RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TERF1P54274 439 aa15.54■□□□□ 0.08
TRAPPC9-208ENST00000520857 MCM10Q7L590 875 aa15.54■□□□□ 0.08
TRAPPC9-208ENST00000520857 COG3Q96JB2 828 aa15.54■□□□□ 0.08
TRAPPC9-208ENST00000520857 CEP85Q6P2H3 762 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 NME9Q86XW9 330 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 SPC24Q8NBT2 197 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 JARID2Q92833 1246 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 ZDHHC9Q9Y397 364 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 ABCC4O15439 1325 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 WAPLQ7Z5K2 1190 aa15.53■□□□□ 0.08
TRAPPC9-208ENST00000520857 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.08
TRAPPC9-208ENST00000520857 DRC7Q8IY82 874 aa15.52■□□□□ 0.08
TRAPPC9-208ENST00000520857 PDLIM2Q96JY6 352 aa15.52■□□□□ 0.08
TRAPPC9-208ENST00000520857 HCLS1P14317 486 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC9-208ENST00000520857 ATP7AQ04656 1500 aa15.52■□□□□ 0.07
TRAPPC9-208ENST00000520857 SHPRHQ149N8 1683 aa15.52■□□□□ 0.07
TRAPPC9-208ENST00000520857 DTNBO60941 627 aa15.52■□□□□ 0.07
TRAPPC9-208ENST00000520857 MAP4K4O95819 1239 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC9-208ENST00000520857 MCM2P49736 904 aa15.52■□□□□ 0.07
TRAPPC9-208ENST00000520857 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC9-208ENST00000520857 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
TRAPPC9-208ENST00000520857 STK31Q9BXU1 1019 aa15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 ADCY5O95622 1261 aa15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 CYP2E1P05181 493 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 PDE1AP54750 535 aa15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 PUS7Q96PZ0 661 aaKnown RBP15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 TET3O43151 1660 aa15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 USP48Q86UV5 1035 aa15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 ZFYVE16Q7Z3T8 1539 aa15.5■□□□□ 0.07
TRAPPC9-208ENST00000520857 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
TRAPPC9-208ENST00000520857 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-208ENST00000520857 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-208ENST00000520857 NOLC1Q14978 699 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRAPPC9-208ENST00000520857 IL1RAPL2Q9NP60 686 aa15.49■□□□□ 0.07
TRAPPC9-208ENST00000520857 WDR33Q9C0J8 1336 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-208ENST00000520857 KIF3AQ9Y496 699 aa15.48■□□□□ 0.07
TRAPPC9-208ENST00000520857 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
TRAPPC9-208ENST00000520857 KIF1BO60333 1816 aa15.48■□□□□ 0.07
TRAPPC9-208ENST00000520857 PALD1Q9ULE6 856 aa15.48■□□□□ 0.07
TRAPPC9-208ENST00000520857 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 OS9Q13438 667 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 LRRCC1Q9C099 1032 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 TSPYL4Q9UJ04 414 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 KCNJ4P48050 445 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 SMC3Q9UQE7 1217 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 GOLGA6L4A6NEF3 574 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 PODXL2Q9NZ53 605 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 NPATQ14207 1427 aa15.47■□□□□ 0.07
TRAPPC9-208ENST00000520857 MSH6P52701 1360 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 GNAI2P04899 355 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 MX1P20591 662 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 PPP4R3BQ5MIZ7 849 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 ESYT1Q9BSJ8 1104 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 CNPY2Q9Y2B0 182 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 BRD1O95696 1058 aa15.46■□□□□ 0.07
TRAPPC9-208ENST00000520857 FAM184AQ8NB25 1140 aa15.45■□□□□ 0.06
TRAPPC9-208ENST00000520857 CCDC94Q9BW85 323 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC9-208ENST00000520857 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
TRAPPC9-208ENST00000520857 GIMAP6Q6P9H5 292 aa15.45■□□□□ 0.06
TRAPPC9-208ENST00000520857 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
TRAPPC9-208ENST00000520857 CCDC183Q5T5S1 534 aa15.44■□□□□ 0.06
TRAPPC9-208ENST00000520857 IGSF3O75054 1194 aa15.44■□□□□ 0.06
TRAPPC9-208ENST00000520857 NUTM1Q86Y26 1132 aa15.44■□□□□ 0.06
TRAPPC9-208ENST00000520857 SMAP1Q8IYB5 467 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC9-208ENST00000520857 MYRIPQ8NFW9 859 aa15.44■□□□□ 0.06
TRAPPC9-208ENST00000520857 DDX54Q8TDD1 881 aaKnown RBP15.44■□□□□ 0.06
TRAPPC9-208ENST00000520857 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
TRAPPC9-208ENST00000520857 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC9-208ENST00000520857 GOLGA6L6A8MZA4 724 aa15.43■□□□□ 0.06
TRAPPC9-208ENST00000520857 IL13P35225 146 aa15.43■□□□□ 0.06
TRAPPC9-208ENST00000520857 KIAA1210Q9ULL0 1709 aa15.43■□□□□ 0.06
TRAPPC9-208ENST00000520857 MLECQ14165 292 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 G2E3Q7L622 706 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 ATP6V1DQ9Y5K8 247 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 DIAPH3Q9NSV4 1193 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 NCKAP5LQ9HCH0 1330 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
TRAPPC9-208ENST00000520857 ZNF592Q92610 1267 aa15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 TULP4Q9NRJ4 1543 aa15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 SURF6O75683 361 aaKnown RBP15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 PIBF1Q8WXW3 757 aa15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 SRCIN1Q9C0H9 1055 aa15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
TRAPPC9-208ENST00000520857 CCT4P50991 539 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 CHMLP26374 656 aa15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 FBXO31Q5XUX0 539 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 SLC52A1Q9NWF4 448 aa15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 MED14O60244 1454 aa15.4■□□□□ 0.06
TRAPPC9-208ENST00000520857 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms