RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 PLSCR1O15162 318 aa22.01■■□□□ 1.11
TNPO1-212ENST00000520850 TNS1Q9HBL0 1735 aaKnown RBP22■■□□□ 1.11
TNPO1-212ENST00000520850 DEFB132Q7Z7B7 95 aa22■■□□□ 1.11
TNPO1-212ENST00000520850 KDRP35968 1356 aa21.99■■□□□ 1.11
TNPO1-212ENST00000520850 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
TNPO1-212ENST00000520850 APBA3O96018 575 aa21.99■■□□□ 1.11
TNPO1-212ENST00000520850 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
TNPO1-212ENST00000520850 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
TNPO1-212ENST00000520850 SPG7Q9UQ90 795 aa21.99■■□□□ 1.11
TNPO1-212ENST00000520850 PCDH11XQ9BZA7 1347 aa21.99■■□□□ 1.11
TNPO1-212ENST00000520850 PCDH11YQ9BZA8 1340 aa21.99■■□□□ 1.11
TNPO1-212ENST00000520850 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
TNPO1-212ENST00000520850 PPP2R1AP30153 589 aa21.97■■□□□ 1.11
TNPO1-212ENST00000520850 NKX1-1Q15270 411 aaPredicted RBP21.97■■□□□ 1.11
TNPO1-212ENST00000520850 EN1Q05925 392 aaPredicted RBP21.96■■□□□ 1.11
TNPO1-212ENST00000520850 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
TNPO1-212ENST00000520850 SHANK3Q9BYB0 1731 aa21.96■■□□□ 1.11
TNPO1-212ENST00000520850 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
TNPO1-212ENST00000520850 RALBP1Q15311 655 aa21.95■■□□□ 1.1
TNPO1-212ENST00000520850 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
TNPO1-212ENST00000520850 CYP27B1O15528 508 aa21.94■■□□□ 1.1
TNPO1-212ENST00000520850 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
TNPO1-212ENST00000520850 COL3A1P02461 1466 aaPredicted RBP21.93■■□□□ 1.1
TNPO1-212ENST00000520850 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
TNPO1-212ENST00000520850 SULT6B1Q6IMI4 303 aa21.93■■□□□ 1.1
TNPO1-212ENST00000520850 NHSQ6T4R5 1651 aa21.93■■□□□ 1.1
TNPO1-212ENST00000520850 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
TNPO1-212ENST00000520850 KCNQ2O43526 872 aa21.92■■□□□ 1.1
TNPO1-212ENST00000520850 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
TNPO1-212ENST00000520850 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
TNPO1-212ENST00000520850 EZH2Q15910 746 aaKnown RBP21.91■■□□□ 1.1
TNPO1-212ENST00000520850 CNGB1Q14028 1251 aaPredicted RBP21.9■■□□□ 1.1
TNPO1-212ENST00000520850 PTF1AQ7RTS3 328 aa21.9■■□□□ 1.1
TNPO1-212ENST00000520850 PHKG2P15735 406 aa21.89■■□□□ 1.09
TNPO1-212ENST00000520850 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
TNPO1-212ENST00000520850 ACSBG1Q96GR2 724 aa21.89■■□□□ 1.09
TNPO1-212ENST00000520850 NUDCQ9Y266 331 aa21.89■■□□□ 1.09
TNPO1-212ENST00000520850 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
TNPO1-212ENST00000520850 PRIM1P49642 420 aaKnown RBP21.88■■□□□ 1.09
TNPO1-212ENST00000520850 PROM2Q8N271 834 aa21.85■■□□□ 1.09
TNPO1-212ENST00000520850 RREB1Q92766 1687 aa21.85■■□□□ 1.09
TNPO1-212ENST00000520850 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
TNPO1-212ENST00000520850 HMGB2P26583 209 aaKnown RBP21.84■■□□□ 1.09
TNPO1-212ENST00000520850 DCAF5Q96JK2 942 aa21.84■■□□□ 1.09
TNPO1-212ENST00000520850 ERVV-2B6SEH9 535 aa21.83■■□□□ 1.09
TNPO1-212ENST00000520850 FCHSD2O94868 740 aa21.82■■□□□ 1.08
TNPO1-212ENST00000520850 HMOX1P09601 288 aa21.82■■□□□ 1.08
TNPO1-212ENST00000520850 TXNRD1Q16881 649 aa21.82■■□□□ 1.08
TNPO1-212ENST00000520850 NBPF14Q5TI25 921 aa21.82■■□□□ 1.08
TNPO1-212ENST00000520850 BTAF1O14981 1849 aa21.82■■□□□ 1.08
TNPO1-212ENST00000520850 DOT1LQ8TEK3 1739 aa21.81■■□□□ 1.08
TNPO1-212ENST00000520850 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
TNPO1-212ENST00000520850 SLC27A3Q5K4L6 730 aa21.81■■□□□ 1.08
TNPO1-212ENST00000520850 SYTL4Q96C24 671 aaPredicted RBP21.81■■□□□ 1.08
TNPO1-212ENST00000520850 AKAP4Q5JQC9 854 aa21.8■■□□□ 1.08
TNPO1-212ENST00000520850 C1orf141Q5JVX7 400 aa21.8■■□□□ 1.08
TNPO1-212ENST00000520850 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
TNPO1-212ENST00000520850 PRKRIP1Q9H875 184 aaPredicted RBP21.8■■□□□ 1.08
TNPO1-212ENST00000520850 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
TNPO1-212ENST00000520850 SMARCC1Q92922 1105 aaPredicted RBP21.78■■□□□ 1.08
TNPO1-212ENST00000520850 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
TNPO1-212ENST00000520850 MPRIPQ6WCQ1 1025 aa21.77■■□□□ 1.08
TNPO1-212ENST00000520850 NUP188Q5SRE5 1749 aa21.77■■□□□ 1.08
TNPO1-212ENST00000520850 MTHFSDQ2M296 383 aaKnown RBP21.76■■□□□ 1.07
TNPO1-212ENST00000520850 PIGBQ92521 554 aa21.76■■□□□ 1.07
TNPO1-212ENST00000520850 ITGB4P16144 1822 aa21.76■■□□□ 1.07
TNPO1-212ENST00000520850 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
TNPO1-212ENST00000520850 U2AF1L5P0DN76 240 aaPredicted RBP21.75■■□□□ 1.07
TNPO1-212ENST00000520850 U2AF1Q01081 240 aaKnown RBP eCLIP21.75■■□□□ 1.07
TNPO1-212ENST00000520850 GAS2L2Q8NHY3 880 aa21.75■■□□□ 1.07
TNPO1-212ENST00000520850 TMOD3Q9NYL9 352 aa21.75■■□□□ 1.07
TNPO1-212ENST00000520850 PNNQ9H307 717 aaKnown RBP21.74■■□□□ 1.07
TNPO1-212ENST00000520850 LY75O60449 1722 aa21.74■■□□□ 1.07
TNPO1-212ENST00000520850 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
TNPO1-212ENST00000520850 PRKAR2BP31323 418 aa21.72■■□□□ 1.07
TNPO1-212ENST00000520850 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
TNPO1-212ENST00000520850 CABP4P57796 275 aa21.7■■□□□ 1.06
TNPO1-212ENST00000520850 PHACTR3Q96KR7 559 aa21.7■■□□□ 1.06
TNPO1-212ENST00000520850 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
TNPO1-212ENST00000520850 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
TNPO1-212ENST00000520850 R3HDM1Q15032 1099 aaKnown RBP21.69■■□□□ 1.06
TNPO1-212ENST00000520850 SLC15A2Q16348 729 aa21.69■■□□□ 1.06
TNPO1-212ENST00000520850 PALLDQ8WX93 1383 aa21.69■■□□□ 1.06
TNPO1-212ENST00000520850 ADAMTS7Q9UKP4 1686 aa21.69■■□□□ 1.06
TNPO1-212ENST00000520850 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
TNPO1-212ENST00000520850 HTATSF1O43719 755 aaKnown RBP21.68■■□□□ 1.06
TNPO1-212ENST00000520850 ATG3Q9NT62 314 aa21.68■■□□□ 1.06
TNPO1-212ENST00000520850 STK32BQ9NY57 414 aa21.68■■□□□ 1.06
TNPO1-212ENST00000520850 PAPPAQ13219 1627 aa21.67■■□□□ 1.06
TNPO1-212ENST00000520850 NFATC2IPQ8NCF5 419 aa21.67■■□□□ 1.06
TNPO1-212ENST00000520850 PLEKHF1Q96S99 279 aa21.67■■□□□ 1.06
TNPO1-212ENST00000520850 SLC52A2Q9HAB3 445 aa21.67■■□□□ 1.06
TNPO1-212ENST00000520850 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
TNPO1-212ENST00000520850 ANO8Q9HCE9 1232 aaPredicted RBP21.67■■□□□ 1.06
TNPO1-212ENST00000520850 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
TNPO1-212ENST00000520850 NEFMP07197 916 aa21.66■■□□□ 1.06
TNPO1-212ENST00000520850 AKT1S1Q96B36 256 aa21.66■■□□□ 1.06
TNPO1-212ENST00000520850 ASAP1Q9ULH1 1129 aa21.66■■□□□ 1.06
TNPO1-212ENST00000520850 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
TNPO1-212ENST00000520850 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms