RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-223ENST00000520828 DDX54Q8TDD1 881 aaKnown RBP11.62□□□□□ -0.55
PTK2-223ENST00000520828 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
PTK2-223ENST00000520828 ZNF526Q8TF50 670 aaPredicted RBP11.62□□□□□ -0.55
PTK2-223ENST00000520828 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
PTK2-223ENST00000520828 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
PTK2-223ENST00000520828 CD2APQ9Y5K6 639 aa11.6□□□□□ -0.55
PTK2-223ENST00000520828 ADCY9O60503 1353 aa11.59□□□□□ -0.55
PTK2-223ENST00000520828 USP31Q70CQ4 1352 aa11.59□□□□□ -0.55
PTK2-223ENST00000520828 ANKRD36BQ8N2N9 1353 aa11.59□□□□□ -0.55
PTK2-223ENST00000520828 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
PTK2-223ENST00000520828 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
PTK2-223ENST00000520828 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
PTK2-223ENST00000520828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■□□ 18.4
PTK2-223ENST00000520828 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
PTK2-223ENST00000520828 TUBGCP6Q96RT7 1819 aa11.58□□□□□ -0.56
PTK2-223ENST00000520828 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
PTK2-223ENST00000520828 APLP1P51693 650 aa11.56□□□□□ -0.56
PTK2-223ENST00000520828 NME9Q86XW9 330 aa11.56□□□□□ -0.56
PTK2-223ENST00000520828 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
PTK2-223ENST00000520828 NSD2O96028 1365 aa11.55□□□□□ -0.56
PTK2-223ENST00000520828 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
PTK2-223ENST00000520828 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
PTK2-223ENST00000520828 LTV1Q96GA3 475 aaPredicted RBP11.55□□□□□ -0.56
PTK2-223ENST00000520828 LY75O60449 1722 aa11.55□□□□□ -0.56
PTK2-223ENST00000520828 USP47Q96K76 1375 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 LTN1O94822 1766 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 KIF3CO14782 793 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 IP6K1Q92551 441 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 MON2Q7Z3U7 1717 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 DOT1LQ8TEK3 1739 aa11.54□□□□□ -0.56
PTK2-223ENST00000520828 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
PTK2-223ENST00000520828 ZCRB1Q8TBF4 217 aaKnown RBP11.53□□□□□ -0.56
PTK2-223ENST00000520828 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
PTK2-223ENST00000520828 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
PTK2-223ENST00000520828 HDGFL2Q7Z4V5 671 aaPredicted RBP11.52□□□□□ -0.57
PTK2-223ENST00000520828 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
PTK2-223ENST00000520828 DNAJC5GQ8N7S2 189 aa11.51□□□□□ -0.57
PTK2-223ENST00000520828 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
PTK2-223ENST00000520828 FAM208AQ9UK61 1670 aaKnown RBP11.51□□□□□ -0.57
PTK2-223ENST00000520828 ROCK2O75116 1388 aaKnown RBP11.51□□□□□ -0.57
PTK2-223ENST00000520828 TOMM70O94826 608 aa11.5□□□□□ -0.57
PTK2-223ENST00000520828 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
PTK2-223ENST00000520828 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
PTK2-223ENST00000520828 TERF2IPQ9NYB0 399 aa11.49□□□□□ -0.57
PTK2-223ENST00000520828 CD163L1Q9NR16 1453 aa11.49□□□□□ -0.57
PTK2-223ENST00000520828 ABCB7O75027 752 aa11.48□□□□□ -0.57
PTK2-223ENST00000520828 AMPHP49418 695 aa11.48□□□□□ -0.57
PTK2-223ENST00000520828 AK7Q96M32 723 aa11.48□□□□□ -0.57
PTK2-223ENST00000520828 MEGF6O75095 1541 aa11.48□□□□□ -0.57
PTK2-223ENST00000520828 C5P01031 1676 aa11.48□□□□□ -0.57
PTK2-223ENST00000520828 PALLDQ8WX93 1383 aa11.47□□□□□ -0.57
PTK2-223ENST00000520828 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
PTK2-223ENST00000520828 HOXC9P31274 260 aa11.47□□□□□ -0.57
PTK2-223ENST00000520828 SLC12A5Q9H2X9 1139 aa11.47□□□□□ -0.57
PTK2-223ENST00000520828 NSD3Q9BZ95 1437 aa11.46□□□□□ -0.57
PTK2-223ENST00000520828 MAP3K19Q56UN5 1328 aa11.46□□□□□ -0.57
PTK2-223ENST00000520828 PHF14O94880 888 aa11.46□□□□□ -0.57
PTK2-223ENST00000520828 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
PTK2-223ENST00000520828 RAPGEF4Q8WZA2 1011 aa11.46□□□□□ -0.57
PTK2-223ENST00000520828 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
PTK2-223ENST00000520828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
PTK2-223ENST00000520828 MPRIPQ6WCQ1 1025 aa11.45□□□□□ -0.58
PTK2-223ENST00000520828 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
PTK2-223ENST00000520828 COG3Q96JB2 828 aa11.45□□□□□ -0.58
PTK2-223ENST00000520828 CICQ96RK0 1608 aaPredicted RBP11.45□□□□□ -0.58
PTK2-223ENST00000520828 C4BP0C0L5 1744 aa11.44□□□□□ -0.58
PTK2-223ENST00000520828 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
PTK2-223ENST00000520828 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
PTK2-223ENST00000520828 SSFA2P28290 1259 aa11.44□□□□□ -0.58
PTK2-223ENST00000520828 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
PTK2-223ENST00000520828 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
PTK2-223ENST00000520828 KLRG1Q96E93 195 aa11.44□□□□□ -0.58
PTK2-223ENST00000520828 NMRK2Q9NPI5 230 aa11.44□□□□□ -0.58
PTK2-223ENST00000520828 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 AMIGO3Q86WK7 504 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
PTK2-223ENST00000520828 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 BCS1LQ9Y276 419 aa11.43□□□□□ -0.58
PTK2-223ENST00000520828 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
PTK2-223ENST00000520828 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
PTK2-223ENST00000520828 PRELPP51888 382 aa11.42□□□□□ -0.58
PTK2-223ENST00000520828 ARHGAP27Q6ZUM4 889 aa11.42□□□□□ -0.58
PTK2-223ENST00000520828 SMIM5Q71RC9 77 aa11.42□□□□□ -0.58
PTK2-223ENST00000520828 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
PTK2-223ENST00000520828 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
PTK2-223ENST00000520828 WDR90Q96KV7 1748 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 PXDNLA1KZ92 1463 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 MMP10P09238 476 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 FBLN1P23142 703 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 TGFB2P61812 414 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 HTRA3P83110 453 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 FSTL1Q12841 308 aa11.41□□□□□ -0.58
PTK2-223ENST00000520828 PUS7Q96PZ0 661 aaKnown RBP11.4□□□□□ -0.58
PTK2-223ENST00000520828 RGPD2P0DJD1 1756 aa11.4□□□□□ -0.58
PTK2-223ENST00000520828 A0A0G2JLW4 131 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms