RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	DDX54	Q8TDD1	881 aa	Known RBP	11.62	□□□□□ -0.55
PTK2-223	ENST00000520828	ANKRD24	Q8TF21	1146 aa		11.62	□□□□□ -0.55
PTK2-223	ENST00000520828	ZNF526	Q8TF50	670 aa	Predicted RBP	11.62	□□□□□ -0.55
PTK2-223	ENST00000520828	SYTL4	Q96C24	671 aa	Predicted RBP	11.62	□□□□□ -0.55
PTK2-223	ENST00000520828	KTN1	Q86UP2	1357 aa	Known RBP	11.62	□□□□□ -0.55
PTK2-223	ENST00000520828	CD2AP	Q9Y5K6	639 aa		11.6	□□□□□ -0.55
PTK2-223	ENST00000520828	ADCY9	O60503	1353 aa		11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	USP31	Q70CQ4	1352 aa		11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	ANKRD36B	Q8N2N9	1353 aa		11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	PRIM1	P49642	420 aa	Known RBP	11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	MSL1	Q68DK7	614 aa		11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	COL23A1	Q86Y22	540 aa	Predicted RBP	11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.59	□□□□□ -0.55	2e-6	■■■□□ 18.4
PTK2-223	ENST00000520828	CCNL1	Q9UK58	526 aa	Predicted RBP	11.59	□□□□□ -0.55
PTK2-223	ENST00000520828	TUBGCP6	Q96RT7	1819 aa		11.58	□□□□□ -0.56
PTK2-223	ENST00000520828	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.57	□□□□□ -0.56
PTK2-223	ENST00000520828	APLP1	P51693	650 aa		11.56	□□□□□ -0.56
PTK2-223	ENST00000520828	NME9	Q86XW9	330 aa		11.56	□□□□□ -0.56
PTK2-223	ENST00000520828	KAT6B	Q8WYB5	2073 aa		11.56	□□□□□ -0.56
PTK2-223	ENST00000520828	NSD2	O96028	1365 aa		11.55	□□□□□ -0.56
PTK2-223	ENST00000520828	HMGB2	P26583	209 aa	Known RBP	11.55	□□□□□ -0.56
PTK2-223	ENST00000520828	FLAD1	Q8NFF5	587 aa		11.55	□□□□□ -0.56
PTK2-223	ENST00000520828	LTV1	Q96GA3	475 aa	Predicted RBP	11.55	□□□□□ -0.56
PTK2-223	ENST00000520828	LY75	O60449	1722 aa		11.55	□□□□□ -0.56
PTK2-223	ENST00000520828	USP47	Q96K76	1375 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	LTN1	O94822	1766 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	KIF3C	O14782	793 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	IP6K1	Q92551	441 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	USP54	Q70EL1	1684 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	MON2	Q7Z3U7	1717 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	DOT1L	Q8TEK3	1739 aa		11.54	□□□□□ -0.56
PTK2-223	ENST00000520828	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.53	□□□□□ -0.56
PTK2-223	ENST00000520828	ZCRB1	Q8TBF4	217 aa	Known RBP	11.53	□□□□□ -0.56
PTK2-223	ENST00000520828	IGSF1	Q8N6C5	1336 aa		11.53	□□□□□ -0.56
PTK2-223	ENST00000520828	SBNO2	Q9Y2G9	1366 aa		11.53	□□□□□ -0.56
PTK2-223	ENST00000520828	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.52	□□□□□ -0.57
PTK2-223	ENST00000520828	WWC3	Q9ULE0	1092 aa		11.52	□□□□□ -0.57
PTK2-223	ENST00000520828	DNAJC5G	Q8N7S2	189 aa		11.51	□□□□□ -0.57
PTK2-223	ENST00000520828	TMC1	Q8TDI8	760 aa		11.51	□□□□□ -0.57
PTK2-223	ENST00000520828	FAM208A	Q9UK61	1670 aa	Known RBP	11.51	□□□□□ -0.57
PTK2-223	ENST00000520828	ROCK2	O75116	1388 aa	Known RBP	11.51	□□□□□ -0.57
PTK2-223	ENST00000520828	TOMM70	O94826	608 aa		11.5	□□□□□ -0.57
PTK2-223	ENST00000520828	EDC4	Q6P2E9	1401 aa	Known RBP	11.5	□□□□□ -0.57
PTK2-223	ENST00000520828	L3MBTL2	Q969R5	705 aa		11.49	□□□□□ -0.57
PTK2-223	ENST00000520828	TERF2IP	Q9NYB0	399 aa		11.49	□□□□□ -0.57
PTK2-223	ENST00000520828	CD163L1	Q9NR16	1453 aa		11.49	□□□□□ -0.57
PTK2-223	ENST00000520828	ABCB7	O75027	752 aa		11.48	□□□□□ -0.57
PTK2-223	ENST00000520828	AMPH	P49418	695 aa		11.48	□□□□□ -0.57
PTK2-223	ENST00000520828	AK7	Q96M32	723 aa		11.48	□□□□□ -0.57
PTK2-223	ENST00000520828	MEGF6	O75095	1541 aa		11.48	□□□□□ -0.57
PTK2-223	ENST00000520828	C5	P01031	1676 aa		11.48	□□□□□ -0.57
PTK2-223	ENST00000520828	PALLD	Q8WX93	1383 aa		11.47	□□□□□ -0.57
PTK2-223	ENST00000520828	CGNL1	Q0VF96	1302 aa		11.47	□□□□□ -0.57
PTK2-223	ENST00000520828	HOXC9	P31274	260 aa		11.47	□□□□□ -0.57
PTK2-223	ENST00000520828	SLC12A5	Q9H2X9	1139 aa		11.47	□□□□□ -0.57
PTK2-223	ENST00000520828	NSD3	Q9BZ95	1437 aa		11.46	□□□□□ -0.57
PTK2-223	ENST00000520828	MAP3K19	Q56UN5	1328 aa		11.46	□□□□□ -0.57
PTK2-223	ENST00000520828	PHF14	O94880	888 aa		11.46	□□□□□ -0.57
PTK2-223	ENST00000520828	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.46	□□□□□ -0.57
PTK2-223	ENST00000520828	RAPGEF4	Q8WZA2	1011 aa		11.46	□□□□□ -0.57
PTK2-223	ENST00000520828		A0A1W2PP64	1363 aa		11.45	□□□□□ -0.58
PTK2-223	ENST00000520828	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.45	□□□□□ -0.58
PTK2-223	ENST00000520828	MPRIP	Q6WCQ1	1025 aa		11.45	□□□□□ -0.58
PTK2-223	ENST00000520828	SMARCC1	Q92922	1105 aa	Predicted RBP	11.45	□□□□□ -0.58
PTK2-223	ENST00000520828	COG3	Q96JB2	828 aa		11.45	□□□□□ -0.58
PTK2-223	ENST00000520828	CIC	Q96RK0	1608 aa	Predicted RBP	11.45	□□□□□ -0.58
PTK2-223	ENST00000520828	C4B	P0C0L5	1744 aa		11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	MYCN	P04198	464 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	TAT	P17735	454 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	SSFA2	P28290	1259 aa		11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	TNS4	Q8IZW8	715 aa		11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	KLRG1	Q96E93	195 aa		11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	NMRK2	Q9NPI5	230 aa		11.44	□□□□□ -0.58
PTK2-223	ENST00000520828	PCDH11X	Q9BZA7	1347 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	PCDH11Y	Q9BZA8	1340 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	NBPF6	Q5VWK0	638 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	AMIGO3	Q86WK7	504 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	USHBP1	Q8N6Y0	703 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	RBM46	Q8TBY0	533 aa	Known RBP	11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	NBPF4	Q96M43	638 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	BCS1L	Q9Y276	419 aa		11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	SMG6	Q86US8	1419 aa	Known RBP	11.43	□□□□□ -0.58
PTK2-223	ENST00000520828	RTL1	A6NKG5	1358 aa		11.42	□□□□□ -0.58
PTK2-223	ENST00000520828	PRELP	P51888	382 aa		11.42	□□□□□ -0.58
PTK2-223	ENST00000520828	ARHGAP27	Q6ZUM4	889 aa		11.42	□□□□□ -0.58
PTK2-223	ENST00000520828	SMIM5	Q71RC9	77 aa		11.42	□□□□□ -0.58
PTK2-223	ENST00000520828	JMY	Q8N9B5	988 aa		11.42	□□□□□ -0.58
PTK2-223	ENST00000520828	TAF1L	Q8IZX4	1826 aa		11.42	□□□□□ -0.58
PTK2-223	ENST00000520828	WDR90	Q96KV7	1748 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	TOGARAM1	Q9Y4F4	1720 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	PXDNL	A1KZ92	1463 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	MMP10	P09238	476 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	FBLN1	P23142	703 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	TGFB2	P61812	414 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	HTRA3	P83110	453 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	FSTL1	Q12841	308 aa		11.41	□□□□□ -0.58
PTK2-223	ENST00000520828	PUS7	Q96PZ0	661 aa	Known RBP	11.4	□□□□□ -0.58
PTK2-223	ENST00000520828	RGPD2	P0DJD1	1756 aa		11.4	□□□□□ -0.58
PTK2-223	ENST00000520828		A0A0G2JLW4	131 aa		11.39	□□□□□ -0.59

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