□ 2.05
SNHG6-203ENST00000520944 IL13P35225 146 aa27.86■■■□□ 2.05
SNHG6-203ENST00000520944 CC2D1BQ5T0F9 858 aaKnown RBP27.86■■■□□ 2.05
SNHG6-203ENST00000520944 AEBP1Q8IUX7 1158 aa27.86■■■□□ 2.05
SNHG6-203ENST00000520944 QSER1Q2KHR3 1735 aa27.86■■■□□ 2.05
SNHG6-203ENST00000520944 TOGARAM1Q9Y4F4 1720 aa27.85■■■□□ 2.05
SNHG6-203ENST00000520944 MTHFSP49914 203 aa27.85■■■□□ 2.05
SNHG6-203ENST00000520944 C1orf141Q5JVX7 400 aa27.85■■■□□ 2.05
SNHG6-203ENST00000520944 MAP3K5Q99683 1374 aa27.85■■■□□ 2.05
SNHG6-203ENST00000520944 ATG3Q9NT62 314 aa27.83■■■□□ 2.05
SNHG6-203ENST00000520944 ITGB4P16144 1822 aa27.83■■■□□ 2.05
SNHG6-203ENST00000520944 ATP6V1AP38606 617 aa27.82■■■□□ 2.04
SNHG6-203ENST00000520944 CABP4P57796 275 aa27.81■■■□□ 2.04
SNHG6-203ENST00000520944 MSL1Q68DK7 614 aa27.8■■■□□ 2.04
SNHG6-203ENST00000520944 C5P01031 1676 aa27.79■■■□□ 2.04
SNHG6-203ENST00000520944 CNGB1Q14028 1251 aaPredicted RBP27.79■■■□□ 2.04
SNHG6-203ENST00000520944 LINC00116Q8NCU8 138 aa27.79■■■□□ 2.04
SNHG6-203ENST00000520944 PHF14O94880 888 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms